BP912116 |
Clone id |
YMU001_000015_C01 |
Library |
YMU01 |
Length |
406 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_C01. |
Accession |
BP912116 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAGGGAAAATGTTTACTGCCTCTGAAGTTCATGCAACGGGATCCTCAAAGGGTTTGTGAT GCCTGCTATGAAAGCTTAGAGCCCGTTCAGGGGTTCTTGATAGGTGTGAATAGCAATGCA TCCCAAATTGCAGTACATGATGTTACAGATTTAACATGCATGAGGGGATGGTTGAATAGT CCATTTGGGCTTGCGATGCAAGATGAAATATACAAAGCCACCAACACTTTAAGAAACTTC TGCAAGGTTGGTACGGTTAAAGCGGAGCATATGATACCAGAAGCTGTCCTTCGGGGAGCC AAAGGTCTGGCCATTTTAACAGTCGTTAAAGTAGGGATGATACTTACCTACAATGTGGGA ACTGGCCTGCTCGTTGCTCGAAGGAAGGATGATAGTTGGTCCCCGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P32793 |
Definition |
sp|P32793|YSC84_YEAST Protein YSC84 OS=Saccharomyces cerevisiae |
Align length |
78 |
Score (bit) |
66.2 |
E-value |
5.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912116|Adiantum capillus-veneris mRNA, clone: YMU001_000015_C01. (406 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P32793|YSC84_YEAST Protein YSC84 OS=Saccharomyces cerevisiae ... 66 5e-11 sp|P43603|LSB3_YEAST LAS seventeen-binding protein 3 OS=Saccharo... 63 4e-10 sp|A7A261|LSB3_YEAS7 LAS seventeen-binding protein 3 OS=Saccharo... 63 4e-10 sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02 OS=S... 59 7e-09 sp|Q5RAQ2|SH3Y1_PONAB SH3 domain-containing YSC84-like protein 1... 57 2e-08 sp|Q96HL8|SH3Y1_HUMAN SH3 domain-containing YSC84-like protein 1... 57 2e-08 sp|Q3SZ01|SH3Y1_BOVIN SH3 domain-containing YSC84-like protein 1... 56 5e-08 sp|B0BNA1|SH3Y1_RAT SH3 domain-containing YSC84-like protein 1 O... 56 6e-08 sp|O08641|SH3Y1_MOUSE SH3 domain-containing YSC84-like protein 1... 56 6e-08 sp|Q6DFH5|SH3Y1_XENLA SH3 domain-containing YSC84-like protein 1... 50 4e-06 sp|Q71FD7|FBLI1_MOUSE Filamin-binding LIM protein 1 OS=Mus muscu... 32 0.74 sp|Q5REN1|FBLI1_PONAB Filamin-binding LIM protein 1 OS=Pongo abe... 32 0.97 sp|Q8WUP2|FBLI1_HUMAN Filamin-binding LIM protein 1 OS=Homo sapi... 32 0.97 sp|Q2GFQ7|ARLY_EHRCR Argininosuccinate lyase OS=Ehrlichia chaffe... 32 0.97 sp|Q16X15|MED24_AEDAE Mediator of RNA polymerase II transcriptio... 31 1.7 sp|Q1JQB5|FBLI1_BOVIN Filamin-binding LIM protein 1 OS=Bos tauru... 31 1.7 sp|Q9UHR6|ZNHI2_HUMAN Zinc finger HIT domain-containing protein ... 30 3.7 sp|Q2TBW5|ZNHI2_BOVIN Zinc finger HIT domain-containing protein ... 30 3.7 sp|Q9LVR4|U496F_ARATH UPF0496 protein At5g66660 OS=Arabidopsis t... 30 4.8 sp|Q3YSS4|ARLY_EHRCJ Argininosuccinate lyase OS=Ehrlichia canis ... 29 6.3 sp|Q8R331|ZNHI1_MOUSE Zinc finger HIT domain-containing protein ... 29 8.2 sp|O43257|ZNHI1_HUMAN Zinc finger HIT domain-containing protein ... 29 8.2 sp|Q24JY4|ZNHI1_BOVIN Zinc finger HIT domain-containing protein ... 29 8.2 sp|Q5HNK5|ACCA_STAEQ Acetyl-coenzyme A carboxylase carboxyl tran... 29 8.2
>sp|P32793|YSC84_YEAST Protein YSC84 OS=Saccharomyces cerevisiae GN=YSC84 PE=1 SV=2 Length = 468
Score = 66.2 bits (160), Expect = 5e-11 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTV-KAEHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P +++ E KA LR+F K V A+ +IP VL+ AKGLAI+TV+K G + + Sbjct: 3 INNPIPRSLKSETKKAAKVLRSFVKPNQVFGADQVIPPYVLKRAKGLAIITVLKAGFLFS 62
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G++VAR KD +WS Sbjct: 63 GRAGSGVIVARLKDGTWS 80
>sp|P43603|LSB3_YEAST LAS seventeen-binding protein 3 OS=Saccharomyces cerevisiae GN=LSB3 PE=1 SV=3 Length = 459
Score = 63.2 bits (152), Expect = 4e-10 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTV-KAEHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P +++ E KA L +F K V A+ +IP VL+ AKGLAI+T++K G + + Sbjct: 3 INNPIPRSLKSETKKAAKILASFVKPNQVFGADQVIPPDVLKRAKGLAIITILKAGFLFS 62
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G++VAR KD +WS Sbjct: 63 GRAGSGVIVARLKDGTWS 80
>sp|A7A261|LSB3_YEAS7 LAS seventeen-binding protein 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=LSB3 PE=3 SV=2 Length = 459
