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BP912120
Clone id YMU001_000015_D01
Library
Length 500
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGAGGCTTAGCATCAGCCATATTAAATTTGTCAAGTACTTTTGCAATGTACCTTTCTTGA
GATAAAAACACCAATTTTAGCTTTCCGTCTCTTTTAATACGCATGCTCAAATATGCTCTG
CATCACCCAAATCTTTCATAGCAAAAGCTGAATTTAGCTTACGTTTCAAAGCATCAAGAC
TAGTCTTATGTTTCCCGGCAAGCAGCATGTCATCAATATAGAGAACAAGTATGATGGGAC
TACCATCTTCATCCCTTTTTGTATACAAACAATGATCTCCATGGTTGCGTTTAAAGCCTT
GAGACAGCATAAAAGTGTCAAACTTCTTAAACCACTGCCGTGATGATTGTCTCAAACCAT
AGAGAGTCCTTTTCAATTTGCATACAAGTTCCTCGACGCATAGGAACTACAAAACCTTCA
GGTTGTTTCATGTATATGTCCTTTCAATGTCACCATGCAAAAACGTTGTCTTTACATCCA
TTTGATTCAATTCCAAATCA
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 130
Score (bit) 124.0
E-value 3.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912120|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_D01.
         (500 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra...   124   3e-28
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G...    76   2e-16
sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W O...    63   2e-10
sp|Q04214|YM13B_YEAST Transposon Ty1-MR1 Gag-Pol polyprotein OS=...    55   1e-07
sp|Q12112|YN11B_YEAST Transposon Ty1-NL1 Gag-Pol polyprotein OS=...    55   2e-07
sp|P0C2I7|YL14B_YEAST Transposon Ty1-LR4 Gag-Pol polyprotein OS=...    55   2e-07
sp|P47100|YJ12B_YEAST Transposon Ty1-JR2 Gag-Pol polyprotein OS=...    55   2e-07
sp|P0C2I3|YD15B_YEAST Transposon Ty1-DR6 Gag-Pol polyprotein OS=...    55   2e-07
sp|Q07793|YD13B_YEAST Transposon Ty1-DR4 Gag-Pol polyprotein OS=...    55   2e-07
sp|Q07163|TY1AB_YEAST Transposon TyH3 Gag-Pol polyprotein OS=Sac...    55   2e-07
sp|Q92393|YO12B_YEAST Transposon Ty1-OR Gag-Pol polyprotein OS=S...    54   3e-07
sp|Q12316|YG13B_YEAST Transposon Ty1-GR3 Gag-Pol polyprotein OS=...    54   3e-07
sp|Q12141|YG11B_YEAST Transposon Ty1-GR1 Gag-Pol polyprotein OS=...    54   3e-07
sp|Q12193|YB12B_YEAST Transposon Ty1-BR Gag-Pol polyprotein OS=S...    54   3e-07
sp|Q12490|YB11B_YEAST Transposon Ty1-BL Gag-Pol polyprotein OS=S...    54   3e-07
sp|Q03855|YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polyprotein OS=...    54   5e-07
sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein OS=...    52   1e-06
sp|Q12414|YP11B_YEAST Transposon Ty1-PL Gag-Pol polyprotein OS=S...    52   1e-06
sp|Q12273|YO11B_YEAST Transposon Ty1-OL Gag-Pol polyprotein OS=S...    52   1e-06
sp|Q04670|YM14B_YEAST Transposon Ty1-MR2 Gag-Pol polyprotein OS=...    52   1e-06
sp|Q03434|YM12B_YEAST Transposon Ty1-ML2 Gag-Pol polyprotein OS=...    52   1e-06
sp|Q04711|YM11B_YEAST Transposon Ty1-ML1 Gag-Pol polyprotein OS=...    52   1e-06
sp|P0C2I5|YL12B_YEAST Transposon Ty1-LR2 Gag-Pol polyprotein OS=...    52   1e-06
sp|Q12088|YL11B_YEAST Transposon Ty1-LR1 Gag-Pol polyprotein OS=...    52   1e-06
sp|P47024|YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprotein OS=Sa...    52   1e-06
sp|P0C2J7|YH41B_YEAST Transposon Ty4-H Gag-Pol polyprotein OS=Sa...    52   1e-06
sp|O13535|YH11B_YEAST Transposon Ty1-H Gag-Pol polyprotein OS=Sa...    52   1e-06
sp|Q12269|YG12B_YEAST Transposon Ty1-GR2 Gag-Pol polyprotein OS=...    52   1e-06
sp|Q03619|YE12B_YEAST Transposon Ty1-ER2 Gag-Pol polyprotein OS=...    52   1e-06
sp|Q03612|YE11B_YEAST Transposon Ty1-ER1 Gag-Pol polyprotein OS=...    52   1e-06

