NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912075
Clone id YMU001_000012_G06
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCCAACGAGTCTTCCTCAACATATGCCTGATTCTCCTTGAGAGCCAAGAAGAACGAACC
CATCCGCTCCTAACTAGACATTTGCCATAACCCACAATCGGGAGCAAGCAACCTCAAAAC
AGCTCTGAATACTCTCTTCCTCGTTCCACAGAACTGACATTCAGTGACATTACGGAGAAA
AACTCTGACCAACTCAGCTCGTCTCCAGCTGCTCTCAAAATATTTGACAAGGATACCACG
ACAAAGCAAAAAACCAAATGTGCGCCTAGACCAGACCCTTCCTCACCCTGCTCAAATACT
CCTTCATCCTTGAACTTAATCTGTCCCATCTCCACCCTGCTCATAACCGTTGGCGGTATC
CAATAGACAACCTCAAATCCCTGCCAATGCTCAGCACAAAGATCAGAACTCTTACAAACC
TTCATCCTCGAGACAACTCTACGAAAGTACAACAATGTAGACCACCCATGAGGTAGCCCA
CCTCCACTGTCAAA
■■Homology search results ■■ -
sp_hit_id Q9HDV3
Definition sp|Q9HDV3|YOE7_SCHPO UPF0663 protein P19A11.07c OS=Schizosaccharomyces pombe
Align length 37
Score (bit) 31.6
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912075|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_G06.
         (494 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9HDV3|YOE7_SCHPO UPF0663 protein P19A11.07c OS=Schizosacchar...    32   2.1  
sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyce...    31   2.7  
sp|Q17QW0|DJC22_BOVIN DnaJ homolog subfamily C member 22 OS=Bos ...    30   6.0  
sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyosteliu...    30   6.0  
sp|O43615|TIM44_HUMAN Mitochondrial import inner membrane transl...    30   7.9  

>sp|Q9HDV3|YOE7_SCHPO UPF0663 protein P19A11.07c
           OS=Schizosaccharomyces pombe GN=SPBP19A11.07c PE=2 SV=2
          Length = 676

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -1

Query: 257 LVFCFVVVSLSNILRAAGDELSWSEFFSVMSLNVSSV 147
           L+ CF+VV LSN L  + DEL +S   S++SL+   +
Sbjct: 203 LLSCFLVVLLSNTLYDSIDELDFSVLNSIVSLDAKDI 239


>sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyces
           lactis GN=ATG7 PE=3 SV=1
          Length = 603

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 240 DKAKNQMCA*TRPFLTLLKYSFILELNLSHLHPAHN 347
           D+  +QMC  TRP + LL  S  +EL +++L P+ N
Sbjct: 478 DRTLDQMCTVTRPGVALLAASQAVELLVTYLQPSTN 513


>sp|Q17QW0|DJC22_BOVIN DnaJ homolog subfamily C member 22 OS=Bos
           taurus GN=DNAJC22 PE=2 SV=2
          Length = 347

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 260 HLVFCFVVVSLSNILRAAGDELSWSEFFSVMSLNVSSV 147
           H V C   V+LS +    G  LSW  FF ++   + SV
Sbjct: 198 HSVLCHTAVTLSYVADTLGSFLSWFSFFPLLGRLLESV 235


>sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyostelium
           discoideum GN=atg7 PE=3 SV=1
          Length = 707

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 240 DKAKNQMCA*TRPFLTLLKYSFILELNLSHLH 335
           D+  +QMC  TRP L+++  S  +EL +S +H
Sbjct: 556 DRTLDQMCTVTRPGLSMMASSIAVELLISTIH 587


>sp|O43615|TIM44_HUMAN Mitochondrial import inner membrane
           translocase subunit TIM44 OS=Homo sapiens GN=TIMM44 PE=1
           SV=2
          Length = 452

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 365 YWIPPTVMSRVEMGQIKFKDEGVFEQGEEGSGLGAH 258
           Y  P  +  R E    KFK+E VFE  EE  G+  H
Sbjct: 201 YRRPQRLRKRTEFAGDKFKEEKVFEPNEEALGVVLH 236
tr_hit_id B4KPJ3
Definition tr|B4KPJ3|B4KPJ3_DROMO GI20946 OS=Drosophila mojavensis
Align length 45
Score (bit) 37.4
E-value 0.39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912075|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_G06.
         (494 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4KPJ3|B4KPJ3_DROMO GI20946 OS=Drosophila mojavensis GN=GI209...    37   0.39 
tr|B0J5M2|B0J5M2_RHILT Putative uncharacterized protein OS=Rhizo...    36   0.86 
tr|B4NRI9|B4NRI9_DROWI GK22296 OS=Drosophila willistoni GN=GK222...    35   1.9  
tr|B4NRI1|B4NRI1_DROWI GK21228 OS=Drosophila willistoni GN=GK212...    35   1.9  
tr|B4NR71|B4NR71_DROWI GK20285 OS=Drosophila willistoni GN=GK202...    35   1.9  
tr|B4NR50|B4NR50_DROWI GK19712 OS=Drosophila willistoni GN=GK197...    35   1.9  
tr|B4NR18|B4NR18_DROWI GK21018 OS=Drosophila willistoni GN=GK210...    35   1.9  
tr|B4NR08|B4NR08_DROWI GK23584 OS=Drosophila willistoni GN=GK235...    35   1.9  
tr|B4NQT1|B4NQT1_DROWI GK10411 OS=Drosophila willistoni GN=GK104...    35   1.9  
tr|B4S2L1|B4S2L1_ALTMD Signal transduction histidine kinase (Con...    34   3.3  
tr|B0G9E6|B0G9E6_9FIRM Putative uncharacterized protein OS=Dorea...    34   4.3  
tr|B4NRR4|B4NRR4_DROWI GK18773 OS=Drosophila willistoni GN=GK187...    33   5.6  
tr|B4NRH2|B4NRH2_DROWI GK18648 OS=Drosophila willistoni GN=GK186...    33   5.6  
tr|B4NRG2|B4NRG2_DROWI GK18790 OS=Drosophila willistoni GN=GK187...    33   5.6  
tr|B4NRB5|B4NRB5_DROWI GK21284 OS=Drosophila willistoni GN=GK212...    33   5.6  
tr|B4NQW6|B4NQW6_DROWI GK24080 OS=Drosophila willistoni GN=GK240...    33   5.6  
tr|B4MI10|B4MI10_DROWI GK18777 OS=Drosophila willistoni GN=GK187...    33   5.6  
tr|Q38EB7|Q38EB7_9TRYP Chloride channel protein, putative OS=Try...    33   7.3  
tr|B0D3W0|B0D3W0_LACBS Sec7-like domain is implicated in guanine...    33   7.3  

