BP912118 |
Clone id |
YMU001_000015_C10 |
Library |
YMU01 |
Length |
498 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_C10. |
Accession |
BP912118 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTAGAAACAAGCCACATTGAAGGGAGTGACTAGGATTAGTCAAGCTACTCCAATAGCCTT TGGGTTGATGCTTCTGTCCTGATCAACAAAGGTGCAGAGCAGACACAACTCTTATGGCAC TTAGGCAACTACATATCAATTCGCTGAGAGAATATTTGCTCAGGTAATATTATTTTCTAC ATAATGAATCACGGCCCGGAGGCATTTGCCTGCTTCCAGGATATCAAAAGCATGATTAAT GTCATCAGAGCTTGAAATTGTGGGTTACATACTCATCCAGCTTTATCTCCTTGTTCATGT AGGCATCTACCAGCTTGGTGAACATCGGTTCTACTTTTGTAGCCTCCAAAAGCAGTTCCT TTCCGACACTCTCCCAGTTACCAACTGAAAAGGGCTCGTGCTTATCTCCTGGCCTGATGC GGTCACTCCAACAATCACAGATGTTCCCCATCCTTTGATGCAAGATTCCATTGCTGCACG CATTACTGCTACATTCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0DWH1 |
Definition |
sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica |
Align length |
105 |
Score (bit) |
89.7 |
E-value |
7.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4SYL2 |
Definition |
tr|Q4SYL2|Q4SYL2_TETNG Chromosome 10 SCAF12030, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis |
Align length |
50 |
Score (bit) |
76.3 |
E-value |
1.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912118|Adiantum capillus-veneris mRNA, clone: YMU001_000015_C10. (498 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4SYL2|Q4SYL2_TETNG Chromosome 10 SCAF12030, whole genome sho... 76 1e-18 tr|B3RW57|B3RW57_TRIAD Putative uncharacterized protein OS=Trich... 74 2e-18 tr|A9SCG3|A9SCG3_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16 tr|Q6EE34|Q6EE34_XENLA Alcohol dehydrogenase 5 (Fragment) OS=Xen... 87 6e-16 tr|A9SZH7|A9SZH7_PHYPA Predicted protein OS=Physcomitrella paten... 86 1e-15 tr|Q2XPW7|Q2XPW7_SOLTU Alcohol dehydrogenase class III-like prot... 86 1e-15 tr|Q4V813|Q4V813_XENLA Adh3 protein (Alcohol dehydrogenase class... 85 2e-15 tr|Q5HZT1|Q5HZT1_XENTR Hypothetical LOC497007 (Alcohol dehydroge... 84 4e-15 tr|Q58JY0|Q58JY0_SOLPE Putative alcohol dehydrogenase class III ... 84 4e-15 tr|Q58JW2|Q58JW2_SOLCI Putative alcohol dehydrogenase class III ... 84 4e-15 tr|Q58JU2|Q58JU2_SOLHA Putative alcohol dehydrogenase class III ... 84 4e-15 tr|Q58JT0|Q58JT0_9SOLN Putative alcohol dehydrogenase class III ... 84 4e-15 tr|Q58JR0|Q58JR0_SOLPI Putative alcohol dehydrogenase class III ... 84 4e-15 tr|Q2SM18|Q2SM18_HAHCH Zn-dependent alcohol dehydrogenase, class... 84 5e-15 tr|Q3JBA9|Q3JBA9_NITOC Zinc-containing alcohol dehydrogenase sup... 83 6e-15 tr|B6C1Q1|B6C1Q1_9GAMM S-(Hydroxymethyl)glutathione dehydrogenas... 83 6e-15 tr|B3PF26|B3PF26_CELJU Alcohol dehydrogenase C OS=Cellvibrio jap... 82 1e-14 tr|Q90XD4|Q90XD4_DANRE Alcohol dehydrogenase OS=Danio rerio GN=a... 80 5e-14 tr|Q6NXA6|Q6NXA6_DANRE Alcohol dehydrogenase 5 OS=Danio rerio GN... 80 5e-14 tr|Q7P029|Q7P029_CHRVO Alcohol dehydrogenase class III OS=Chromo... 80 5e-14 tr|Q9NJC3|Q9NJC3_BRALA Alcohol dehydrogenase class 3 OS=Branchio... 80 5e-14 tr|B5XA77|B5XA77_SALSA Alcohol dehydrogenase class-3 OS=Salmo sa... 80 7e-14 tr|Q1QYW6|Q1QYW6_CHRSD Alcohol dehydrogenase GroES-like protein ... 80 7e-14 tr|Q00V72|Q00V72_OSTTA Alcohol dehydrogenase class III [Oryza sa... 80 7e-14 tr|B5FYB8|B5FYB8_TAEGU Putative alcohol dehydrogenase 5 (Class I... 79 9e-14 tr|Q6IRT1|Q6IRT1_HUMAN Alcohol dehydrogenase 5 (Class III), chi ... 79 9e-14 tr|Q6FI45|Q6FI45_HUMAN ADH5 protein OS=Homo sapiens GN=ADH5 PE=2... 79 9e-14 tr|Q5U043|Q5U043_HUMAN Alcohol dehydrogenase 5 (Class III), chi ... 79 9e-14 tr|A8IY20|A8IY20_CHLRE Formaldehyde dehydrogenase OS=Chlamydomon... 78 2e-13 tr|A4S7A9|A4S7A9_OSTLU Zn-containing alcohol dehydrogenase OS=Os... 78 2e-13