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
            transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
          Length = 1328

 Score =  124 bits (310), Expect = 3e-28
 Identities = 61/130 (46%), Positives = 86/130 (66%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLE+ Q+DVKT FLHGD+E        +       + +VCKL ++LYGL+Q+ RQW+ KF
Sbjct: 915  DLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKF 974

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FM SQ + + + D C+Y KR  + + IIL+LY+DDML+ GK K  +  LK  L+ +F 
Sbjct: 975  DSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFD 1034

Query: 139  MKDLGDAEHI 110
            MKDLG A+ I
Sbjct: 1035 MKDLGPAQQI 1044



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = -1

Query: 149  SFCYERFG*CRAYLSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            SF  +  G  +  L M+I R+   + ++LSQE+YI +VL++FNM +AKP
Sbjct: 1032 SFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKP 1080


>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP
            PE=1 SV=3
          Length = 1409

 Score = 76.3 bits (186), Expect(2) = 2e-16
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            +L+++QMDVKT FL+G ++        + +   C  + VCKL + +YGL+Q++R WF+ F
Sbjct: 995  NLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVF 1052

Query: 319  DTFMLSQGFKRNHGDHCLY-TKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAF 143
            +  +    F  +  D C+Y   +      I ++LY+DD+++A    T ++  KR L   F
Sbjct: 1053 EQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKF 1112

Query: 142  AMKDLGDAEH 113
             M DL + +H
Sbjct: 1113 RMTDLNEIKH 1122



 Score = 28.1 bits (61), Expect(2) = 2e-16
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 71   VFLSQERYIAKVLDKFNM 18
            ++LSQ  Y+ K+L KFNM
Sbjct: 1135 IYLSQSAYVKKILSKFNM 1152


>sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W
           OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2
          Length = 308

 Score = 62.8 bits (151), Expect(2) = 2e-10
 Identities = 31/92 (33%), Positives = 53/92 (57%)
 Frame = -2

Query: 391 ELVCKLKRTLYGLRQSSRQWFKKFDTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYID 212
           + V +L   +YGL+Q+   W +  +  +   GF R+ G+H LY +   DG PI + +Y+D
Sbjct: 31  DYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDG-PIYIAVYVD 89

Query: 211 DMLLAGKHKTSLDALKRKLNSAFAMKDLGDAE 116
           D+L+A       D +K++L   ++MKDLG  +
Sbjct: 90  DLLVAAPSPKIYDRVKQELTKLYSMKDLGKVD 121



 Score = 21.6 bits (44), Expect(2) = 2e-10
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 437 IYMKQPEGFV 408
           IY+KQP GFV
Sbjct: 16  IYVKQPPGFV 25


>sp|Q04214|YM13B_YEAST Transposon Ty1-MR1 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-MR1 PE=1 SV=2
          Length = 1755

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 34/129 (26%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++     + S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIKQCGMEEVRGWSCVF-----ENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461


>sp|Q12112|YN11B_YEAST Transposon Ty1-NL1 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-NL1 PE=3 SV=1
          Length = 1755

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++       S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIQQCGMEEVRGWSCVF-----KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461


>sp|P0C2I7|YL14B_YEAST Transposon Ty1-LR4 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-LR4 PE=3 SV=1
          Length = 1755

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++       S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIQQCGMEEVRGWSCVF-----KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461


>sp|P47100|YJ12B_YEAST Transposon Ty1-JR2 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-JR2 PE=1 SV=3
          Length = 1755

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++       S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIQQCGMEEVRGWSCVF-----KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461


