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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912130
Clone id YMU001_000015_E01
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTGGAGTTGAATTTCTTCAACTTTTCTTCTCGAGAGTTGCATTTCCAGCTCATTGGATA
TGTTGTGAAGCCATCTATTTGGTTGAACTTGACTTTGGCTCCCCGTTCTCCATCTTTCTC
CCTTTGGTTGCCCGAAAGCGTCTTTTTCACCATAGGTAAGTGAATCAGCTTTCTTTTGGG
TTTTGCTTGCAAACATAAGTCATCGATAGTTACTTGAAGCTACTTGTGAAGTTTCATTTC
ATTCGGTCGTCAATTTCAGCCGTTATGCCAAAATGTCGCTTTGTGTGTTCGCAGCTAAAT
CGGTTGTTCCGACCTACTTTTTGTGATTCAAACTTGGAGATATTCTACGGTTGCATTGTC
CTTGATGTGGTTGAACTTCCTGTAAAGTTTCGTGTCGTTTCGACAACTTTTTCCTGTTCG
CCTCTTGCAGGCTCTGTTGACCTAGGGTTTTTCCAGTCGTTCTTTCTCGAGCTTTGAGTG
TTAGAAACCTATCTTCTATACTAGGGTAACCCACCTATAAGTTC
■■Homology search results ■■ -
sp_hit_id P37119
Definition sp|P37119|C71A3_SOLME Cytochrome P450 71A3 (Fragment) OS=Solanum melongena
Align length 54
Score (bit) 33.5
E-value 0.63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912130|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_E01.
         (524 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37119|C71A3_SOLME Cytochrome P450 71A3 (Fragment) OS=Solanum...    33   0.63 
sp|Q0V8G2|GABP2_BOVIN GA-binding protein subunit beta-2 OS=Bos t...    33   1.1  
sp|Q9C091|GRB1L_HUMAN GREB1-like protein OS=Homo sapiens GN=KIAA...    32   2.4  
sp|Q9FH66|C71AG_ARATH Cytochrome P450 71A16 OS=Arabidopsis thali...    31   3.1  
sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=...    31   4.1  
sp|Q55GK0|GTAE_DICDI GATA zinc finger domain-containing protein ...    31   4.1  
sp|Q1KXR1|YCF1_HELAN Putative membrane protein ycf1 OS=Helianthu...    30   5.3  
sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Sch...    30   5.3  
sp|A6NDL8|O6C68_HUMAN Olfactory receptor 6C68 OS=Homo sapiens GN...    30   7.0  
sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=...    30   9.1  
sp|Q8TAK5|GABP2_HUMAN GA-binding protein subunit beta-2 OS=Homo ...    30   9.1  
sp|P37118|C71A2_SOLME Cytochrome P450 71A2 OS=Solanum melongena ...    30   9.1  

>sp|P37119|C71A3_SOLME Cytochrome P450 71A3 (Fragment) OS=Solanum
           melongena GN=CYP71A3 PE=2 SV=1
          Length = 365

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -2

Query: 175 KKADSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRKVEE 14
           K AD L YG KD    P GE WR     Q++    LH +SN+        + EE
Sbjct: 96  KMADRLIYGSKDVSFSPHGEYWR-----QIRSITVLHLLSNKRVQSYRAAREEE 144


>sp|Q0V8G2|GABP2_BOVIN GA-binding protein subunit beta-2 OS=Bos
           taurus GN=GABPB2 PE=2 SV=2
          Length = 447

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -2

Query: 505 PSIEDRFLTLKARERTTGKTLGQQSLQEANRKKLSKRHETLQEVQ 371
           P IE+   +++  +  T + L QQ LQEANR+    RH+ L++ Q
Sbjct: 335 PRIEEMTNSVEESKEGTERELLQQRLQEANRRAQEYRHQLLKKEQ 379


>sp|Q9C091|GRB1L_HUMAN GREB1-like protein OS=Homo sapiens GN=KIAA1772
            PE=2 SV=2
          Length = 1923

