BP912093 |
Clone id |
YMU001_000015_A07 |
Library |
YMU01 |
Length |
477 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_A07. |
Accession |
BP912093 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1484Contig1 |
Sequence |
TTTTATTGGTTTTTTTATGTGCAAAAAGCCGAAATCTTACTCCAAATCATACATGATTAA ACCAGATAAGCATGAAGGCCTTTGGAAGGCAAGTTGAGAGGATTTTAAGAAACAGCCCTA AACAATGATTTAATGCAAAATCTAAGCCAAGAACATACATCTCTGGAAAAAGATAGTCAT AATAGTTCTCGATTCTTCTCAATCGGACTCTGCACACGACGCGTTTGCAGAATCGGCAAT CCTCACAAAAGGATCATGATAGAAATGCTCTTCTATAGAGGGGCCTAGGCTGCTCTCCCT CCTCCGTCACTGGAAGACTCAAACTCTTGCCTTTCCAGGCTGAAGGGCCTGAATTCGCTG CTGAAGCTTGATTACCTCATCTTTCTTGGTATTTTGCTGCTCTTCCATACCTTTCAGAAC GCTGTCCAAACGCCTTAACTCTCCAGTGATGTAATCAATGCGCTTGTTGACATTTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q17Q89 |
Definition |
sp|Q17Q89|PFD6_BOVIN Prefoldin subunit 6 OS=Bos taurus |
Align length |
50 |
Score (bit) |
47.8 |
E-value |
3.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912093|Adiantum capillus-veneris mRNA, clone: YMU001_000015_A07. (477 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q17Q89|PFD6_BOVIN Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 ... 48 3e-05 sp|Q03958|PFD6_MOUSE Prefoldin subunit 6 OS=Mus musculus GN=Pfdn... 47 4e-05 sp|O15212|PFD6_HUMAN Prefoldin subunit 6 OS=Homo sapiens GN=PFDN... 47 4e-05 sp|Q5TJE6|PFD6_CANFA Prefoldin subunit 6 OS=Canis familiaris GN=... 47 4e-05 sp|P0A4Q6|CNPD_LISMO 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 39 0.009 sp|Q71ZS1|CNPD_LISMF 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 39 0.009 sp|P0A4Q7|CNPD_LISIN 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 39 0.009 sp|A0AIK1|CNPD_LISW6 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 37 0.046 sp|Q9VW56|PFD6_DROME Probable prefoldin subunit 6 OS=Drosophila ... 35 0.13 sp|P52553|PFD6_YEAST Prefoldin subunit 6 OS=Saccharomyces cerevi... 34 0.39 sp|Q65JF1|CNPD_BACLD 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 33 0.51 sp|Q12532|YP009_YEAST Uncharacterized protein YPL009C OS=Sacchar... 32 1.5 sp|A3KN27|K2C74_BOVIN Keratin, type II cytoskeletal 74 OS=Bos ta... 32 1.5 sp|P02538|K2C6A_HUMAN Keratin, type II cytoskeletal 6A OS=Homo s... 32 1.5 sp|O31774|CNPD_BACSU 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 1.9 sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus musc... 31 2.5 sp|A7Z4W7|CNPD_BACA2 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 3.3 sp|O00939|TERT_EUPAE Telomerase reverse transcriptase OS=Euplote... 30 7.2 sp|O31954|YOND_BACSU SPBc2 prophage-derived uncharacterized prot... 30 7.4 sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein ub... 30 7.4 sp|P58302|RAD50_THEVO DNA double-strand break repair rad50 ATPas... 30 7.4 sp|P04264|K2C1_HUMAN Keratin, type II cytoskeletal 1 OS=Homo sap... 30 7.4 sp|Q66GS9|CP135_HUMAN Centrosomal protein of 135 kDa OS=Homo sap... 30 7.4 sp|Q732U7|CNPD_BACC1 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 30 7.4 sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanog... 29 9.6 sp|O97961|KTN1_VULVU Kinectin OS=Vulpes vulpes GN=KTN1 PE=2 SV=1 29 9.6 sp|Q96L93|KI16B_HUMAN Kinesin-like protein KIF16B OS=Homo sapien... 29 9.6 sp|Q6EIY9|K2C1_CANFA Keratin, type II cytoskeletal 1 OS=Canis fa... 29 9.6 sp|Q8BIL5|HOOK1_MOUSE Protein Hook homolog 1 OS=Mus musculus GN=... 29 9.6 sp|Q9UJC3|HOOK1_HUMAN Protein Hook homolog 1 OS=Homo sapiens GN=... 29 9.6
>sp|Q17Q89|PFD6_BOVIN Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1 Length = 129
Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/50 (42%), Positives = 33/50 (66%) Frame = -1
Query: 477 ANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQPGKA 328 A V KR+DYIT E++R +S L+ +E+Q +++ + +LQQ Q Q KA Sbjct: 74 ATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKA 123
>sp|Q03958|PFD6_MOUSE Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=2 SV=1 Length = 127
Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/50 (42%), Positives = 32/50 (64%) Frame = -1
Query: 477 ANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQPGKA 328 A V KR+DYIT E++R +S L+ +E Q +++ + +LQQ Q Q KA Sbjct: 74 ATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123