>sp|P0C2I3|YD15B_YEAST Transposon Ty1-DR6 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-DR6 PE=3 SV=1
          Length = 1755

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++       S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIQQCGMEEVRGWSCVF-----KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461


>sp|Q07793|YD13B_YEAST Transposon Ty1-DR4 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-DR4 PE=3 SV=2
          Length = 1604

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++       S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIQQCGMEEVRGWSCVF-----KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461


>sp|Q07163|TY1AB_YEAST Transposon TyH3 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B PE=1 SV=2
          Length = 1755

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 490  LNQMDVKTTFLHGDI-ERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKFDT 314
            + Q+D+ + +L+ DI E  Y    ++    L + + + +LK++LYGL+QS   W++   +
Sbjct: 1342 ITQLDISSAYLYADIKEELY----IRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKS 1397

Query: 313  FMLSQ-GFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFAM 137
            +++ Q G +   G  C++       S + + L++DDM+L  K+  S   +  KL   +  
Sbjct: 1398 YLIQQCGMEEVRGWSCVF-----KNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDT 1452

Query: 136  K--DLGDAE 116
            K  +LG+++
Sbjct: 1453 KIINLGESD 1461
tr_hit_id Q8W5D4
Definition tr|Q8W5D4|Q8W5D4_ORYSA Putative retrotransposon-related protein OS=Oryza sativa
Align length 124
Score (bit) 129.0
E-value 4.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912120|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_D01.
         (500 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8W5D4|Q8W5D4_ORYSA Putative retrotransposon-related protein ...   129   4e-35
tr|Q7G640|Q7G640_ORYSJ Putative retrotransposon protein (Retrotr...   129   4e-35
tr|Q6AUC7|Q6AUC7_ORYSJ Putative polyprotein OS=Oryza sativa subs...   132   3e-34
tr|Q0J4E9|Q0J4E9_ORYSJ Os08g0518300 protein OS=Oryza sativa subs...   131   8e-34
tr|Q0DX39|Q0DX39_ORYSJ Os02g0776400 protein OS=Oryza sativa subs...   141   2e-32
tr|Q75HA9|Q75HA9_ORYSJ Putative polyprotein (Retrotransposon pro...   140   3e-32
tr|Q9SHR5|Q9SHR5_ARATH F28L22.3 protein OS=Arabidopsis thaliana ...   124   3e-32
tr|Q2QUC6|Q2QUC6_ORYSJ Retrotransposon protein, putative, Ty1-co...   137   5e-32
tr|Q2QP43|Q2QP43_ORYSJ Retrotransposon protein, putative, Ty1-co...   139   1e-31
tr|A5BE52|A5BE52_VITVI Putative uncharacterized protein OS=Vitis...   124   2e-31
tr|Q75IK3|Q75IK3_ORYSJ Putative polyprotein OS=Oryza sativa subs...   137   2e-31
tr|Q2QSQ2|Q2QSQ2_ORYSJ Retrotransposon protein, putative, Ty1-co...   137   2e-31
tr|Q8LNW7|Q8LNW7_ORYSJ Putative polyprotein OS=Oryza sativa subs...   137   3e-31
tr|Q7G2K5|Q7G2K5_ORYSJ Retrotransposon protein, putative, Ty1-co...   137   3e-31
tr|Q2QP36|Q2QP36_ORYSJ Retrotransposon protein, putative, Ty1-co...   137   4e-31
tr|Q7XP09|Q7XP09_ORYSJ OSJNBb0013J13.11 protein OS=Oryza sativa ...   136   5e-31
tr|Q53ND1|Q53ND1_ORYSJ Os11g0157000 protein OS=Oryza sativa subs...   135   1e-30
tr|Q25A78|Q25A78_ORYSA H0413E07.4 protein OS=Oryza sativa GN=H04...   135   1e-30
tr|Q25A71|Q25A71_ORYSA H0306F03.15 protein OS=Oryza sativa GN=H0...   135   1e-30
tr|Q5JQU4|Q5JQU4_ORYSA OSJNBa0061C06.9 protein OS=Oryza sativa G...   134   3e-30
tr|Q53QA4|Q53QA4_ORYSJ Retrotransposon protein, putative, Ty1-co...   133   4e-30
tr|Q2QQ81|Q2QQ81_ORYSJ Retrotransposon protein, putative, Ty1-co...   133   4e-30
tr|Q2QPE3|Q2QPE3_ORYSJ Retrotransposon protein, putative, Ty1-co...   133   4e-30
tr|Q0IN60|Q0IN60_ORYSJ Os12g0503600 protein OS=Oryza sativa subs...   133   4e-30
tr|Q0E1G5|Q0E1G5_ORYSJ Os02g0450400 protein OS=Oryza sativa subs...   133   4e-30
tr|Q01M93|Q01M93_ORYSA OSIGBa0146N20.7 protein OS=Oryza sativa G...   133   4e-30
tr|A5AER2|A5AER2_VITVI Putative uncharacterized protein OS=Vitis...   126   6e-30
tr|O82196|O82196_ARATH Copia-like retroelement pol polyprotein O...   117   1e-29
tr|Q5JQV7|Q5JQV7_ORYSA OSJNBa0061C06.5 protein OS=Oryza sativa G...   131   2e-29
tr|Q2QW17|Q2QW17_ORYSJ Retrotransposon protein, putative, Ty1-co...   131   2e-29