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 14   FFNFSSRELHFQLIG---YVVKPSIWLNLTLAPRSPSFSLWLPESVFFTIGK*ISFLLGF 184
            F NFS  + H Q+ G   +++KP I ++ +LAP  P   +  P+S    +     FLL  
Sbjct: 1732 FNNFSLMKKHVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEHTLLAAPAQFLLEK 1791

Query: 185  ACKHKS 202
              +H S
Sbjct: 1792 FLQHAS 1797


>sp|Q9FH66|C71AG_ARATH Cytochrome P450 71A16 OS=Arabidopsis thaliana
           GN=CYP71A16 PE=2 SV=1
          Length = 497

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -2

Query: 199 LMFASKT-QKKADSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRK 23
           L FA++   K A  ++ G +D    P GE WR      V+    +H +SN++     +R+
Sbjct: 94  LKFANRPITKSAHKISNGGRDLVFAPYGEYWRN-----VKSLCTIHLLSNKMVQSSEKRR 148

Query: 22  VEEIQL 5
            EEI L
Sbjct: 149 EEEITL 154


>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo
            sapiens GN=TRIM66 PE=2 SV=3
          Length = 1214

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = -2

Query: 193  FASKTQKKADSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRKVEE 14
            FA   Q+ +DS     +     P+G  W    Q  +QP R   ++ NE   ++S R    
Sbjct: 1151 FAQPRQEDSDSEEVSSESGCSTPQGFPWPPYMQEGIQPKRRRRHMENERAKRMSFRLANS 1210

Query: 13   I 11
            I
Sbjct: 1211 I 1211


>sp|Q55GK0|GTAE_DICDI GATA zinc finger domain-containing protein 5
           OS=Dictyostelium discoideum GN=gtaE PE=4 SV=1
          Length = 952

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = -2

Query: 469 RERTTGKTLGQQSLQEANRKKLSKRHETLQEVQPHQGQCNRRISPS--LNHKK*VGTTDL 296
           +E  + K   QQ  Q+  +++  K+ +  Q+ Q  Q Q N  I+ S   N  + +GTT  
Sbjct: 708 KENNSQKQHQQQQQQQQQQQEQQKQQQEQQKQQEEQQQ-NLSINNSNQTNENEILGTTTT 766

Query: 295 AANTQSDILA*RLKLTTE*NETSQVASSNY 206
              + + I+  ++ +    N     +SSNY
Sbjct: 767 TTTSTATIITSQVPMNLSPNSDDNQSSSNY 796


>sp|Q1KXR1|YCF1_HELAN Putative membrane protein ycf1 OS=Helianthus
           annuus GN=ycf1 PE=3 SV=1
          Length = 1705

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = -2

Query: 190 ASKTQKKADS---LTYGEKDAFGQPKGERWRTG-SQSQVQPNRWLHNISNELEMQLSRRK 23
           + K ++K DS   L +   +    PK E+   G ++   +P RW + + NELE    +R+
Sbjct: 512 SEKKKRKIDSNNGLKFSLNEILTNPKREKKYIGINEIGKKPPRWSYKLINELEQYFKKRR 571

Query: 22  VEE 14
            E+
Sbjct: 572 KEQ 574


>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1
           OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3
          Length = 690

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 26  SSRELHFQLIGYVVKPSIWLNLTLAPRSPSFSLWLP 133
           SS+    + + Y V PS   N T  P SP+ ++WLP
Sbjct: 240 SSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLP 275


>sp|A6NDL8|O6C68_HUMAN Olfactory receptor 6C68 OS=Homo sapiens
           GN=OR6C68 PE=2 SV=2
          Length = 312

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = +1

Query: 181 FCLQT*VIDSYLKLLVKFHFIRSSISAVMPKCRFVCSQLNRL----------FRPTFCDS 330
           F L T   D Y+ +    H++ + +S  + K   +C  +  L          F   FCDS
Sbjct: 111 FLLATMSYDRYVAICKPLHYM-AIMSNKVCKTMVICCWMAALMIILPPLSLGFHLEFCDS 169