>tr|Q4SYL2|Q4SYL2_TETNG Chromosome 10 SCAF12030, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00010274001 PE=3 SV=1 Length = 968
Score = 76.3 bits (186), Expect(3) = 1e-18 Identities = 35/50 (70%), Positives = 41/50 (82%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCF 349 GNV +MRAA+E+C KGWGTSVI+GV A+GQEIST PFQLVTGR + F Sbjct: 871 GNVTIMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAF 920
Score = 33.9 bits (76), Expect(3) = 1e-18 Identities = 13/19 (68%), Positives = 18/19 (94%) Frame = -3
Query: 316 KLVDAYMNKEIKLDEYVTH 260 KLV+ YMNK++K+DE+VTH Sbjct: 931 KLVEDYMNKKLKVDEFVTH 949
Score = 26.2 bits (56), Expect(3) = 1e-18 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2
Query: 374 GECRKGTAFGGYKS 333 G KGTAFGGYKS Sbjct: 912 GRTWKGTAFGGYKS 925
Score = 33.9 bits (76), Expect = 4.4 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = -3
Query: 427 SDRIRPGDKHEPFS--VGNWESVGKELLLEAT-KVEPMFTKLVDAYMNKEIKLDEYVTHN 257 +D + P D EP S + G + LE T V+ M K AY+ K++ +DE++TH Sbjct: 241 TDFVNPKDHKEPISQVLSEMTGGGVDFSLECTGNVDVMMVK---AYLEKKVMVDEFITHK 297
Query: 256 FKL 248 L Sbjct: 298 MTL 300
>tr|B3RW57|B3RW57_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_55892 PE=4 SV=1 Length = 376
Score = 73.6 bits (179), Expect(3) = 2e-18 Identities = 34/50 (68%), Positives = 40/50 (80%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCF 349 GNV MRAA+ESC KGWGTSV++GV A+G+EIST PFQLVTGR + F Sbjct: 273 GNVHTMRAALESCHKGWGTSVVIGVAAAGKEISTRPFQLVTGRTWKGTAF 322
Score = 34.7 bits (78), Expect(3) = 2e-18 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3
Query: 313 LVDAYMNKEIKLDEYVTHNFKL 248 L + YMNKE+KLDE++TH L Sbjct: 334 LAERYMNKELKLDEFITHTMSL 355
Score = 27.3 bits (59), Expect(3) = 2e-18 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2
Query: 374 GECRKGTAFGGYKSRTDV 321 G KGTAFGG+KSR V Sbjct: 314 GRTWKGTAFGGWKSRDSV 331
>tr|A9SCG3|A9SCG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_183406 PE=3 SV=1 Length = 380
Score = 88.6 bits (218), Expect = 1e-16 Identities = 52/104 (50%), Positives = 63/104 (60%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCFWRLQK*NRCS 319 GNV VMR+A+E C KGWGTSVI+GV ASGQEIST PFQLVTGRV + F + ++ Sbjct: 273 GNVHVMRSALECCHKGWGTSVIIGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQV- 331
Query: 318 PSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVI 187 P + DDIN AFD+L +GKCLR V+ Sbjct: 332 PELVEKYLKKEIKVDEYITHNMKLDDINEAFDLLHSGKCLRCVL 375
>tr|Q6EE34|Q6EE34_XENLA Alcohol dehydrogenase 5 (Fragment) OS=Xenopus laevis PE=2 SV=1 Length = 376
Score = 86.7 bits (213), Expect = 6e-16 Identities = 51/108 (47%), Positives = 66/108 (61%), Gaps = 2/108 (1%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCF--WRLQK*NR 325 GNV VMR+A+E+C KGWGTSVIVGV ASGQEI+T PFQLVTGRV + F W+ Sbjct: 272 GNVRVMRSALEACHKGWGTSVIVGVAASGQEIATRPFQLVTGRVWKGTAFGGWKSVD--- 328
Query: 324 CSPSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVIHY 181 P T++ D IN AF+++ AGK +R+V++Y Sbjct: 329 SVPKLVSEYMTKKIKVDEFVTHTLPFDSINEAFELMHAGKSIRSVLNY 376
>tr|A9SZH7|A9SZH7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137950 PE=3 SV=1 Length = 394