>tr|Q8W5D4|Q8W5D4_ORYSA Putative retrotransposon-related protein
            OS=Oryza sativa GN=OSJNBb0008A05.26 PE=4 SV=1
          Length = 1229

 Score =  129 bits (323), Expect(2) = 4e-35
 Identities = 67/124 (54%), Positives = 88/124 (70%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL Q+DVKT FLHG++E     +  +       E+ VCKLKR+LYGL+QS RQW+K+F
Sbjct: 857  DLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRF 916

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLS GFKR+  D C+Y K   +GS I L+LY+DDML+A K K  +  LK++L+S F 
Sbjct: 917  DSFMLSHGFKRSEFDSCVYIK-FVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFD 975

Query: 139  MKDL 128
            MKDL
Sbjct: 976  MKDL 979



 Score = 42.4 bits (98), Expect(2) = 4e-35
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -1

Query: 110  LSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            L M I RD    L+FLSQ+ YI KVL +FN+ DAKP
Sbjct: 986  LGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKP 1021


>tr|Q7G640|Q7G640_ORYSJ Putative retrotransposon protein
            (Retrotransposon protein, putative, Ty1-copia subclass,
            expressed) OS=Oryza sativa subsp. japonica
            GN=OSJNAb0008A05.17 PE=4 SV=1
          Length = 1229

 Score =  129 bits (323), Expect(2) = 4e-35
 Identities = 67/124 (54%), Positives = 88/124 (70%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL Q+DVKT FLHG++E     +  +       E+ VCKLKR+LYGL+QS RQW+K+F
Sbjct: 857  DLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRF 916

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLS GFKR+  D C+Y K   +GS I L+LY+DDML+A K K  +  LK++L+S F 
Sbjct: 917  DSFMLSHGFKRSEFDSCVYIK-FVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFD 975

Query: 139  MKDL 128
            MKDL
Sbjct: 976  MKDL 979



 Score = 42.4 bits (98), Expect(2) = 4e-35
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -1

Query: 110  LSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            L M I RD    L+FLSQ+ YI KVL +FN+ DAKP
Sbjct: 986  LGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKP 1021


>tr|Q6AUC7|Q6AUC7_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
            japonica GN=OSJNBa0079H23.15 PE=4 SV=1
          Length = 1241

 Score =  132 bits (332), Expect(2) = 3e-34
 Identities = 69/130 (53%), Positives = 91/130 (70%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            D EL QMDVKT FLHG++E        +       E LVC+LK++LYGL+QS RQW+K+F
Sbjct: 830  DYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 889

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLSQ F+R++ D C+Y K   DGS I L+LY+DDML+A K K+ +  LK +L+S F 
Sbjct: 890  DSFMLSQKFRRSNYDSCVYLK-VVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFE 948

Query: 139  MKDLGDAEHI 110
            MKDLG A+ I
Sbjct: 949  MKDLGAAKKI 958



 Score = 35.8 bits (81), Expect(2) = 3e-34
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = -1

