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NBDC - LSDB Archive
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BP912113
Clone id YMU001_000015_A01
Library
Length 233
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCGGTCCGCTGAAGAATAAGAGATGAGGATAAGTTGCATTCTCTACTCTTCCTCTTCCTC
TCTCTACTCTTCCTCTTCGTCTGTGATGAACTTTCCCGTACCCGGATTGATCGCTGCTAC
AAAGTAGAACGCGATCCATGCAAGAACAAGGGGCTCAATTTCAGTGAGGGGCACGCCTGT
CTCAATGTTCAACTGAGCAAGTGTACCCTTCCCTGTGATGATCTCACCAATGA
■■Homology search results ■■ -
sp_hit_id Q02060
Definition sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
Align length 51
Score (bit) 88.6
E-value 9.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912113|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_A01.
         (233 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...    89   9e-18
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...    86   6e-17
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...    86   6e-17
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...    86   6e-17
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...    85   1e-16
sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C ...    30   3.8  
sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily ...    30   3.8  
sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily ...    30   4.9  
sp|Q13UB5|ANMK_BURXL Anhydro-N-acetylmuramic acid kinase OS=Burk...    29   6.5  
sp|A6VL73|RBN_ACTSZ tRNA-processing ribonuclease BN OS=Actinobac...    29   8.4  

>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETGVP+ EIEPLVL  + F+F+AAINPGTGKFITD
Sbjct: 219 IGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITD 269



 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG L+QLN+ETG+P+ E EPL+L +I F  + AI      G+F+ +
Sbjct: 115 LGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE 167


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  I F+FVAAINPGTGKF+TD
Sbjct: 220 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTD 270



 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAIN--PGTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKFI D
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDD 166


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  IAF+F AAINPGTGKFITD
Sbjct: 222 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITD 272



 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+FI D
Sbjct: 116 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDD 168


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  IAF+F AAINPGTGKFITD
Sbjct: 222 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITD 272



 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ D
Sbjct: 116 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 40/51 (78%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETG+P+ +IEPLVL  +AF+F AAINPG GKFITD
Sbjct: 210 IGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITD 260



 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE +TGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ D
Sbjct: 106 LGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD 158


>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C
           member 2 OS=Rattus norvegicus GN=Kcnc2 PE=1 SV=1
          Length = 638

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 222 IITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAI--NPGTGKFI 85
           +I G   + Q  IET   LT +E + + W  F F+  I  +P   +FI
Sbjct: 264 VINGTSAVLQYEIETDPALTYVEGVCVVWFTFEFLVRIVFSPNKLEFI 311


>sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C
           member 2 OS=Homo sapiens GN=KCNC2 PE=2 SV=1
          Length = 638

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 222 IITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAI--NPGTGKFI 85
           +I G   + Q  IET   LT +E + + W  F F+  I  +P   +FI
Sbjct: 264 VINGTSVVLQYEIETDPALTYVEGVCVVWFTFEFLVRIVFSPNKLEFI 311


>sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily C
           member 2 OS=Mus musculus GN=Kcnc2 PE=1 SV=1
          Length = 642

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 222 IITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAI--NPGTGKFI 85
           +I G   + Q  IET   LT +E + + W  F F+  I  +P   +FI
Sbjct: 268 VINGTSPVLQYEIETDPALTYVEGVCVVWFTFEFLVRIVFSPNKLEFI 315


>sp|Q13UB5|ANMK_BURXL Anhydro-N-acetylmuramic acid kinase
           OS=Burkholderia xenovorans (strain LB400) GN=anmK PE=3
           SV=1
          Length = 376

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 177 GVPLTEIEPLVLAWIAFYFVAAINPGTGKFIT 82
           GVP +++EPL  AW+A   VA + PG    +T
Sbjct: 332 GVPPSQVEPLAFAWLAMRCVARL-PGNLPAVT 362


>sp|A6VL73|RBN_ACTSZ tRNA-processing ribonuclease BN
           OS=Actinobacillus succinogenes (strain ATCC 55618 /
           130Z) GN=rbn PE=3 SV=1
          Length = 287

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 195 QLNIETGVPLTEIEPLVLAWIAFYFVAAINP 103
           +LN+  G+ L    P +L W++F  + AI P
Sbjct: 164 ELNLPFGIKLLGFVPFILTWLSFTLIYAIVP 194
tr_hit_id B2ZAP6
Definition tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossypioides kirkii
Align length 51
Score (bit) 87.0
E-value 4.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912113|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_A01.
         (233 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...    87   4e-16
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...    87   5e-16
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...    87   5e-16
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...    86   7e-16
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...    86   7e-16
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...    86   9e-16
tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...    86   9e-16
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...    86   9e-16
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...    85   2e-15
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...    85   2e-15
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...    85   2e-15
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...    85   2e-15
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...    85   2e-15
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...    85   2e-15
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...    85   2e-15
tr|Q56ZF6|Q56ZF6_ARATH Photosystem II chlorophyll-binding protei...    85   2e-15
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...    85   2e-15
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...    83   8e-15
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...    83   8e-15
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...    83   8e-15
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...    82   1e-14
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...    80   7e-14
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...    80   7e-14
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...    78   3e-13
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...    75   2e-12
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    67   4e-10
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    65   2e-09
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...    64   3e-09
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...    57   6e-07
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    54   3e-06

>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETG+P+++IEPLVL  +AF+F AAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFAAAINPGTGKFVTD 273



 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+F+ +
Sbjct: 119 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE 171


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score = 86.7 bits (213), Expect = 5e-16
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETG+P+++IEPLVL  +AF+F AAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTD 273



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ +
Sbjct: 119 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 171


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score = 86.7 bits (213), Expect = 5e-16
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETG+P+++IEPLVL  +AF+F AAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTD 273



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ +
Sbjct: 119 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 171


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETGVP+ EIEPLVL  + F+F+AAINPGTGKF++D
Sbjct: 214 IGEIITGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSD 264



 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G F+ D
Sbjct: 109 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDD 161


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETGVP+ EIEPLVL  + F+F+AAINPGTGKF++D
Sbjct: 214 IGEIITGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSD 264



 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G F+ D
Sbjct: 109 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDD 161


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score = 85.9 bits (211), Expect = 9e-16
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  I F+FVAAINPGTGKF+TD
Sbjct: 220 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTD 270



 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKFI D
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDD 166


>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score = 85.9 bits (211), Expect = 9e-16
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  I F+FVAAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTD 273



 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKFI D
Sbjct: 117 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDD 169


>tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 272

 Score = 85.9 bits (211), Expect = 9e-16
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETG+P+ EIEPLVL  + F+F+AA+NPGTGKF+TD
Sbjct: 218 IGEIITGKGALAQLNIETGIPVNEIEPLVLFNVLFFFIAALNPGTGKFVTD 268



 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE ITGKG L+QLN+ETG+P+ E EPL+L +I F  + AI      G+F+ D
Sbjct: 114 LGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD 166


>tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0039K24.28 PE=4 SV=2
          Length = 248

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETGVP+ EIEPL+L  I F+F AAINPGTGKF+TD
Sbjct: 193 IGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTD 243



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE +TGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+F+ D
Sbjct: 90  LGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD 142


>tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza
           sativa subsp. japonica GN=PSII-S PE=2 SV=1
          Length = 254

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINPGTGKFITD 79
           IGEIITGKG LAQLNIETGVP+ EIEPL+L  I F+F AAINPGTGKF+TD
Sbjct: 199 IGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTD 249



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 231 IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFYFVAAINP--GTGKFITD 79
           +GE +TGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+F+ D
Sbjct: 96  LGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD 148