Score = 85.9 bits (211), Expect = 1e-15 Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCFWRLQK*NRCS 319 GNV VMRAA+E+C KGWGTSVIVGV A+GQEIST PFQLVTGRV + F + +R Sbjct: 288 GNVQVMRAALEACHKGWGTSVIVGVAAAGQEISTRPFQLVTGRVWKGTAFGGYK--SRTD 345
Query: 318 PSW*MPT*TRR*SWMSM*PTIS-SSDDINHAFDILEAGKCLRAVIH 184 + ++ + T IN AF +LEAGKCLRAVI+ Sbjct: 346 VPKLVDEYMKQEIKLDEYITHKFPLGKINEAFGLLEAGKCLRAVIN 391
>tr|Q2XPW7|Q2XPW7_SOLTU Alcohol dehydrogenase class III-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 379
Score = 85.5 bits (210), Expect = 1e-15 Identities = 52/104 (50%), Positives = 63/104 (60%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCFWRLQK*NRCS 319 GNV+VMRAA+E C KGWGTSVIVGV ASGQEIST PFQLVTGRV + F + ++ Sbjct: 273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQV- 331
Query: 318 PSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVI 187 PS + + DIN AFD++ G CLR V+ Sbjct: 332 PSLVDKYLKKEIKVDEYITHSMTLADINKAFDLMHDGDCLRVVL 375
>tr|Q4V813|Q4V813_XENLA Adh3 protein (Alcohol dehydrogenase class 3) OS=Xenopus laevis GN=adh5p4 PE=2 SV=1 Length = 376
Score = 84.7 bits (208), Expect = 2e-15 Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 2/108 (1%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCF--WRLQK*NR 325 GNV VMR+A+E+C KGWGTSVIVGV ASGQEI+T PFQLVTGRV + F W+ Sbjct: 272 GNVRVMRSALEACHKGWGTSVIVGVAASGQEIATRPFQLVTGRVWKGTAFGGWKSVD--- 328
Query: 324 CSPSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVIHY 181 P ++ D IN AF+++ AGK +R+V++Y Sbjct: 329 SVPKLVSEYMAKKIKVDEFVTHTLPFDSINEAFELMHAGKSIRSVLNY 376
>tr|Q5HZT1|Q5HZT1_XENTR Hypothetical LOC497007 (Alcohol dehydrogenase 5 (Class III), chi polypeptide) OS=Xenopus tropicalis GN=adh5p4 PE=2 SV=1 Length = 376
Score = 84.0 bits (206), Expect = 4e-15 Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCF--WRLQK*NR 325 GNV VMRAA+E+C KGWGTSVIVGV ASGQEI+T PFQLVTGRV + F W+ Sbjct: 272 GNVGVMRAALEACHKGWGTSVIVGVAASGQEIATRPFQLVTGRVWKGTAFGGWKSVD--- 328
Query: 324 CSPSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVIHY 181 P ++ + IN AF+++ AGK +R V++Y Sbjct: 329 SVPKLVSEYMAKKIKVDEFVTHTLPFNSINEAFELMHAGKSIRGVLNY 376
>tr|Q58JY0|Q58JY0_SOLPE Putative alcohol dehydrogenase class III (Fragment) OS=Solanum peruvianum GN=CT208 PE=4 SV=1 Length = 144
Score = 84.0 bits (206), Expect = 4e-15 Identities = 51/104 (49%), Positives = 63/104 (60%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCFWRLQK*NRCS 319 GNV+VMR+A+E C KGWGTSVIVGV ASGQEIST PFQLVTGRV + F + ++ Sbjct: 38 GNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQV- 96
Query: 318 PSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVI 187 PS + + DIN AFD++ G CLR V+ Sbjct: 97 PSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGDCLRVVL 140
>tr|Q58JW2|Q58JW2_SOLCI Putative alcohol dehydrogenase class III (Fragment) OS=Solanum chilense GN=CT208 PE=4 SV=1 Length = 144
Score = 84.0 bits (206), Expect = 4e-15 Identities = 51/104 (49%), Positives = 63/104 (60%) Frame = -1
Query: 498 GNVAVMRAAMESCIKGWGTSVIVGVTASGQEISTSPFQLVTGRVSERNCFWRLQK*NRCS 319 GNV+VMR+A+E C KGWGTSVIVGV ASGQEIST PFQLVTGRV + F + ++ Sbjct: 38 GNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQV- 96
Query: 318 PSW*MPT*TRR*SWMSM*PTISSSDDINHAFDILEAGKCLRAVI 187 PS + + DIN AFD++ G CLR V+ Sbjct: 97 PSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGDCLRVVL 140
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