BP912129
Clone id YMU001_000015_D11
Library
Length 268
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCTAGTTCATAACATACTGCCTCATTGCACTAAAAAAACCTTAAGAGATTTGATAACACC
CCTTCCATTGGTAACTCTGAGCATGCCCCTTCCCCCCCCACACAAAAAAGAGAATCAGGT
CTCCTAGGAAAAGATACACAGGCCTGTATTGTAATATACTAGACACATACAAGGGAGTGA
ACTCTCGCCAGTGAAAGAAAACCTATCCCAAAGCAATTTTCCGCAGTAAGTATCACACGG
ATAGATTCAAACACAGAAGTGACAAGCC
■■Homology search results ■■ -
sp_hit_id P34054
Definition sp|P34054|INDA1_TRIAT Amino-acid permease inda1 OS=Trichoderma atroviride
Align length 32
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912129|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_D11.
(268 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P34054|INDA1_TRIAT Amino-acid permease inda1 OS=Trichoderma a... 29 6.4
sp|Q21179|NAS18_CAEEL Zinc metalloproteinase nas-18 OS=Caenorhab... 29 8.5

>sp|P34054|INDA1_TRIAT Amino-acid permease inda1 OS=Trichoderma
atroviride GN=inda1 PE=2 SV=1
Length = 573

Score = 29.3 bits (64), Expect = 6.4
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -1

Query: 139 VYLFLGDLILFFVWGGKGHAQSYQWKGCYQIS 44
+ LFLG +I+ ++G G+A+ W C++++
Sbjct: 182 ISLFLGVIIIINLFGALGYAEEEFWASCFKLA 213


>sp|Q21179|NAS18_CAEEL Zinc metalloproteinase nas-18
OS=Caenorhabditis elegans GN=nas-18 PE=2 SV=1
Length = 410

Score = 28.9 bits (63), Expect = 8.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -3

Query: 215 CFGIGFLSLARVHSLVCV*YITIQACVSFPRR---PDSLFCVGGEGACSELPMEGVLSNL 45
CF F + R L + +I+ Q CV+F P+ + V G+G S + M ++ +L
Sbjct: 95 CFDSSFSTEKRELMLFSMNFISSQTCVTFEENCSIPNRVQLVNGKGCSSYIGMNNIVQHL 154


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912129|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_D11.
(268 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******