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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912091
Clone id YMU001_000015_A04
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGGTTTCAAGTGATGGAAAATGACGAGAACAAGCGGCCAAGCATAAGAGAGACGGTTAGG
ACTCTTTTTAGAGAGGGAGGTTGGAGAGCATGCTATAAGGGGCTTGGTCCTCGCTGGGCC
ACAATGTCAATGTCTGCGACAACGATGATCACGACGTATGAGTTTCTGAAGCGCATGTCG
ACCAAGCAGGATATTAACAATGGTGGCTAAGCTTGTAAAGAGGGTTGCAGAGATTGGTAA
GCGAAGCAAGCTGAAGCGATTGACCCCTTTTTGATGAGGATCATCAATGTGTCCATGTGC
CAGTTCCTTGGGCTTGTAATGACCTCAATTGTACATTAGAACTACCCCATATAGTGTAGG
TGTTTCTGGAGGATGGTGGTGGGGCTGGTTTCCCTGAGGAGGACAACCTCTCTTGTATAC
AACCCTCTTGTAAATTTACACGCGCCTTGCCGTACAAAGGGTATGGCTGGTTTTTGCTTT
GT
■■Homology search results ■■ -
sp_hit_id Q6CQR3
Definition sp|Q6CQR3|TPC1_KLULA Mitochondrial thiamine pyrophosphate carrier 1 OS=Kluyveromyces lactis
Align length 34
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912091|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_A04.
         (482 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CQR3|TPC1_KLULA Mitochondrial thiamine pyrophosphate carrie...    32   1.2  
sp|Q8N5S1|S2541_HUMAN Solute carrier family 25 member 41 OS=Homo...    30   4.4  
sp|O60029|PET8_ASHGO Putative mitochondrial carrier protein PET8...    30   4.4  
sp|P38087|YMC2_YEAST Carrier protein YMC2, mitochondrial OS=Sacc...    30   7.5  
sp|P32331|YMC1_YEAST Carrier protein YMC1, mitochondrial OS=Sacc...    30   7.5  
sp|Q8VEM8|MPCP_MOUSE Phosphate carrier protein, mitochondrial OS...    30   7.5  
sp|P16036|MPCP_RAT Phosphate carrier protein, mitochondrial OS=R...    29   9.8  
sp|P48233|CMC1_YEAST Calcium-binding mitochondrial carrier SAL1 ...    29   9.8  

>sp|Q6CQR3|TPC1_KLULA Mitochondrial thiamine pyrophosphate carrier 1
           OS=Kluyveromyces lactis GN=TPC1 PE=3 SV=1
          Length = 317

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKG 102
           R+Q+    E+K   I  TVRT+ +E G RA +KG
Sbjct: 45  RYQLQPVQEDKYKGIASTVRTIMKEEGLRALWKG 78


>sp|Q8N5S1|S2541_HUMAN Solute carrier family 25 member 41 OS=Homo
           sapiens GN=SLC25A41 PE=2 SV=2
          Length = 370

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 13/58 (22%), Positives = 24/58 (41%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKR 174
           R Q  +  E   P++R  ++ +  + GW   Y+G+ P               YE +K+
Sbjct: 309 RMQAQDTVEGSNPTMRGVLQRILAQQGWLGLYRGMTPTLLKVLPAGGISYVVYEAMKK 366


>sp|O60029|PET8_ASHGO Putative mitochondrial carrier protein PET8
           OS=Ashbya gossypii GN=PET8 PE=3 SV=1
          Length = 271

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 31  KRPSIRETVRTLFREGGWRACYKGLGPR 114
           +R  +    RTLFRE G R  ++G+GPR
Sbjct: 222 RRVPMLHLARTLFREEGARVFFRGIGPR 249


>sp|P38087|YMC2_YEAST Carrier protein YMC2, mitochondrial
           OS=Saccharomyces cerevisiae GN=YMC2 PE=1 SV=1
          Length = 329

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 11/38 (28%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = +1