Query: 128  G*CRAYLSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAK 6
            G  +  L M I R+     ++LSQ+ YI KVL +FNM DAK
Sbjct: 953  GAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAK 993


>tr|Q0J4E9|Q0J4E9_ORYSJ Os08g0518300 protein OS=Oryza sativa subsp.
            japonica GN=Os08g0518300 PE=4 SV=1
          Length = 1755

 Score =  131 bits (329), Expect(2) = 8e-34
 Identities = 68/130 (52%), Positives = 91/130 (70%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            D EL QMD KT FLHG++E        +       E LVC+LK++LYGL+QS RQW+K+F
Sbjct: 1272 DYELEQMDGKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 1331

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLSQ F+R++ D C+Y K   DGS I L+LY+DDML+A K K+ ++ LK +L+S F 
Sbjct: 1332 DSFMLSQKFRRSNYDSCVYLK-VVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFE 1390

Query: 139  MKDLGDAEHI 110
            MKDLG A+ I
Sbjct: 1391 MKDLGAAKKI 1400



 Score = 35.8 bits (81), Expect(2) = 8e-34
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = -1

Query: 128  G*CRAYLSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            G  +  L M I R+     ++LSQ+ Y  KVL +FNM DAKP
Sbjct: 1395 GAAKKILGMEITRERHSGKLYLSQKCYSEKVLRRFNMHDAKP 1436


>tr|Q0DX39|Q0DX39_ORYSJ Os02g0776400 protein OS=Oryza sativa subsp.
            japonica GN=Os02g0776400 PE=4 SV=1
          Length = 1315

 Score =  141 bits (355), Expect = 2e-32
 Identities = 76/156 (48%), Positives = 103/156 (66%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL Q+DVKTTFLHG++E     +  +       E+ VCKLKR+LYGL+QS RQW+K+F
Sbjct: 995  DLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 1054

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLS GFKR+  D C+Y K   +GSPI L+LYIDDML+A K K  +  LK++L+S F 
Sbjct: 1055 DSFMLSHGFKRSEFDSCVYIK-FVNGSPIYLLLYIDDMLIAAKSKEQITTLKKQLSSEFD 1113

Query: 139  MKDLGDAEHI*ACVLKETES*NWCFYLKKGTLQKYL 32
            MKDLG A+ I    +    +    F  ++  ++K L
Sbjct: 1114 MKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVL 1149



 Score = 45.8 bits (107), Expect = 0.001
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -1

Query: 146  FCYERFG*CRAYLSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            F  +  G  +  L M I RD    L+FLSQ+ YI KVL +FNM DAKP
Sbjct: 1112 FDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKP 1159


>tr|Q75HA9|Q75HA9_ORYSJ Putative polyprotein (Retrotransposon protein,
            putative, Ty1-copia subclass) (Integrase core domain
            containing protein) OS=Oryza sativa subsp. japonica
            GN=OSJNBa0056E06.5 PE=4 SV=1
          Length = 1322

 Score =  140 bits (354), Expect = 3e-32
 Identities = 75/156 (48%), Positives = 103/156 (66%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL Q+DVKTTFLHG++E     +  +       E+ VCKLKR+LYGL+QS RQW+K+F
Sbjct: 911  DLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 970

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLS GFKR+  D C+Y K   +GSPI L+LY+DDML+A K K  +  LK++L+S F 
Sbjct: 971  DSFMLSHGFKRSEFDSCVYIK-FVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFD 1029

Query: 139  MKDLGDAEHI*ACVLKETES*NWCFYLKKGTLQKYL 32
            MKDLG A+ I    +    +    F  ++  ++K L
Sbjct: 1030 MKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVL 1065



 Score = 45.8 bits (107), Expect = 0.001
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -1

Query: 146  FCYERFG*CRAYLSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            F  +  G  +  L M I RD    L+FLSQ+ YI KVL +FNM DAKP
Sbjct: 1028 FDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKP 1075


>tr|Q9SHR5|Q9SHR5_ARATH F28L22.3 protein OS=Arabidopsis thaliana
            GN=F28L22.3 PE=4 SV=1
          Length = 1356