>sp|O15212|PFD6_HUMAN Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1 Length = 129
Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/50 (42%), Positives = 32/50 (64%) Frame = -1
Query: 477 ANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQPGKA 328 A V KR+DYIT E++R +S L+ +E Q +++ + +LQQ Q Q KA Sbjct: 74 ATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123
>sp|Q5TJE6|PFD6_CANFA Prefoldin subunit 6 OS=Canis familiaris GN=PFDN6 PE=3 SV=1 Length = 129
Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/50 (42%), Positives = 32/50 (64%) Frame = -1
Query: 477 ANVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQPGKA 328 A V KR+DYIT E++R +S L+ +E Q +++ + +LQQ Q Q KA Sbjct: 74 ATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123
>sp|P0A4Q6|CNPD_LISMO 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Listeria monocytogenes GN=lmo1399 PE=3 SV=1 Length = 520
Score = 39.3 bits (90), Expect = 0.009 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Frame = -1
Query: 465 KRIDYITGELRRLDSVLKGMEEQQNTKKDEV----IKLQQRIQALQPGKARV*VFQ*RRR 298 + +D L + ++ L+ EE + ++ ++ KL + IQA Q R+ Sbjct: 96 ENLDRKDTSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEA 155
Query: 297 ESSLGPSIEEHFYHDPFVRIADSANASCAESD*EESRTIMTIFFQRC 157 +S + +EE HD + + +S N + ESD ++++ I+++ QRC Sbjct: 156 KSIILNQVEEELTHDTAIMVKESENRAKEESD-KKAKNILSLAIQRC 201
>sp|Q71ZS1|CNPD_LISMF 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_1418 PE=3 SV=1 Length = 520
Score = 39.3 bits (90), Expect = 0.009 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Frame = -1
Query: 465 KRIDYITGELRRLDSVLKGMEEQQNTKKDEV----IKLQQRIQALQPGKARV*VFQ*RRR 298 + +D L + ++ L+ EE + ++ ++ KL + IQA Q R+ Sbjct: 96 ENLDRKDTSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEA 155
Query: 297 ESSLGPSIEEHFYHDPFVRIADSANASCAESD*EESRTIMTIFFQRC 157 +S + +EE HD + + +S N + ESD ++++ I+++ QRC Sbjct: 156 KSIILNQVEEELTHDTAIMVKESENRAKEESD-KKAKNILSLAIQRC 201
>sp|P0A4Q7|CNPD_LISIN 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Listeria innocua GN=lin1436 PE=3 SV=1 Length = 520
Score = 39.3 bits (90), Expect = 0.009 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Frame = -1
Query: 465 KRIDYITGELRRLDSVLKGMEEQQNTKKDEV----IKLQQRIQALQPGKARV*VFQ*RRR 298 + +D L + ++ L+ EE + ++ ++ KL + IQA Q R+ Sbjct: 96 ENLDRKDTSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEA 155
Query: 297 ESSLGPSIEEHFYHDPFVRIADSANASCAESD*EESRTIMTIFFQRC 157 +S + +EE HD + + +S N + ESD ++++ I+++ QRC Sbjct: 156 KSIILNQVEEELTHDTAIMVKESENRAKEESD-KKAKNILSLAIQRC 201
>sp|A0AIK1|CNPD_LISW6 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=lwe1415 PE=3 SV=1 Length = 520
Score = 37.0 bits (84), Expect = 0.046 Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Frame = -1
Query: 465 KRIDYITGELRRLDSVLKGMEEQQNTKKDEV----IKLQQRIQALQPGKARV*VFQ*RRR 298 + +D L + ++ L+ EE + ++ ++ KL + IQA Q R+ Sbjct: 96 ENLDRKDTSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEA 155
Query: 297 ESSLGPSIEEHFYHDPFVRIADSANASCAESD*EESRTIMTIFFQRC 157 +S + +E+ HD + + ++ N + ESD ++++ I+++ QRC Sbjct: 156 KSIILNQVEDELTHDTAIMVKETENRAKEESD-KKAKNILSLAIQRC 201
>sp|Q9VW56|PFD6_DROME Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=1 SV=1 Length = 125
Score = 35.4 bits (80), Expect = 0.13 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -1
Query: 474 NVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQ 349 NV KRI+YI+ EL+ L+ ME+ ++ V K QQ+ Q Sbjct: 78 NVGKRIEYISKELKSSTDALENMEKDMLKHRESVAKYQQQCQ 119
>sp|P52553|PFD6_YEAST Prefoldin subunit 6 OS=Saccharomyces cerevisiae GN=YKE2 PE=1 SV=1 Length = 114
Score = 33.9 bits (76), Expect = 0.39 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = -1
Query: 474 NVNKRIDYITGELRRLDSVLKGMEEQQNTKKDEVIKLQQRIQALQPGK 331 NV+KR+++I E+ R + ++ +E+ + E+IKL + PG+ Sbjct: 67 NVDKRLEFIETEITRCEKNIRDKQEELEKMRSELIKLNNTAASTGPGR 114
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NPK3 |
Definition |
tr|A9NPK3|A9NPK3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
51 |
Score (bit) |
77.8 |
E-value |
2.0e-13 |
Report |
|