BP912070 |
Clone id |
YMU001_000012_G01 |
Library |
YMU01 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000012_G01. |
Accession |
BP912070 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL211Contig1 |
Sequence |
ACTCGATGGCATCACTAACAAGCCCCTCCTTCAGCTGAGCTTTGGCAACCTGACTCCACA CCTCATCCTCCTCGACACGAGAGGCAAATTCAATAGCTCTTTCAATGCTGCGAATATTAT CTAGAAGCACATTAACAGCTTGCACATTCAAGTTGAACTTCTTGAAGATCGCAAAAGCCT CCTCATACAACTCTGAGCCAACAGCTATCTCTCCCACTGCAGGCCCATCAAAGTTATCCA AACGGTTCACATAATCCATTACTCGAGACCTATCAGCTTTTATGGCCGTCAAAATGAGCA AGTTTTGCAAATTTGGATTGTCACTGAATGCAGAATTCTGAAGTACTATTTTTTCAAGAA GCTCAATAAGCTCATGAGGCAAATCCGCTGTCATGAAAGCTTTAACTGTTGCTGAGACTT GTTCTGGGTTCTTACTTTCTGGCAAAGCTGTAGACACAACCTGATCAATAAGCTGTCGCC TATATGGATTTTCTGGATCCAGCACTTTAGCCCACAAATCTGGCTCCATCCTTTCAACGA TGTACCTTGCTTGAAGCTTAAAAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29742 |
Definition |
sp|P29742|CLH_DROME Clathrin heavy chain OS=Drosophila melanogaster |
Align length |
188 |
Score (bit) |
254.0 |
E-value |
2.0e-67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T0L4 |
Definition |
tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
188 |
Score (bit) |
340.0 |
E-value |
2.0e-92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912070|Adiantum capillus-veneris mRNA, clone: YMU001_000012_G01. (565 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella paten... 340 2e-92 tr|A9RFW2|A9RFW2_PHYPA Predicted protein OS=Physcomitrella paten... 336 6e-91 tr|A9U2Z4|A9U2Z4_PHYPA Predicted protein OS=Physcomitrella paten... 335 1e-90 tr|A7Q3K1|A7Q3K1_VITVI Chromosome chr13 scaffold_48, whole genom... 324 2e-87 tr|A5ACP0|A5ACP0_VITVI Putative uncharacterized protein OS=Vitis... 324 2e-87 tr|A7NYC7|A7NYC7_VITVI Chromosome chr6 scaffold_3, whole genome ... 323 4e-87 tr|Q9CA00|Q9CA00_ARATH Putative clathrin heavy chain, 3' partial... 322 7e-87 tr|Q9C6U0|Q9C6U0_ARATH Clathrin heavy chain, putative OS=Arabido... 322 7e-87 tr|Q0WLB5|Q0WLB5_ARATH Putative uncharacterized protein At3g0853... 322 7e-87 tr|Q9SRM1|Q9SRM1_ARATH Clathrin heavy chain, putative; 28833-197... 322 9e-87 tr|Q0WNJ6|Q0WNJ6_ARATH Putative uncharacterized protein At3g1113... 322 9e-87 tr|Q2RBN7|Q2RBN7_ORYSJ Clathrin heavy chain, putative, expressed... 320 3e-86 tr|Q2QYW2|Q2QYW2_ORYSJ Clathrin heavy chain, putative, expressed... 320 3e-86 tr|Q0IV90|Q0IV90_ORYSJ Os11g0104900 protein OS=Oryza sativa subs... 320 3e-86 tr|A3CE52|A3CE52_ORYSJ Putative uncharacterized protein OS=Oryza... 320 3e-86 tr|A3CE45|A3CE45_ORYSJ Putative uncharacterized protein OS=Oryza... 320 3e-86 tr|Q39834|Q39834_SOYBN Clathrin heavy chain OS=Glycine max PE=2 ... 319 8e-86 tr|A2ZH90|A2ZH90_ORYSI Putative uncharacterized protein OS=Oryza... 309 6e-83 tr|A9TN62|A9TN62_PHYPA Predicted protein OS=Physcomitrella paten... 309 8e-83 tr|A4RQV5|A4RQV5_OSTLU Predicted protein OS=Ostreococcus lucimar... 276 7e-73 tr|Q01GQ0|Q01GQ0_OSTTA Clathrin heavy chain, putative (ISS) OS=O... 272 8e-72 tr|B8BNS6|B8BNS6_ORYSI Putative uncharacterized protein OS=Oryza... 263 5e-69 tr|B7XFU6|B7XFU6_BOMMO Clathrin OS=Bombyx mori PE=2 SV=1 263 5e-69 tr|B7PUK8|B7PUK8_IXOSC Clathrin heavy chain, putative (Fragment)... 260 3e-68 tr|B0X5K8|B0X5K8_CULQU Clathrin heavy chain OS=Culex quinquefasc... 258 1e-67 tr|A7RVC0|A7RVC0_NEMVE Predicted protein OS=Nematostella vectens... 258 1e-67 tr|B6NYG4|B6NYG4_BRAFL Putative uncharacterized protein OS=Branc... 257 3e-67 tr|B6MS43|B6MS43_BRAFL Putative uncharacterized protein OS=Branc... 257 3e-67 tr|B4NEJ1|B4NEJ1_DROWI GK25278 OS=Drosophila willistoni GN=GK252... 256 5e-67 tr|Q7PQY9|Q7PQY9_ANOGA AGAP003021-PA OS=Anopheles gambiae GN=AGA... 256 6e-67
>tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167464 PE=4 SV=1 Length = 1709
Score = 340 bits (873), Expect = 2e-92 Identities = 172/188 (91%), Positives = 183/188 (97%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERMEPDLW KVL+PENP RRQLIDQVVSTALPESKNPEQVSATVKAFMTA Sbjct: 953 LFKLQARYVVERMEPDLWLKVLNPENPCRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 1012