Query: 10  VMENDENKRPSIRETV----RTLFREGGWRACYKGLGP 111
           +++ND+ ++P  + ++    +T++ + G RA +KG GP
Sbjct: 266 IIQNDDLRKPKYKNSISYVAKTIYAKEGIRAFFKGFGP 303


>sp|P32331|YMC1_YEAST Carrier protein YMC1, mitochondrial
           OS=Saccharomyces cerevisiae GN=YMC1 PE=1 SV=2
          Length = 307

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +1

Query: 10  VMENDENKRP----SIRETVRTLFREGGWRACYKGLGP 111
           VM+ D  ++P    SI    +TL+  GG  A +KG GP
Sbjct: 246 VMQTDNLQKPKFGNSISSVAKTLYANGGIGAFFKGFGP 283


>sp|Q8VEM8|MPCP_MOUSE Phosphate carrier protein, mitochondrial
           OS=Mus musculus GN=Slc25a3 PE=1 SV=1
          Length = 357

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 40  SIRETVRTLFREGGWRACYKGLGPRW 117
           ++RE V  +++E G  A YKG+ P W
Sbjct: 194 TLREAVPKMYKEEGLNAFYKGVAPLW 219


>sp|P16036|MPCP_RAT Phosphate carrier protein, mitochondrial
           OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1
          Length = 356

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 40  SIRETVRTLFREGGWRACYKGLGPRW 117
           ++RE V  +++E G  A YKG+ P W
Sbjct: 193 TLREAVPKMYKEEGLNAFYKGVAPVW 218


>sp|P48233|CMC1_YEAST Calcium-binding mitochondrial carrier SAL1
           OS=Saccharomyces cerevisiae GN=SAL1 PE=1 SV=3
          Length = 545

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 22  DENKRPS-IRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKRMSTKQDIN 198
           D NK  S + + V++L+R+GG +A Y G G                +E  K++ TK    
Sbjct: 280 DINKISSPLAKAVKSLYRQGGIKAFYVGNGLNVIKVFPESSIKFGSFEVTKKIMTK---- 335

