BP912092 |
Clone id |
YMU001_000015_A06 |
Library |
YMU01 |
Length |
564 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_A06. |
Accession |
BP912092 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1067Contig1 |
Sequence |
GGTTTAATCATACACAGGTTTACGTTTGGACCACATTTAGCCCCTATACCTAATACATTG ACCATGCTTATGGTATTTGCCGATAACTTTACATGTAACCCTCGTTTTTTTTGGGACCCA AATCTAGCTCTATTTACATCGTAGAGTCCAATTTACCAGAGTAATCAACTGCTTTGTAAG ACTATATAAAAAATATTACAAAAGCATCAAGATTCAAACATAGTTTCGGCAATCCAACTC CAATCCTTCATGGTTACAGCTGCGTATCCGGCTTTCTACTTCTTCCGGCTACGCTCAACA AGCATTTTTATATTTCAGCTTAGGCTGCTAACTCTGCAGTTAATTGGAGTGTCACTCATG GGACCACGCTCTAAAACAGCAGCCGCTCCCATGCCGGAACCAATGCACATTGATATGACT CCATACTTGCAAGCATTGCCTCGTCGTTGCATCTCATGAAGTAAGGTAGCAGCACACCTT GCACCAGTCGATCCAAGAGGATGCCCAAGAGCCATGGCTCCACCATTCACATTGACTTTG TCGAAGTTCAGCCCAAGCTCCTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q570C8 |
Definition |
sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana |
Align length |
80 |
Score (bit) |
117.0 |
E-value |
3.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912092|Adiantum capillus-veneris mRNA, clone: YMU001_000015_A06. (564 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=... 117 3e-26 sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=... 114 3e-25 sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=... 113 7e-25 sp|Q9ZHI1|THIL_CHRVO Acetyl-CoA acetyltransferase OS=Chromobacte... 87 7e-17 sp|O32177|FADA_BACSU 3-ketoacyl-CoA thiolase OS=Bacillus subtili... 85 2e-16 sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Ra... 84 5e-16 sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=... 84 5e-16 sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Ra... 84 5e-16 sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=... 84 5e-16 sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Hom... 80 5e-15 sp|Q8CAY6|THIC_MOUSE Acetyl-CoA acetyltransferase, cytosolic OS=... 80 9e-15 sp|Q9BWD1|THIC_HUMAN Acetyl-CoA acetyltransferase, cytosolic OS=... 78 3e-14 sp|P14611|THIL_RALEH Acetyl-CoA acetyltransferase OS=Ralstonia e... 77 4e-14 sp|Q5XI22|THIC_RAT Acetyl-CoA acetyltransferase, cytosolic OS=Ra... 77 4e-14 sp|P76461|ATOB_ECOLI Acetyl-CoA acetyltransferase OS=Escherichia... 77 8e-14 sp|P45363|THIL_THIVI Acetyl-CoA acetyltransferase OS=Thiocystis ... 76 1e-13 sp|P45359|THLA_CLOAB Acetyl-CoA acetyltransferase OS=Clostridium... 75 2e-13 sp|P45369|THIL_CHRVI Acetyl-CoA acetyltransferase OS=Chromatium ... 75 3e-13 sp|P27796|THIK_YEAST 3-ketoacyl-CoA thiolase, peroxisomal OS=Sac... 75 3e-13 sp|Q18AR0|THLA_CLOD6 Acetyl-CoA acetyltransferase OS=Clostridium... 74 4e-13 sp|Q5RES5|THIM_PONAB 3-ketoacyl-CoA thiolase, mitochondrial OS=P... 74 4e-13 sp|P42765|THIM_HUMAN 3-ketoacyl-CoA thiolase, mitochondrial OS=H... 74 4e-13 sp|A1TZR8|FADA_MARAV 3-ketoacyl-CoA thiolase OS=Marinobacter aqu... 74 5e-13 sp|Q3T0R7|THIM_BOVIN 3-ketoacyl-CoA thiolase, mitochondrial OS=B... 73 8e-13 sp|Q5E8X7|FADA_VIBF1 3-ketoacyl-CoA thiolase OS=Vibrio fischeri ... 73 8e-13 sp|Q9I2A8|ATOB_PSEAE Acetyl-CoA acetyltransferase OS=Pseudomonas... 73 1e-12 sp|P50174|THIL_RHIME Acetyl-CoA acetyltransferase OS=Rhizobium m... 72 2e-12 sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yar... 72 2e-12 sp|P07097|THIL_ZOORA Acetyl-CoA acetyltransferase OS=Zoogloea ra... 72 2e-12 sp|Q66FR9|FADA_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 72 2e-12
>sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2 Length = 457
Score = 117 bits (294), Expect = 3e-26 Identities = 55/80 (68%), Positives = 67/80 (83%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 K+L L+ +KVNVNGGA+A+GHPLG+TGARC ATLLHEM+RRG C++GVISMCIG+GMGA Sbjct: 374 KKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGA 433
Query: 383 AAVLERGPMSDTPINCRVSS 324 AAV ERG D N RV++ Sbjct: 434 AAVFERGDSVDNLSNARVAN 453
>sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2 Length = 462