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS NPNLQNLLILTAIKAD +RVMDY+NRLDNFDGPAVGEI Sbjct: 1013 DLPHELIELLEKIVLQNSAFSGNPNLQNLLILTAIKADTTRVMDYINRLDNFDGPAVGEI 1072
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AVG+ELYEEAFAIFKKFNLNVQAVNVLLDNIR+I+RA+EFA+RVEED+VWSQV KAQL+E Sbjct: 1073 AVGAELYEEAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAARVEEDDVWSQVGKAQLRE 1132
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1133 GLVSDAIE 1140
>tr|A9RFW2|A9RFW2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158810 PE=4 SV=1 Length = 1712
Score = 336 bits (861), Expect = 6e-91 Identities = 170/188 (90%), Positives = 182/188 (96%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERMEPDLW KVL+PEN RRQLIDQVVSTALPESKNPEQVSATVKAFMTA Sbjct: 953 LFKLQARYVVERMEPDLWLKVLNPENSCRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 1012
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS NPNLQNLLILTAIKAD +RVMDY+NRLDNFDGPAVGEI Sbjct: 1013 DLPHELIELLEKIVLQNSAFSGNPNLQNLLILTAIKADTTRVMDYINRLDNFDGPAVGEI 1072
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AVG+EL+EEAFAIFKKFNLNVQAVNVLLDNIR+I+RA+EFA+RVEED+VWSQV KAQL+E Sbjct: 1073 AVGAELFEEAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAARVEEDDVWSQVGKAQLRE 1132
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1133 GLVSDAIE 1140
>tr|A9U2Z4|A9U2Z4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227829 PE=4 SV=1 Length = 1715
Score = 335 bits (859), Expect = 1e-90 Identities = 167/188 (88%), Positives = 182/188 (96%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 +FK QARY+VERM+P+LW KVLDPENP+RRQLIDQVVSTALPESKNPEQVSATVKAFMTA Sbjct: 957 MFKPQARYVVERMDPELWLKVLDPENPFRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 1016
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS NPNLQNLLILTAIKAD+SRVMDY+NRLDNFDGPAVGEI Sbjct: 1017 DLPHELIELLEKIVLQNSAFSGNPNLQNLLILTAIKADKSRVMDYINRLDNFDGPAVGEI 1076
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AVG+ELYEEAFAIFKKFNLNVQAVNVLLD++R I+RA+EFA+RVEEDEVWSQV AQL+E Sbjct: 1077 AVGAELYEEAFAIFKKFNLNVQAVNVLLDHLRDIDRAVEFAARVEEDEVWSQVGMAQLRE 1136
Query: 25 GLVSDAIE 2 GLVSDAI+ Sbjct: 1137 GLVSDAIQ 1144
>tr|A7Q3K1|A7Q3K1_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029319001 PE=4 SV=1 Length = 1702
Score = 324 bits (830), Expect = 2e-87 Identities = 166/188 (88%), Positives = 178/188 (94%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVLDP+N YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 951 LFKLQARYVVERMDSDLWEKVLDPDNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 1010
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVGE+ Sbjct: 1011 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEV 1070
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++L+EEAFAIFKKFNLNVQAVNVLLDNI+SIERA+EFA RVEED VWSQVAKAQL+E Sbjct: 1071 AVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLRE 1130
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1131 GLVSDAIE 1138
>tr|A5ACP0|A5ACP0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005429 PE=4 SV=1 Length = 1704
Score = 324 bits (830), Expect = 2e-87 Identities = 166/188 (88%), Positives = 178/188 (94%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVLDP+N YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 953 LFKLQARYVVERMDSDLWEKVLDPDNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 1012
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVGE+ Sbjct: 1013 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEV 1072
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++L+EEAFAIFKKFNLNVQAVNVLLDNI+SIERA+EFA RVEED VWSQVAKAQL+E Sbjct: 1073 AVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLRE 1132
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1133 GLVSDAIE 1140
>tr|A7NYC7|A7NYC7_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024069001 PE=4 SV=1 Length = 1559
Score = 323 bits (828), Expect = 4e-87 Identities = 166/188 (88%), Positives = 177/188 (94%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVL P+N YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 807 LFKLQARYVVERMDADLWEKVLSPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 866