Query: 199 NGG*ACKEGCRD 234
                  EGCRD
Sbjct: 336 ------LEGCRD 341
tr_hit_id Q10R11
Definition tr|Q10R11|Q10R11_ORYSJ Mitochondrial carrier, putative, expressed OS=Oryza sativa subsp. japonica
Align length 67
Score (bit) 69.7
E-value 7.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912091|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_A04.
         (482 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q10R11|Q10R11_ORYSJ Mitochondrial carrier, putative, expresse...    70   7e-11
tr|A3AEN9|A3AEN9_ORYSJ Putative uncharacterized protein OS=Oryza...    70   7e-11
tr|Q0DUP1|Q0DUP1_ORYSJ Os03g0175200 protein OS=Oryza sativa subs...    69   9e-11
tr|A2XD40|A2XD40_ORYSI Putative uncharacterized protein OS=Oryza...    69   9e-11
tr|A9S2A5|A9S2A5_PHYPA Predicted protein OS=Physcomitrella paten...    69   2e-10
tr|A9S2A7|A9S2A7_PHYPA Predicted protein OS=Physcomitrella paten...    67   3e-10
tr|A9PJ11|A9PJ11_POPJC Putative uncharacterized protein OS=Popul...    65   2e-09
tr|Q67U56|Q67U56_ORYSJ Mitochondrial substrate carrier-like prot...    64   3e-09
tr|Q0J1F2|Q0J1F2_ORYSJ Os09g0444700 protein (Fragment) OS=Oryza ...    64   3e-09
tr|B8BCG8|B8BCG8_ORYSI Putative uncharacterized protein OS=Oryza...    64   3e-09
tr|A3BZB9|A3BZB9_ORYSJ Putative uncharacterized protein OS=Oryza...    64   3e-09
tr|A7P4R3|A7P4R3_VITVI Chromosome chr4 scaffold_6, whole genome ...    62   1e-08
tr|A5AXB2|A5AXB2_VITVI Putative uncharacterized protein OS=Vitis...    62   1e-08
tr|Q9SSP4|Q9SSP4_ARATH F3N23.2 protein (At1g72820/F3N23_2) OS=Ar...    62   1e-08
tr|Q0WN24|Q0WN24_ARATH Putative uncharacterized protein At1g7282...    62   1e-08
tr|A9SSH8|A9SSH8_PHYPA Predicted protein OS=Physcomitrella paten...    61   3e-08
tr|Q8RU49|Q8RU49_ORYSJ Os10g0397800 protein OS=Oryza sativa subs...    59   9e-08
tr|B8BGP2|B8BGP2_ORYSI Putative uncharacterized protein OS=Oryza...    59   9e-08
tr|Q93YZ9|Q93YZ9_ARATH AT5g26200/T19G15_50 OS=Arabidopsis thalia...    59   1e-07
tr|Q8L9F8|Q8L9F8_ARATH Mitochondrial carrier-like protein OS=Ara...    59   1e-07
tr|O81487|O81487_ARATH F9D12.12 protein OS=Arabidopsis thaliana ...    59   1e-07
tr|B4FZF1|B4FZF1_MAIZE Putative uncharacterized protein OS=Zea m...    58   2e-07
tr|A3C4H4|A3C4H4_ORYSJ Putative uncharacterized protein OS=Oryza...    58   2e-07
tr|B6STR5|B6STR5_MAIZE Mitochondrial carrier-like protein OS=Zea...    57   5e-07
tr|Q5ZDR4|Q5ZDR4_ORYSJ Putative mitochondrial carrier protein (P...    56   8e-07
tr|A2WPC9|A2WPC9_ORYSI Putative uncharacterized protein OS=Oryza...    56   8e-07
tr|B6TN92|B6TN92_MAIZE Putative uncharacterized protein OS=Zea m...    55   1e-06
tr|B4FH49|B4FH49_MAIZE Putative uncharacterized protein OS=Zea m...    55   1e-06
tr|Q9LFW2|Q9LFW2_ARATH Putative mitochondrial carrier protein OS...    53   9e-06
tr|Q949U9|Q949U9_ARATH Putative mitochondrial carrier protein OS...    53   9e-06

>tr|Q10R11|Q10R11_ORYSJ Mitochondrial carrier, putative, expressed
           OS=Oryza sativa subsp. japonica GN=LOC_Os03g07890 PE=3
           SV=1
          Length = 435

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +1

Query: 1   RFQVMEND--ENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKR 174
           R QVME D     RP+++ TVR L +EGGW ACY+GLGPRW             YEFLKR
Sbjct: 262 RIQVMETDGAAAARPTLKSTVRGLLKEGGWAACYRGLGPRWGSMSLSAATMVTTYEFLKR 321

Query: 175 MSTKQDI 195
           +S K+ +
Sbjct: 322 LSAKEGL 328


>tr|A3AEN9|A3AEN9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_009261 PE=3 SV=1
          Length = 345

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +1

Query: 1   RFQVMEND--ENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKR 174
           R QVME D     RP+++ TVR L +EGGW ACY+GLGPRW             YEFLKR
Sbjct: 172 RIQVMETDGAAAARPTLKSTVRGLLKEGGWAACYRGLGPRWGSMSLSAATMVTTYEFLKR 231

Query: 175 MSTKQDI 195
           +S K+ +
Sbjct: 232 LSAKEGL 238


>tr|Q0DUP1|Q0DUP1_ORYSJ Os03g0175200 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0175200 PE=3 SV=1
          Length = 323

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   RFQVMEND--ENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKR 174
           R QVME D     RP+++ TVR L +EGGW ACY+GLGPRW             YEFLKR
Sbjct: 255 RIQVMETDGAAAARPTLKSTVRGLLKEGGWAACYRGLGPRWGSMSLSAATMVTTYEFLKR 314