 Score =  124 bits (312), Expect(2) = 3e-32
 Identities = 64/130 (49%), Positives = 84/130 (64%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL QMDVKTTFLHGD+E        +       E  VC+LK++LYGL+QS RQW K+F
Sbjct: 944  DLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRF 1003

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D FM SQ F R+  D C+Y K   +   I L+LY+DDML+AG  K  ++ +K +L++ F 
Sbjct: 1004 DRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFE 1063

Query: 139  MKDLGDAEHI 110
            MKD+G A  I
Sbjct: 1064 MKDMGGASRI 1073



 Score = 37.0 bits (84), Expect(2) = 3e-32
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 110  LSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAK 6
            L + I RD K  ++ LSQE YI KVLD+FNM+ AK
Sbjct: 1074 LGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAK 1108


>tr|Q2QUC6|Q2QUC6_ORYSJ Retrotransposon protein, putative, Ty1-copia
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g16710 PE=4 SV=1
          Length = 966

 Score =  137 bits (344), Expect(2) = 5e-32
 Identities = 69/128 (53%), Positives = 92/128 (71%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL Q+DVKTTFLHG++E     +  +       E+ +CKLKR+LY L+QS RQW+K+F
Sbjct: 717  DLELEQLDVKTTFLHGELEEEIYMDQPEEFIIPSKEDYICKLKRSLYDLKQSPRQWYKRF 776

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLS+GFKR+  D C+Y K   +GSPI L+LY+DDML+A K K  +  LK++L S F 
Sbjct: 777  DSFMLSRGFKRSEYDSCVYIK-FINGSPIYLLLYVDDMLIAAKSKEEITILKKQLTSEFE 835

Query: 139  MKDLGDAE 116
            MKDLG A+
Sbjct: 836  MKDLGVAK 843



 Score = 23.9 bits (50), Expect(2) = 5e-32
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 62  SQERYIAKVLDKFNMADAKP 3
           +Q+    KVL  FNM DAKP
Sbjct: 847 NQQSNNKKVLQHFNMHDAKP 866


>tr|Q2QP43|Q2QP43_ORYSJ Retrotransposon protein, putative, Ty1-copia
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g35740 PE=4 SV=1
          Length = 1136

 Score =  139 bits (349), Expect = 1e-31
 Identities = 71/130 (54%), Positives = 94/130 (72%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            DLEL Q+ VKTTFLHG++E     + L+       E+ VCKLKR+LYGL+QS RQW+K+F
Sbjct: 671  DLELEQLGVKTTFLHGELEEEIYIDQLEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 730

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D+FMLS GFKR+  D C+Y K   +GSPI L+LY+DDML+A K K  +  LK++L+S F 
Sbjct: 731  DSFMLSHGFKRSEFDSCVYIK-FVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFD 789

Query: 139  MKDLGDAEHI 110
            M+DLG A+ I
Sbjct: 790  MEDLGAAKKI 799


>tr|A5BE52|A5BE52_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_039063 PE=4 SV=1
          Length = 1643

 Score =  124 bits (311), Expect(2) = 2e-31
 Identities = 64/130 (49%), Positives = 88/130 (67%)
 Frame = -2

Query: 499  DLELNQMDVKTTFLHGDIERTYT*NNLKVL*FLCVEELVCKLKRTLYGLRQSSRQWFKKF 320
            +LEL+Q+DVKT FLHG++E        +        + VC LK++LYGL+QS RQW+K+F
Sbjct: 1220 NLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRF 1279

Query: 319  DTFMLSQGFKRNHGDHCLYTKRDEDGSPIILVLYIDDMLLAGKHKTSLDALKRKLNSAFA 140
            D FM+S  F RN  D C+Y K   DGS I L+LY+DDML+A K++  ++ LK+ L+S F 
Sbjct: 1280 DAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFE 1339

Query: 139  MKDLGDAEHI 110
            MKDLG A+ I
Sbjct: 1340 MKDLGAAKKI 1349



 Score = 34.7 bits (78), Expect(2) = 2e-31
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = -1

Query: 128  G*CRAYLSMRIKRDGKLKLVFLSQERYIAKVLDKFNMADAKP 3
            G  +  L M I RD    L+++SQ++YI K++  F+M  +KP
Sbjct: 1344 GAAKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAFHMDHSKP 1385