>tr|B4KPJ3|B4KPJ3_DROMO GI20946 OS=Drosophila mojavensis GN=GI20946
           PE=4 SV=1
          Length = 486

 Score = 37.4 bits (85), Expect = 0.39
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 207 WRRAELVRVFLRNVTECQFCG--TRKRVFRAVLRLLAPDCGLWQM 79
           W + E    FL  V EC  CG     R FR +++   PD G WQM
Sbjct: 103 WHKLERCNYFLNTVIECLACGEPVEGRTFRYLMKHTVPDGGNWQM 147


>tr|B0J5M2|B0J5M2_RHILT Putative uncharacterized protein
           OS=Rhizobium leguminosarum bv. trifolii WSM1325
           GN=RlegDRAFT_1808 PE=4 SV=1
          Length = 497

 Score = 36.2 bits (82), Expect = 0.86
 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
 Frame = -1

Query: 386 WQGFEVVYWIPPTVMSRVEMGQIKFKDEGV--------FEQGEEGSGLGAHLVFCFVVVS 231
           W+G  VV    PT ++ + + Q++++++GV         E GE  + +GA   F      
Sbjct: 146 WEGRVVV----PTTLNSISVDQMRWREQGVSPGVAGPASELGEAYASMGARKTFTCAPYQ 201

Query: 230 LSNILRAAGDELSWSEFFSVMSLNVSSVERGREYSELF*GCL 105
           LS+  R  G++++W+E  +V+  N     R  +Y +    C+
Sbjct: 202 LSSAPR-QGEQVAWAESNAVVFANSVLGARTAKYPDYLDLCI 242


>tr|B4NRI9|B4NRI9_DROWI GK22296 OS=Drosophila willistoni GN=GK22296
           PE=4 SV=1
          Length = 86

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 28  QQQIPEWARQDDQNSYNPYNTRQLYSS 54


>tr|B4NRI1|B4NRI1_DROWI GK21228 OS=Drosophila willistoni GN=GK21228
           PE=4 SV=1
          Length = 299

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 111 QQQIPEWARQDDQNSYNPYNTRQLYSS 137


>tr|B4NR71|B4NR71_DROWI GK20285 OS=Drosophila willistoni GN=GK20285
           PE=4 SV=1
          Length = 203

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 10  QQQIPEWARQDDQNSYNPYNTRQLYSS 36


>tr|B4NR50|B4NR50_DROWI GK19712 OS=Drosophila willistoni GN=GK19712
           PE=4 SV=1
          Length = 212

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 28  QQQIPEWARQDDQNSYNPYNTRQLYSS 54


>tr|B4NR18|B4NR18_DROWI GK21018 OS=Drosophila willistoni GN=GK21018
           PE=4 SV=1
          Length = 301

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 111 QQQIPEWARQDDQNSYNPYNTRQLYSS 137


>tr|B4NR08|B4NR08_DROWI GK23584 OS=Drosophila willistoni GN=GK23584
           PE=4 SV=1
          Length = 280

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 111 QQQIPEWARQDDQNSYNPYNTRQLYSS 137


>tr|B4NQT1|B4NQT1_DROWI GK10411 OS=Drosophila willistoni GN=GK10411
           PE=4 SV=1
          Length = 279

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 368 QPQIPANAQHKDQNSYKPSSSRQLYES 448
           Q QIP  A+  DQNSY P ++RQLY S
Sbjct: 111 QQQIPEWARQDDQNSYNPYNTRQLYSS 137


>tr|B4S2L1|B4S2L1_ALTMD Signal transduction histidine kinase
           (Contains HAMP domain) OS=Alteromonas macleodii (strain
           DSM 17117 / Deep ecotype) GN=MADE_00277 PE=4 SV=1
          Length = 560

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -1

Query: 359 IPPTVMSRVEMGQIKFKDEGVFEQGEEGSGLGAHLVFCFVVVSLSNILRAAGDELSWSEF 180
           IPP +  R+      F      ++G+ GSGLG HLV+  V  +L+  +   G+E    EF
Sbjct: 494 IPPEIRKRI------FDPFVTTKRGQGGSGLGMHLVYNLVTQALNGSISITGEEGDGVEF 547