Score = 114 bits (285), Expect = 3e-25 Identities = 53/76 (69%), Positives = 64/76 (84%) Frame = -2
Query: 560 ELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGAA 381 +LGL+ +K+NVNGGAMA+GHPLG+TGARC ATLLHEM+RRG C++GV+SMCIG+GMGAA Sbjct: 374 KLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAA 433
Query: 380 AVLERGPMSDTPINCR 333 AV ERG D N R Sbjct: 434 AVFERGDGVDELRNAR 449
>sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2 Length = 443
Score = 113 bits (282), Expect = 7e-25 Identities = 50/66 (75%), Positives = 61/66 (92%) Frame = -2
Query: 560 ELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGAA 381 +LGL+ +K+NVNGGA+A+GHPLG+TGARC ATLLHEM+RRG C++GV+SMCIGSGMGAA Sbjct: 366 KLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAA 425
Query: 380 AVLERG 363 AV ERG Sbjct: 426 AVFERG 431
>sp|Q9ZHI1|THIL_CHRVO Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2 Length = 392
Score = 86.7 bits (213), Expect = 7e-17 Identities = 42/66 (63%), Positives = 50/66 (75%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 KELG DKVNVNGGA+ALGHP+G++G R TLLHEMQRRG K G+ ++CIG GMG Sbjct: 328 KELGWGSDKVNVNGGAIALGHPIGASGCRVLVTLLHEMQRRG--AKKGLATLCIGGGMGV 385
Query: 383 AAVLER 366 A +ER Sbjct: 386 ALAVER 391
>sp|O32177|FADA_BACSU 3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1 Length = 391
Score = 85.1 bits (209), Expect = 2e-16 Identities = 39/65 (60%), Positives = 52/65 (80%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 +ELG++ +KVNVNGGA+ALGHPLG TG + +L+HEM+RR ++GV++MCIG GMGA Sbjct: 327 RELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRRNE--QFGVVTMCIGGGMGA 384
Query: 383 AAVLE 369 A V E Sbjct: 385 AGVFE 389
>sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2 Length = 424
Score = 84.0 bits (206), Expect = 5e-16 Identities = 42/65 (64%), Positives = 52/65 (80%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 ++LG+ +KVN GGA+ALGHPLG TGAR TLL+E++RRG YGV+SMCIG+GMGA Sbjct: 357 EKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGA 415
Query: 383 AAVLE 369 AAV E Sbjct: 416 AAVFE 420
>sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1 Length = 424
Score = 84.0 bits (206), Expect = 5e-16 Identities = 42/65 (64%), Positives = 52/65 (80%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 ++LG+ +KVN GGA+ALGHPLG TGAR TLL+E++RRG YGV+SMCIG+GMGA Sbjct: 357 EKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGA 415
Query: 383 AAVLE 369 AAV E Sbjct: 416 AAVFE 420
>sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2 Length = 424
Score = 84.0 bits (206), Expect = 5e-16 Identities = 42/65 (64%), Positives = 52/65 (80%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 ++LG+ +KVN GGA+ALGHPLG TGAR TLL+E++RRG YGV+SMCIG+GMGA Sbjct: 357 EKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGA 415
Query: 383 AAVLE 369 AAV E Sbjct: 416 AAVFE 420
>sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1 Length = 424
Score = 84.0 bits (206), Expect = 5e-16 Identities = 42/65 (64%), Positives = 52/65 (80%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 ++LG+ +KVN GGA+ALGHPLG TGAR TLL+E++RRG YGV+SMCIG+GMGA Sbjct: 357 EKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGA 415
Query: 383 AAVLE 369 AAV E Sbjct: 416 AAVFE 420
>sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 Length = 424
Score = 80.5 bits (197), Expect = 5e-15 Identities = 42/65 (64%), Positives = 51/65 (78%) Frame = -2
Query: 563 KELGLNFDKVNVNGGAMALGHPLGSTGARCAATLLHEMQRRGNACKYGVISMCIGSGMGA 384 ++L L +KVN GGA+ALGHPLG TGAR TLL+E++RRG YGV+SMCIG+GMGA Sbjct: 357 EKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVSMCIGTGMGA 415
Query: 383 AAVLE 369 AAV E Sbjct: 416 AAVFE 420
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0WLJ0 |
Definition |
tr|Q0WLJ0|Q0WLJ0_ARATH Peroxisomal-3-keto-acyl-CoA thiolase 1 OS=Arabidopsis thaliana |
Align length |
80 |
Score (bit) |
117.0 |
E-value |
3.0e-25 |
Report |
|