Query: 331 NLEIFYGCIVLDVVELP 381
           N+   +GC  L ++++P
Sbjct: 170 NVINHFGCDALPILKIP 186


>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus
            musculus GN=Trim66 PE=1 SV=2
          Length = 1242

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = -2

Query: 193  FASKTQKKADSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRKVEE 14
            FA   Q+ +DS     +     P+G  W    Q  +QP R   ++ NE   ++S R    
Sbjct: 1179 FAQPQQEDSDSEDVSGESGCSTPQGFPWPPYMQEGIQPKRRRRHMENEKTKRVSFRLANS 1238

Query: 13   I 11
            I
Sbjct: 1239 I 1239
tr_hit_id B7BYC8
Definition tr|B7BYC8|B7BYC8_9FIRM Putative uncharacterized protein OS=Roseburia intestinalis L1-82
Align length 149
Score (bit) 36.2
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912130|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_E01.
         (524 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7BYC8|B7BYC8_9FIRM Putative uncharacterized protein OS=Roseb...    36   1.0  
tr|B3DLJ0|B3DLJ0_XENTR LOC100170499 protein OS=Xenopus tropicali...    34   5.1  
tr|Q6ZD84|Q6ZD84_ORYSJ Os08g0105700 protein OS=Oryza sativa subs...    34   5.1  
tr|A3BNV5|A3BNV5_ORYSJ Putative uncharacterized protein OS=Oryza...    34   5.1  
tr|A2YQF1|A2YQF1_ORYSI Putative uncharacterized protein OS=Oryza...    34   5.1  
tr|A6CPF7|A6CPF7_9BACI Putative uncharacterized protein OS=Bacil...    33   6.6  
tr|B4LG15|B4LG15_DROVI GJ11544 OS=Drosophila virilis GN=GJ11544 ...    33   6.6  

>tr|B7BYC8|B7BYC8_9FIRM Putative uncharacterized protein
           OS=Roseburia intestinalis L1-82 GN=ROSINTL182_01764 PE=4
           SV=1
          Length = 377

 Score = 36.2 bits (82), Expect = 1.0
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
 Frame = +1

Query: 28  FSRVAFPAHWICCEAIYLVELDFGSPFSIFLPLVARKRLFHHR*VNQLSFGFCL---QT* 198
           FS +A  A WI C A  +  L  GS   IF   +  K       V Q  +GF +    T 
Sbjct: 105 FSVIAQIAVWIRCVAAVI--LSGGSLIGIFD--IGEKTKLDSGYVEQHVYGFAMGEPNTA 160

Query: 199 VIDSYLKLLVKFHFIRSSISAVMPKCRFVCSQLNRLFRPTFCDSNLEIFYGCIVLDVVEL 378
            +  +L LL+  ++    ++ +   C          ++ TFC + + +F+ C VL + + 
Sbjct: 161 FLTVFLALLLVLYYNYEKLNVLW--CGVTSLIALVFYKMTFCRTGVLVFFFCWVLILFDK 218

Query: 379 PVKFRVVSTTFSCSPLAGSVDLGFFQSFF 465
            VK + + +   CS   G+    F   F+
Sbjct: 219 VVKSKKIKSVLVCSVPVGAAFSLFTTLFY 247


>tr|B3DLJ0|B3DLJ0_XENTR LOC100170499 protein OS=Xenopus tropicalis
            GN=kiaa1772 PE=2 SV=1
          Length = 1970

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 14   FFNFSSRELHFQLIG---YVVKPSIWLNLTLAPRSPSFSLWLPESVFFTIGK*ISFLLGF 184
            F NFS  + H Q+ G   +++KP I +  +LAP SP   +  P+S    +     FLL  
Sbjct: 1778 FNNFSLMKKHIQVGGHKDFIIKPKIMITESLAPISPMQYVCAPDSEQTLLAAPAQFLLEK 1837

