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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912103
Clone id YMU001_000015_B09
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTTAGGAAAGGGAAGTGCTCACCTACCGCCATGCTTCCCTCTTCCATGCTTCCCTCTCC
CTTTCTCTCGTTGTACGCACCTCCACATACATATCCACCCATTTGCCCATGATGGGAGCG
TTGAGTAGACAATGGTTGTTGACTATGGCTTGAAATTCCCTATCCAAAATCAAGAGAGAA
CCTTTCCCACTTGGAATGTTTGCGTGTGTATTTGGATCCTCTTCCTCCATCTTTAAACGA
GGCAATGATGGGTCTATTGTGAAAAGATATTGAGAGACATACACAAAAGCCTCTTGTACA
ATCCAACCCTCTGCCATGCTTGCCTGAACACATGAAACCATTAGTGATTAAAGTAATCAA
TAAAAAACGTTGTGAATACAATCCAATCCTAATAATGTTTAAGGCTTAATATCGATGAAT
ACCTCTGGTTGTGATCGTAGCCTTACAAATTCTTTCAAGGTCTTTAGGAACCTCTCAAGA
AAGAACATCCACCTGGAGTGAACCACACCACAAATGGCTATCTCCTCAACAA
■■Homology search results ■■ -
sp_hit_id Q8R4K8
Definition sp|Q8R4K8|PAPP1_MOUSE Pappalysin-1 OS=Mus musculus
Align length 35
Score (bit) 30.4
E-value 5.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912103|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_B09.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8R4K8|PAPP1_MOUSE Pappalysin-1 OS=Mus musculus GN=Pappa PE=2...    30   5.6  
sp|Q28949|MA2B2_PIG Epididymis-specific alpha-mannosidase OS=Sus...    30   5.6  
sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1...    30   7.3  
sp|Q7TN83|SYT16_MOUSE Synaptotagmin-16 OS=Mus musculus GN=Syt16 ...    30   9.5  

>sp|Q8R4K8|PAPP1_MOUSE Pappalysin-1 OS=Mus musculus GN=Pappa PE=2
           SV=2
          Length = 1624

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +2

Query: 83  PHTYPPICP*WER*VDNGC*LWLEIPYPKSRENLS 187
           PHT PP CP        GC L LE  YP   E+L+
Sbjct: 765 PHTVPPACP-----EPQGCYLELEFRYPLVPESLT 794


>sp|Q28949|MA2B2_PIG Epididymis-specific alpha-mannosidase OS=Sus
           scrofa GN=MAN2B2 PE=1 SV=2
          Length = 995

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 427 GCDRSLTNSFKVFRNLSRKNIHLE*TTPQMAIS 525
           GCDR   N+ + F N+ R   H+   TP++ IS
Sbjct: 278 GCDRQFFNASQQFANMDRLMDHINKHTPELGIS 310


>sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1
           SV=3
          Length = 1627

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +2

Query: 83  PHTYPPICP*WER*VDNGC*LWLEIPYPKSRENLS 187
           PHT PP CP        GC L LE  YP   E+L+
Sbjct: 768 PHTVPPACP-----EPQGCYLELEFLYPLVPESLT 797


>sp|Q7TN83|SYT16_MOUSE Synaptotagmin-16 OS=Mus musculus GN=Syt16
           PE=1 SV=1
          Length = 639