Score = 63.2 bits (152), Expect = 4e-10 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTV-KAEHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P +++ E KA L +F K V A+ +IP VL+ AKGLAI+T++K G + + Sbjct: 3 INNPIPRSLKSETKKAAKILASFVKPNQVFGADQVIPPDVLKRAKGLAIITILKAGFLFS 62
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G++VAR KD +WS Sbjct: 63 GRAGSGVIVARLKDGTWS 80
>sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02 OS=Schizosaccharomyces pombe GN=SPAPJ696.02 PE=1 SV=1 Length = 430
Score = 58.9 bits (141), Expect = 7e-09 Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVG-TVKAEHMIPEAVLRGAKGLAILTVVKVGMILT 348 L++P +++ E KA L +F T+ A+ +IP +VL AKGL I+TV+K G + + Sbjct: 3 LHNPLPSSLKSECKKAGKILTSFVDPRQTLGAQEVIPPSVLTNAKGLVIMTVLKAGFLFS 62
Query: 349 YNVGTGLLVARRKDDSWS 402 +G+GL+VAR D +WS Sbjct: 63 GRIGSGLIVARLDDGTWS 80
>sp|Q5RAQ2|SH3Y1_PONAB SH3 domain-containing YSC84-like protein 1 OS=Pongo abelii GN=SH3YL1 PE=2 SV=1 Length = 342
Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTVKA-EHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P ++ E KA LR F ++ + + +IP V+ AKGLAIL+V+K G ++T Sbjct: 1 MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVT 60
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G++VAR D WS Sbjct: 61 ARGGSGIVVARLPDGKWS 78
>sp|Q96HL8|SH3Y1_HUMAN SH3 domain-containing YSC84-like protein 1 OS=Homo sapiens GN=SH3YL1 PE=1 SV=1 Length = 342
Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTVKA-EHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P ++ E KA LR F ++ + + +IP V+ AKGLAIL+V+K G ++T Sbjct: 1 MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVT 60
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G++VAR D WS Sbjct: 61 ARGGSGIVVARLPDGKWS 78
>sp|Q3SZ01|SH3Y1_BOVIN SH3 domain-containing YSC84-like protein 1 OS=Bos taurus GN=SH3YL1 PE=2 SV=1 Length = 341
Score = 56.2 bits (134), Expect = 5e-08 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTVKA-EHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P ++ E KA LR F ++ + + +IP V+ AKGLAIL+V+K G ++T Sbjct: 1 MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVT 60
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G+++AR D WS Sbjct: 61 ARGGSGIVLARLPDGKWS 78
>sp|B0BNA1|SH3Y1_RAT SH3 domain-containing YSC84-like protein 1 OS=Rattus norvegicus GN=Sh3yl1 PE=2 SV=1 Length = 340
Score = 55.8 bits (133), Expect = 6e-08 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTVKA-EHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P ++ E KA LR F ++ + + +IP V+ AKGLA+L+V+K G ++T Sbjct: 1 MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVT 60
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G+++AR D WS Sbjct: 61 ARGGSGIVLARLPDGKWS 78
>sp|O08641|SH3Y1_MOUSE SH3 domain-containing YSC84-like protein 1 OS=Mus musculus GN=Sh3yl1 PE=1 SV=1 Length = 340
Score = 55.8 bits (133), Expect = 6e-08 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTVKA-EHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P ++ E KA LR F ++ + + +IP V+ AKGLA+L+V+K G ++T Sbjct: 1 MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVT 60
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G+++AR D WS Sbjct: 61 ARGGSGIVLARLPDGKWS 78
>sp|Q6DFH5|SH3Y1_XENLA SH3 domain-containing YSC84-like protein 1 OS=Xenopus laevis GN=sh3yl1 PE=2 SV=1 Length = 335
Score = 49.7 bits (117), Expect = 4e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Frame = +1
Query: 172 LNSPFGLAMQDEIYKATNTLRNFCKVGTVKA-EHMIPEAVLRGAKGLAILTVVKVGMILT 348 +N+P ++ E KA L+ F + + + +IP V+ A+GLA+L+V+K G ++T Sbjct: 1 MNNPIPSNLKSESRKAAKILKEFTTISSRNGPDKIIPPHVIAKAQGLAVLSVIKAGFLVT 60
Query: 349 YNVGTGLLVARRKDDSWS 402 G+G+++AR WS Sbjct: 61 ARGGSGIVLARLPGGRWS 78
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQ90 |
Definition |
tr|A9TQ90|A9TQ90_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
133 |
Score (bit) |
186.0 |
E-value |
4.0e-46 |
Report |
|