Query: 175 MSTKQ 189
           +S K+
Sbjct: 315 LSAKE 319


>tr|A2XD40|A2XD40_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10224 PE=3 SV=1
          Length = 330

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   RFQVMEND--ENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKR 174
           R QVME D     RP+++ TVR L +EGGW ACY+GLGPRW             YEFLKR
Sbjct: 262 RIQVMETDGAAAARPTLKSTVRGLLKEGGWAACYRGLGPRWGSMSLSAATMVTTYEFLKR 321

Query: 175 MSTKQ 189
           +S K+
Sbjct: 322 LSAKE 326


>tr|A9S2A5|A9S2A5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_180532 PE=3 SV=1
          Length = 328

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKRMS 180
           R QV++ +  +RPS+R T++TL  EGGW+A Y+G+GPRW             YEFLKRMS
Sbjct: 264 RLQVLKGECGRRPSVRWTLKTLIAEGGWKAFYRGIGPRWCSMSISATTMIVTYEFLKRMS 323

Query: 181 TKQD 192
            K +
Sbjct: 324 AKAE 327


>tr|A9S2A7|A9S2A7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_162432 PE=3 SV=1
          Length = 328

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 28/62 (45%), Positives = 40/62 (64%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKRMS 180
           R QV+EN+  KR ++ +T++TL ++GGW+A Y+G GPRW             YEFLKR+S
Sbjct: 264 RIQVLENEAGKRATVGQTLKTLVKDGGWKALYRGFGPRWASMSMSATTMITTYEFLKRLS 323

Query: 181 TK 186
            K
Sbjct: 324 AK 325


>tr|A9PJ11|A9PJ11_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 356

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1   RFQVMENDENKRP---SIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLK 171
           R QV++ +EN R    ++ +TVR L +EGG+ ACY+GLGPRW             YEFLK
Sbjct: 285 RLQVLDREENGRTRPLTVMQTVRNLVKEGGFAACYRGLGPRWVSMSMSATTMITTYEFLK 344

Query: 172 RMSTK 186
           R+STK
Sbjct: 345 RLSTK 349


>tr|Q67U56|Q67U56_ORYSJ Mitochondrial substrate carrier-like protein
           OS=Oryza sativa subsp. japonica GN=OJ1123_B08.12 PE=3
           SV=1
          Length = 245

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 29/62 (46%), Positives = 37/62 (59%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKRMS 180
           R QVM+ +  +  ++  TVR L +EGGW ACY+GLGPRW             YEFLKR+S
Sbjct: 177 RMQVMDGEGGEPITVGRTVRRLIKEGGWGACYRGLGPRWASMSLSATTMITTYEFLKRLS 236

Query: 181 TK 186
            K
Sbjct: 237 AK 238


>tr|Q0J1F2|Q0J1F2_ORYSJ Os09g0444700 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os09g0444700 PE=3 SV=1
          Length = 377

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 29/62 (46%), Positives = 37/62 (59%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKRMS 180
           R QVM+ +  +  ++  TVR L +EGGW ACY+GLGPRW             YEFLKR+S
Sbjct: 309 RMQVMDGEGGEPITVGRTVRRLIKEGGWGACYRGLGPRWASMSLSATTMITTYEFLKRLS 368

Query: 181 TK 186
            K
Sbjct: 369 AK 370


>tr|B8BCG8|B8BCG8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31556 PE=4 SV=1
          Length = 245

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 29/62 (46%), Positives = 37/62 (59%)
 Frame = +1

Query: 1   RFQVMENDENKRPSIRETVRTLFREGGWRACYKGLGPRWXXXXXXXXXXXXXYEFLKRMS 180
           R QVM+ +  +  ++  TVR L +EGGW ACY+GLGPRW             YEFLKR+S
Sbjct: 177 RMQVMDGEGGEPITVGRTVRRLIKEGGWGACYRGLGPRWASMSLSATTMITTYEFLKRLS 236

Query: 181 TK 186
            K
Sbjct: 237 AK 238