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -2

Query: 156 ISSHSQQPLSTQRSHHGQMGGYVCGGAYNERKGEGSMEEGSMAVGEHF 13
           + SHS    STQ   HG +   + G +YN   G  S+E   M  G HF
Sbjct: 482 VVSHSDSASSTQSLSHGGVPELLVGLSYNATTGRLSVE---MIKGSHF 526
tr_hit_id A5BPP4
Definition tr|A5BPP4|A5BPP4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 147
Score (bit) 50.8
E-value 4.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912103|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_B09.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BPP4|A5BPP4_VITVI Putative uncharacterized protein OS=Vitis...    51   4e-05
tr|A5BQA4|A5BQA4_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5BRR6|A5BRR6_VITVI Putative uncharacterized protein OS=Vitis...    47   5e-04
tr|A5BX99|A5BX99_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|A5AWJ4|A5AWJ4_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|A5BZ82|A5BZ82_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|A5BU47|A5BU47_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|A5BSS4|A5BSS4_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|A5BW26|A5BW26_VITVI Putative uncharacterized protein OS=Vitis...    45   0.002
tr|A5C859|A5C859_VITVI Putative uncharacterized protein OS=Vitis...    45   0.002
tr|A5BLZ2|A5BLZ2_VITVI Putative uncharacterized protein OS=Vitis...    45   0.002
tr|Q9LJS5|Q9LJS5_ARATH TNP2-like transposon protein-like OS=Arab...    45   0.003
tr|A5AS16|A5AS16_VITVI Putative uncharacterized protein OS=Vitis...    45   0.003
tr|A5B592|A5B592_VITVI Putative uncharacterized protein OS=Vitis...    44   0.005
tr|A5B258|A5B258_VITVI Putative uncharacterized protein OS=Vitis...    44   0.005
tr|A5AWV0|A5AWV0_VITVI Putative uncharacterized protein OS=Vitis...    44   0.005
tr|A5B8X4|A5B8X4_VITVI Putative uncharacterized protein OS=Vitis...    44   0.007
tr|A5AM06|A5AM06_VITVI Putative uncharacterized protein OS=Vitis...    44   0.007
tr|A5BDR9|A5BDR9_VITVI Putative uncharacterized protein OS=Vitis...    43   0.009
tr|A5BUU3|A5BUU3_VITVI Putative uncharacterized protein OS=Vitis...    43   0.011
tr|A5BQ91|A5BQ91_VITVI Putative uncharacterized protein OS=Vitis...    43   0.011
tr|A5AUG2|A5AUG2_VITVI Putative uncharacterized protein OS=Vitis...    43   0.011
tr|A5ALA4|A5ALA4_VITVI Putative uncharacterized protein OS=Vitis...    43   0.011
tr|A5AKV0|A5AKV0_VITVI Putative uncharacterized protein OS=Vitis...    43   0.011
tr|A5AEN7|A5AEN7_VITVI Putative uncharacterized protein OS=Vitis...    42   0.015
tr|A5C549|A5C549_VITVI Putative uncharacterized protein OS=Vitis...    42   0.019
tr|A5AYH1|A5AYH1_VITVI Putative uncharacterized protein OS=Vitis...    42   0.019
tr|A5AL99|A5AL99_VITVI Putative uncharacterized protein OS=Vitis...    42   0.019
tr|Q9SPU5|Q9SPU5_MAIZE Putative transposase protein (Fragment) O...    42   0.025
tr|A5BPQ8|A5BPQ8_VITVI Putative uncharacterized protein OS=Vitis...    41   0.033

>tr|A5BPP4|A5BPP4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_011176 PE=4 SV=1
          Length = 522

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 39/147 (26%), Positives = 67/147 (45%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPEVFIDIKP*TLLGLDCIHNVFY*LL 351
           V+E+ +CG V+ RWM+  ERF++ LK +VR RS+PE              CI        
Sbjct: 290 VKEVRLCGPVYLRWMYPFERFMEVLKGYVRNRSRPE-------------GCI-------- 328

Query: 350 *SLMVSCVQASMAEGWIVQEAFVYVSQYLFTIDPSLPRLKMEEEDPNTHANIPSGKGSLL 171
               V C        +IV+EA  +  +YL  +D     + +   + N +   P   G ++
Sbjct: 329 ----VKC--------YIVEEAIEFCIEYLSNVDAIGIPISV---NINQNVGAPILGGQVV 373

Query: 170 ILDREFQAIVNNHCLLNAPIMGKWVDM 90
           I+D       +++ L N  I+  +++M
Sbjct: 374 IVDSNLWLHAHHYVLENTTIVQPYIEM 400


>tr|A5BQA4|A5BQA4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_021905 PE=4 SV=1
          Length = 809

 Score = 50.1 bits (118), Expect = 7e-05
 Identities = 40/146 (27%), Positives = 65/146 (44%)
 Frame = -3

Query: 530  VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPEVFIDIKP*TLLGLDCIHNVFY*LL 351
            V E+ +CG V+ RWM+  ERF+K LK +VR R++PE             DCI        
Sbjct: 700  VREVRLCGPVYLRWMYPFERFMKVLKGYVRNRNRPE-------------DCI-------- 738

Query: 350  *SLMVSCVQASMAEGWIVQEAFVYVSQYLFTIDPSLPRLKMEEEDPNTHANIPSGKGSLL 171
                        AE +I +EA  +  +YL  ID ++        D    A IP G+  ++
Sbjct: 739  ------------AECYIAEEAIEFCIEYLSNID-AIGIPISANIDQKVGAPIPGGQ--VV 783