Query: 185  ACKHKS 202
              +H S
Sbjct: 1838 FLQHSS 1843


>tr|Q6ZD84|Q6ZD84_ORYSJ Os08g0105700 protein OS=Oryza sativa subsp.
           japonica GN=P0450B04.1 PE=2 SV=1
          Length = 390

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 196 MFASKTQKKA-DSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRKV 20
           +FAS+T     D L YG  D    P GE WR     QV+     H ++N+     SR + 
Sbjct: 132 VFASRTYSAVTDILFYGSSDVAFSPYGEYWR-----QVKKIATTHLLTNKKVRSYSRARQ 186

Query: 19  EEIQL 5
           +E++L
Sbjct: 187 QEVRL 191


>tr|A3BNV5|A3BNV5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_024727 PE=3 SV=1
          Length = 610

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 196 MFASKTQKKA-DSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRKV 20
           +FAS+T     D L YG  D    P GE WR     QV+     H ++N+     SR + 
Sbjct: 100 VFASRTYSAVTDILFYGSSDVAFSPYGEYWR-----QVKKIATTHLLTNKKVRSYSRARQ 154

Query: 19  EEIQL 5
           +E++L
Sbjct: 155 QEVRL 159


>tr|A2YQF1|A2YQF1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27516 PE=3 SV=1
          Length = 508

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 196 MFASKTQKKA-DSLTYGEKDAFGQPKGERWRTGSQSQVQPNRWLHNISNELEMQLSRRKV 20
           +FAS+T     D L YG  D    P GE WR     QV+     H ++N+     SR + 
Sbjct: 100 VFASRTYSAVTDILFYGSSDVAFSPYGEYWR-----QVKKIATTHLLTNKKVRSYSRARQ 154

Query: 19  EEIQL 5
           +E++L
Sbjct: 155 QEVRL 159


>tr|A6CPF7|A6CPF7_9BACI Putative uncharacterized protein OS=Bacillus
           sp. SG-1 GN=BSG1_00145 PE=4 SV=1
          Length = 106

 Score = 33.5 bits (75), Expect = 6.6
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +1

Query: 295 LNRLFRPTFCDSNLEIFYGCIVLDVVELPVKFRVVSTTFSCSPLAGSVDLGFFQSF 462
           L + FRP FC +  E+  G I LD    PV F++V+  F   P+  S+ L    SF
Sbjct: 42  LGQTFRPIFCGTLAEVGRGHITLD----PVIFKIVNAPFYEFPMPISIPLEKIVSF 93


>tr|B4LG15|B4LG15_DROVI GJ11544 OS=Drosophila virilis GN=GJ11544
           PE=4 SV=1
          Length = 551

 Score = 33.5 bits (75), Expect = 6.6
 Identities = 32/128 (25%), Positives = 53/128 (41%)
 Frame = -2

Query: 478 LKARERTTGKTLGQQSLQEANRKKLSKRHETLQEVQPHQGQCNRRISPSLNHKK*VGTTD 299
           + A + T     GQ+ LQ+ N+K+  K+ +  Q+ Q   G  N    P+ N K     +D
Sbjct: 1   MNASKETKSTAKGQKKLQKTNKKQQQKQQQQQQQQQAINGSKNGISKPATNAK--TKPSD 58

Query: 298 LAANTQSDILA*RLKLTTE*NETSQVASSNYR*LMFASKTQKKADSLTYGEKDAFGQPKG 119
              N +S+        T   N  + V ++N    M  +       ++T   K+   Q + 
Sbjct: 59  TKPNNRSN----NNTTTNNNNNNNMVQNNNNSQSMIGTTPATTTPNITQKFKE---QYEA 111

Query: 118 ERWRTGSQ 95
           ER  T SQ
Sbjct: 112 ERRATMSQ 119