BP912089 |
Clone id |
YMU001_000012_H11 |
Library |
YMU01 |
Length |
578 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000012_H11. |
Accession |
BP912089 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1268Contig1 |
Sequence |
TTGTTTACACATATAAGGAGCATCCTGCCCCATGAAGACCATCTGCAATAGCCAATGACT TTACCAAGCCATTTGGAAGACAAATTGTTATGAGGCATTTAGCTTGCCTACCACAGATCA AAGCAACAACAATGTTTCTCATCTTTGATAAAGTTCCATTAACTCCAACAGCTGATGAGA TGCCTTCACCTGCTAATGAGAGAAGGAAAGAGGGGATGGTGTTTGATATAGCAAACACCA CGAACACGAAGCATGGCCAATGAAGGACTCAAAGGCAACATGTATTATTGAGCTTGCTCC ACCAGAAATCCCTGATTCGAATCTGTATAGAAAATCCTTTCATTCTCAACTAGCGTCTGA GGTTTAACCTACCCAAAAACTCTGACAAGCGAACATCCTTCGCTATAACAGTATTACCAT CTGCCGCACCAAGATGGCGTAACTTCACTTCCTCTGTTGTGCCATCTCTGAAGGCATGCT TATAGAAACAACTAGTGCCAAACTGGCACCTCCCATTGCCAAAGTCAAAGTGTTTACAAT CAATGTCTCTGACCCTAGCTTTGTATCCATCAATAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZA07 |
Definition |
sp|Q5ZA07|C3H41_ORYSJ Zinc finger CCCH domain-containing protein 41 OS=Oryza sativa subsp. japonica |
Align length |
67 |
Score (bit) |
106.0 |
E-value |
7.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T2C7 |
Definition |
tr|A9T2C7|A9T2C7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
65 |
Score (bit) |
114.0 |
E-value |
4.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912089|Adiantum capillus-veneris mRNA, clone: YMU001_000012_H11. (578 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T2C7|A9T2C7_PHYPA Predicted protein (Fragment) OS=Physcomit... 114 4e-24 tr|A9P800|A9P800_POPTR Putative uncharacterized protein OS=Popul... 111 3e-23 tr|A5B1G2|A5B1G2_VITVI Putative uncharacterized protein OS=Vitis... 110 7e-23 tr|B7F5N8|B7F5N8_ORYSJ cDNA clone:J013045F22, full insert sequen... 106 8e-22 tr|A3BB67|A3BB67_ORYSJ Putative uncharacterized protein OS=Oryza... 106 8e-22 tr|B8B148|B8B148_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|Q6IDS6|Q6IDS6_ARATH Putative uncharacterized protein At3g0850... 103 7e-21 tr|B7ZZ08|B7ZZ08_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-16 tr|A8J950|A8J950_CHLRE Predicted protein (Fragment) OS=Chlamydom... 79 1e-13 tr|A4RUZ1|A4RUZ1_OSTLU Predicted protein (Fragment) OS=Ostreococ... 71 4e-11 tr|Q01C50|Q01C50_OSTTA Putative makorin RING finger protein (ISS... 67 7e-10 tr|Q7X7W8|Q7X7W8_PEA Makorin ring-zinc-finger protein (Makorin R... 63 1e-08 tr|Q76KB3|Q76KB3_PEA Makorin ring-zinc-finger protein (Fragment)... 63 1e-08 tr|B4PIZ4|B4PIZ4_DROYA GE22057 OS=Drosophila yakuba GN=GE22057 P... 56 1e-06 tr|A7SZF4|A7SZF4_NEMVE Predicted protein OS=Nematostella vectens... 56 1e-06 tr|B6LHA9|B6LHA9_BRAFL Putative uncharacterized protein (Fragmen... 56 2e-06 tr|Q91457|Q91457_SERQU YGHL2 (Fragment) OS=Seriola quinqueradiat... 55 4e-06 tr|Q90WG5|Q90WG5_SERQU Zinc finger protein YGHLC3HC4 (Fragment) ... 54 5e-06 tr|Q90WG4|Q90WG4_SERQU Zinc finger protein (Fragment) OS=Seriola... 54 5e-06 tr|Q8UW54|Q8UW54_SERQU Makorin ring finger protein 2 (Fragment) ... 54 5e-06 tr|Q54A73|Q54A73_SERQU Ring finger protein MAKORIN2 (Makorin rin... 54 5e-06 tr|Q1RLH2|Q1RLH2_CIOIN Zinc finger protein OS=Ciona intestinalis... 54 6e-06 tr|A9UUB3|A9UUB3_MONBE Predicted protein (Fragment) OS=Monosiga ... 54 6e-06 tr|Q8C5V4|Q8C5V4_MOUSE Putative uncharacterized protein OS=Mus m... 54 8e-06 tr|Q1T784|Q1T784_MUSCR Makorin1 (Fragment) OS=Mus caroli GN=Mako... 54 8e-06 tr|Q172B6|Q172B6_AEDAE Makorin (Fragment) OS=Aedes aegypti GN=AA... 54 8e-06 tr|B6KZ74|B6KZ74_BRAFL Putative uncharacterized protein (Fragmen... 52 2e-05 tr|Q9PTI4|Q9PTI4_CHICK Makorin 1 OS=Gallus gallus GN=MKRN1 PE=2 ... 52 2e-05 tr|Q4R8U6|Q4R8U6_MACFA Testis cDNA clone: QtsA-11438, similar to... 52 2e-05 tr|B4DM96|B4DM96_HUMAN cDNA FLJ58200, highly similar to Makorin-... 52 2e-05
>tr|A9T2C7|A9T2C7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_139138 PE=4 SV=1 Length = 324
Score = 114 bits (285), Expect = 4e-24 Identities = 49/65 (75%), Positives = 59/65 (90%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 II+GYK ++ ++DC+HFD+GNG C FGTSCFYKHAF+DGT EEVKLRHLGAADGNTVI K Sbjct: 250 IINGYKNKLGEVDCRHFDYGNGTCPFGTSCFYKHAFKDGTLEEVKLRHLGAADGNTVIVK 309
Query: 397 DVRLS 383 +VRL+ Sbjct: 310 NVRLA 314
