BP912115
Clone id YMU001_000015_B03
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTTGTAGCAATCCTGCATGACATTATATACATATGAATATCCATC
CAGTGTGATCAACCGGTTGGAGGATAGCTACTCAAGAGTCTTAAGCATTCAAAGCTCCTA
AACAAACTCTCCACAATATGTGAAGATCATTTACTTTTTACACAAAAACAACATTTTCAG
GCCTCATACAGATATGACCACTCCTTCTGGAAAAATGATCCCAAGCAGCACGCTCTACAG
AGGCTTTGAGAGCCAGCCAAGCTTGTTGCTTTCAAGGGATGTATGGATACTGCACAAATT
GCCGAAGCTTCCAAAAGCAATTTACAGGTCCAACAGAAGATGAGCATGCCTGTGTCAAAG
CATCCAATAGCTTCAAAATAACTGCCGATATATTTATGCTTGGCAGCATGATCTAAGAGC
TTTTATCGGTGCTTCCATCTCCACTCCAAGCGCGTCAGTGCATAATGCTTCAAAATTACT
CTCTGAACAAGGCCTCATACTCGCCAATCACAACTCATCCTCCC
■■Homology search results ■■ -
sp_hit_id P94459
Definition sp|P94459|PPSD_BACSU Plipastatin synthetase subunit D OS=Bacillus subtilis
Align length 64
Score (bit) 31.6
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912115|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_B03.
(506 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P94459|PPSD_BACSU Plipastatin synthetase subunit D OS=Bacillu... 32 2.2

>sp|P94459|PPSD_BACSU Plipastatin synthetase subunit D OS=Bacillus
subtilis GN=ppsD PE=1 SV=1
Length = 3603

Score = 31.6 bits (70), Expect = 2.2
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2

Query: 32 EYPSSVIN-RLEDSYSRVLSIQSS*TNSPQYVKIIYFLHKNNIFRPHTDMTTPSGKMIPS 208
+YP I+ LEDS + +L +QS+ + P++ I +L++ N H ++ P+ ++P
Sbjct: 1577 DYPEERISFLLEDSGTNILLLQSAGLHVPEFTGEIVYLNQTNSGLAHR-LSNPNVDVLPQ 1635

Query: 209 STLY 220
S Y
Sbjct: 1636 SLAY 1639


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912115|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_B03.
(506 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******