Query: 170  ILDREFQAIVNNHCLLNAPIMGKWVD 93
             +D       +++ L N  I+  +++
Sbjct: 784  AVDSNLWLHAHHYVLENTTIVQPYIE 809


>tr|A5BRR6|A5BRR6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001546 PE=4 SV=1
          Length = 860

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPE 423
           V E+ +CG ++ RWM+  ERF+K LK +VR R+QPE
Sbjct: 182 VREVRLCGPIYLRWMYPFERFMKVLKGYVRNRNQPE 217


>tr|A5BX99|A5BX99_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_038839 PE=4 SV=1
          Length = 1388

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPEVFIDIKP*TLLGLDCIHNVFY*LL 351
           V E+ +CG V+ RWM+  ERF+K LK +VR R++P+              CI        
Sbjct: 505 VREVRLCGPVYLRWMYPFERFMKVLKGYVRNRNRPK-------------GCI-------- 543

Query: 350 *SLMVSCVQASMAEGWIVQEAFVYVSQYLFTIDP-SLPRLKMEEEDPNTHANIPSGKGSL 174
                       AE +IV+EA  + ++YL  I+   +P       + N     P   G +
Sbjct: 544 ------------AECYIVEEAIEFCTEYLSNIEAIEIP----ISANINQKVGAPIPGGQV 587

Query: 173 LILDREFQAIVNNHCLLNAPIMGKWVD 93
           + +D       ++  L N  I+  +++
Sbjct: 588 VAVDSNLSFHAHHSVLENTTIVQPYIE 614


>tr|A5AWJ4|A5AWJ4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_004106 PE=4 SV=1
          Length = 946

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPE 423
           V E+ +CG V+ RWM+  ERF+K LK +VR R++PE
Sbjct: 640 VREVRLCGPVYLRWMYPFERFMKVLKGYVRNRNRPE 675


>tr|A5BZ82|A5BZ82_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_006627 PE=4 SV=1
          Length = 987

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPE 423
           V E+ +CG V+ RWM   ERF+K LK +VR R+QPE
Sbjct: 187 VREVRLCGPVYLRWMCPFERFMKVLKGYVRNRNQPE 222


>tr|A5BU47|A5BU47_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_003642 PE=4 SV=1
          Length = 1783

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPE 423
           V E+ +CG V+ RWM+  ERF+K LK +VR R+ PE
Sbjct: 626 VREVRLCGPVYFRWMYPFERFMKVLKGYVRNRNHPE 661


>tr|A5BSS4|A5BSS4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_030496 PE=4 SV=1
          Length = 1464

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPE 423
           V E+ +CG V+ RWM+  ERF+K LK +VR R+ PE
Sbjct: 572 VREVRLCGPVYFRWMYPFERFMKVLKGYVRNRNHPE 607


>tr|A5BW26|A5BW26_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_038462 PE=4 SV=1
          Length = 1986

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPEVFI 414
           V E+ +CG ++ RWM+  ERF+K LK +VR R+ P+ +I
Sbjct: 141 VREVRLCGPIYLRWMYPFERFMKVLKGYVRNRNHPKGYI 179


>tr|A5C859|A5C859_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_036405 PE=4 SV=1
          Length = 1194

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
 Frame = -3

Query: 530 VEEIAICGVVHSRWMFFLERFLKTLKEFVRLRSQPEVFIDIKP*TLLGLDCIHNVFY*LL 351
           V E+ +CG V+ RWM+  ERF+K LK +VR  + PE              CI        
Sbjct: 601 VREVRLCGPVYFRWMYPFERFMKVLKGYVRNXNHPE-------------GCI-------- 639

Query: 350 *SLMVSCVQASMAEGWIVQEAFVYVSQYLFTIDPSLPRLKMEEEDPNTHANIPSG---KG 180
                        E +I +EA  + ++YL  +D ++        D    A IP G   K 
Sbjct: 640 ------------VECYIAEEAIEFCTEYLSNVD-AIGVPSSTNVDHKVGAPIPGGHITKV 686

Query: 179 SLLILDREFQAIVNNHCLLNAPIMGKWV 96
              +L +    ++ N  ++   I  KW+
Sbjct: 687 DCNLLLQAHHYVLENTTIIQPYIEQKWL 714