>tr|A9P800|A9P800_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 109
Score = 111 bits (278), Expect = 3e-23 Identities = 49/67 (73%), Positives = 56/67 (83%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 I+D YK ++R IDCKHFDFGNG C FGTSCFYKHA+RDG EEV LRHLGA DG VIAK Sbjct: 36 IVDTYKEKLRSIDCKHFDFGNGNCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGQGVIAK 95
Query: 397 DVRLSEF 377 ++RLS+F Sbjct: 96 NIRLSDF 102
>tr|A5B1G2|A5B1G2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028611 PE=4 SV=1 Length = 428
Score = 110 bits (274), Expect = 7e-23 Identities = 47/65 (72%), Positives = 56/65 (86%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 I+D YKA++R IDCKHFDFGNG C FGTSCFYKHA+RDG EEV LRHLGA DG+ +IAK Sbjct: 323 IVDSYKAKLRSIDCKHFDFGNGTCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGHVMIAK 382
Query: 397 DVRLS 383 ++R+S Sbjct: 383 NIRMS 387
>tr|B7F5N8|B7F5N8_ORYSJ cDNA clone:J013045F22, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 368
Score = 106 bits (265), Expect = 8e-22 Identities = 47/67 (70%), Positives = 57/67 (85%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 IID YKA+++ IDCK+FDFG G C FG+SCFYKHA+RDG EEV LRHL A DG+TVIAK Sbjct: 296 IIDNYKAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYRDGRLEEVILRHLDADDGSTVIAK 355
Query: 397 DVRLSEF 377 ++RLS+F Sbjct: 356 NIRLSDF 362
>tr|A3BB67|A3BB67_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020289 PE=4 SV=1 Length = 364
Score = 106 bits (265), Expect = 8e-22 Identities = 47/67 (70%), Positives = 57/67 (85%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 IID YKA+++ IDCK+FDFG G C FG+SCFYKHA+RDG EEV LRHL A DG+TVIAK Sbjct: 292 IIDNYKAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYRDGRLEEVILRHLDADDGSTVIAK 351
Query: 397 DVRLSEF 377 ++RLS+F Sbjct: 352 NIRLSDF 358
>tr|B8B148|B8B148_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22743 PE=4 SV=1 Length = 368
Score = 105 bits (262), Expect = 2e-21 Identities = 46/67 (68%), Positives = 57/67 (85%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 IID YKA+++ IDCK+FDFG G C FG+SCFYKHA++DG EEV LRHL A DG+TVIAK Sbjct: 296 IIDNYKAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYKDGRLEEVILRHLDADDGSTVIAK 355
Query: 397 DVRLSEF 377 ++RLS+F Sbjct: 356 NIRLSDF 362
>tr|Q6IDS6|Q6IDS6_ARATH Putative uncharacterized protein At3g08505 OS=Arabidopsis thaliana GN=At3g08505 PE=2 SV=1 Length = 323
Score = 103 bits (257), Expect = 7e-21 Identities = 46/67 (68%), Positives = 53/67 (79%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 IID YKA++R IDCKHF+FGNG C FG SCFYKHA+ DG EEV LRHLG+ +G TVI Sbjct: 250 IIDIYKAKLRSIDCKHFNFGNGNCPFGASCFYKHAYSDGHLEEVVLRHLGSQEGETVITD 309
Query: 397 DVRLSEF 377 +RLSEF Sbjct: 310 SIRLSEF 316
>tr|B7ZZ08|B7ZZ08_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 365
Score = 89.4 bits (220), Expect = 1e-16 Identities = 39/65 (60%), Positives = 48/65 (73%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 I++GYKA++R IDCKHFDFG G C FG+SCFYKHA+ DG E+ L H A D + IAK Sbjct: 293 IVEGYKAKLRSIDCKHFDFGKGTCPFGSSCFYKHAYDDGRLEDALLNHHDADDASAAIAK 352
Query: 397 DVRLS 383 +RLS Sbjct: 353 LMRLS 357
>tr|A8J950|A8J950_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_105687 PE=4 SV=1 Length = 328
Score = 79.3 bits (194), Expect = 1e-13 Identities = 35/67 (52%), Positives = 44/67 (65%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFRDGTTEEVKLRHLGAADGNTVIAK 398 I+ YKA++ IDC+HF FG+G C F TSCFY+HA+RDG E LR G ADG + Sbjct: 247 IVGAYKAKLGTIDCRHFAFGDGTCPFSTSCFYRHAYRDGRLEVPVLRRAGNADGEVRVVA 306
Query: 397 DVRLSEF 377 +RLS F Sbjct: 307 PLRLSAF 313
>tr|A4RUZ1|A4RUZ1_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_86816 PE=4 SV=1 Length = 159
Score = 71.2 bits (173), Expect = 4e-11 Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Frame = -2
Query: 577 IIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR-DGTTEEVKLRHLGAADGNTVIA 401 +ID Y+ R+ I CKHFD G+G C FGTSCFY+H +R G E ++R A+DG+ I Sbjct: 84 MIDSYRERMGKIPCKHFDGGDGTCPFGTSCFYEHRYRATGELESAEVRKSTASDGSLNIL 143
Query: 400 KDVRLSEF 377 VRLS+F Sbjct: 144 TPVRLSDF 151
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