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVG++ Sbjct: 867 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGDV 926
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++LYEEAFAIFKKFNLNVQAVNVLLDNI+SIERA+EFA RVEED VWSQVAKAQLKE Sbjct: 927 AVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLKE 986
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 987 GLVSDAIE 994
>tr|Q9CA00|Q9CA00_ARATH Putative clathrin heavy chain, 3' partial; 6334-1 (Fragment) OS=Arabidopsis thaliana GN=F17O14.1 PE=4 SV=1 Length = 1280
Score = 322 bits (826), Expect = 7e-87 Identities = 166/188 (88%), Positives = 176/188 (93%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVLD N YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 953 LFKLQARYVVERMDGDLWDKVLDENNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 1012
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVGE+ Sbjct: 1013 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEV 1072
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++LYEEAFAIFKKFNLNVQAVNVLLDN+RSIERA+EFA RVEED VWSQVAKAQL+E Sbjct: 1073 AVEAQLYEEAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRE 1132
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1133 GLVSDAIE 1140
>tr|Q9C6U0|Q9C6U0_ARATH Clathrin heavy chain, putative OS=Arabidopsis thaliana GN=T8G24.1 PE=4 SV=1 Length = 1516
Score = 322 bits (826), Expect = 7e-87 Identities = 166/188 (88%), Positives = 176/188 (93%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVLD N YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 766 LFKLQARYVVERMDGDLWDKVLDENNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 825
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVGE+ Sbjct: 826 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEV 885
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++LYEEAFAIFKKFNLNVQAVNVLLDN+RSIERA+EFA RVEED VWSQVAKAQL+E Sbjct: 886 AVEAQLYEEAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRE 945
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 946 GLVSDAIE 953
>tr|Q0WLB5|Q0WLB5_ARATH Putative uncharacterized protein At3g08530 OS=Arabidopsis thaliana GN=At3g08530 PE=2 SV=1 Length = 1703
Score = 322 bits (826), Expect = 7e-87 Identities = 166/188 (88%), Positives = 176/188 (93%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVLD N YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 953 LFKLQARYVVERMDGDLWDKVLDENNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 1012
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVGE+ Sbjct: 1013 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEV 1072
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++LYEEAFAIFKKFNLNVQAVNVLLDN+RSIERA+EFA RVEED VWSQVAKAQL+E Sbjct: 1073 AVEAQLYEEAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRE 1132
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1133 GLVSDAIE 1140
>tr|Q9SRM1|Q9SRM1_ARATH Clathrin heavy chain, putative; 28833-19741 OS=Arabidopsis thaliana GN=F9F8.6 PE=4 SV=1 Length = 1705
Score = 322 bits (825), Expect = 9e-87 Identities = 166/188 (88%), Positives = 176/188 (93%) Frame = -1
Query: 565 LFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTALPESKNPEQVSATVKAFMTA 386 LFKLQARY+VERM+ DLW KVL EN YRRQLIDQVVSTALPESK+PEQVSA VKAFMTA Sbjct: 953 LFKLQARYVVERMDGDLWEKVLTEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTA 1012
Query: 385 DLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSRVMDYVNRLDNFDGPAVGEI 206 DLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SRVMDY+NRLDNFDGPAVGE+ Sbjct: 1013 DLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEV 1072
Query: 205 AVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFASRVEEDEVWSQVAKAQLKE 26 AV ++LYEEAFAIFKKFNLNVQAVNVLLDN+RSIERA+EFA RVEED VWSQVAKAQL+E Sbjct: 1073 AVDAQLYEEAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDAVWSQVAKAQLRE 1132
Query: 25 GLVSDAIE 2 GLVSDAIE Sbjct: 1133 GLVSDAIE 1140
|