BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912088|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_H10.
         (131 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q97B98|FEN_THEVO Flap structure-specific endonuclease OS=Ther...    30   3.7  
sp|Q89AZ6|FLIJ_BUCBP Flagellar fliJ protein OS=Buchnera aphidico...    30   4.9  

>sp|Q97B98|FEN_THEVO Flap structure-specific endonuclease
           OS=Thermoplasma volcanium GN=fen PE=3 SV=1
          Length = 335

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -3

Query: 129 DIVFKHNTGLHEAR---LAGHTPNLTFQCHSNVTIYDACPKISASG 1
           DIV  H T L +      A  T N+ +Q  SNV  YD  P + +SG
Sbjct: 7   DIVVSHQTSLKDQANQVFAIDTYNILYQLLSNVRQYDGTPLMDSSG 52


>sp|Q89AZ6|FLIJ_BUCBP Flagellar fliJ protein OS=Buchnera aphidicola
           subsp. Baizongia pistaciae GN=fliJ PE=3 SV=1
          Length = 155

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 70  KLDIPMSLQCHHLRCVPQNLCFW 2
           +LDI MS QC +L+C+ Q L F+
Sbjct: 39  QLDILMSYQCEYLKCLDQELKFY 61

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912088|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_H10.
         (131 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******