BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912136|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_E07.
         (518 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2KV10|ANMK_BORA1 Anhydro-N-acetylmuramic acid kinase OS=Bord...    31   3.0  
sp|P08346|VE3_BPV4 Probable protein E3 OS=Bovine papillomavirus ...    31   4.0  
sp|P07526|NXL3_OPHHA Long neurotoxin 3 OS=Ophiophagus hannah PE=...    30   5.2  
sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella nid...    30   6.8  
sp|P31821|GAG_FIVT2 Gag polyprotein OS=Feline immunodeficiency v...    30   8.8  

>sp|Q2KV10|ANMK_BORA1 Anhydro-N-acetylmuramic acid kinase
           OS=Bordetella avium (strain 197N) GN=anmK PE=3 SV=1
          Length = 372

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +2

Query: 143 H*ELGASG---SPRDSYSPHVEYVSNKDGRKSGIHQVQDVLMCGGTAKHSA 286
           H  L +SG   SP+D  +  VE  +    R      +QD+L+CGG A++ A
Sbjct: 257 HKHLDSSGLRLSPQDVQATLVELTAQTVARAIASEPIQDLLVCGGGARNPA 307


>sp|P08346|VE3_BPV4 Probable protein E3 OS=Bovine papillomavirus
           type 4 GN=E3 PE=4 SV=1
          Length = 98

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 193 CGICLK*GWPKKRHPSSTRCTYVWRNCK 276
           C  CL   +  KR    +RCTYVW+ C+
Sbjct: 56  CTQCLPPEYQNKRLRMQSRCTYVWKACR 83


>sp|P07526|NXL3_OPHHA Long neurotoxin 3 OS=Ophiophagus hannah PE=1
           SV=1
          Length = 73

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 396 GFNLAHVVTWDTTWCRNSRSSV*PVWSKIMRVPLTLVAECFAVPPHISTSC 244
           G +L +  TW   WC            +  RV LT  A C  VPP +S  C
Sbjct: 17  GQDLCYTETWCVAWCT----------VRGKRVSLTCAAICPIVPPKVSIKC 57


>sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella
           nidulans GN=mch1 PE=3 SV=2
          Length = 615

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
 Frame = -2

Query: 448 AKCPIYLSVLCCYEPTCRVQFGTCCHMGYDMV*ELKEFGLASVEQDNEGPSHSCRGVFCS 269
           A C +YL+ +     TC   FG   H G  +   +  FGL+ + Q   G    C  +  S
Sbjct: 195 ATCSMYLAAVT----TCAKNFGRGKHKGIILAVPIAAFGLSGMWQSQVGTYFLCERLKDS 250

Query: 268 S----STHKYILYL 239
           +      +KY L+L
Sbjct: 251 NCGDVDVYKYFLFL 264


>sp|P31821|GAG_FIVT2 Gag polyprotein OS=Feline immunodeficiency
           virus (isolate TM2) GN=gag PE=3 SV=1
          Length = 449

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 207 QIRMAEKAASIKYKMYLCVEELQNTPRQE*EGPSLSCSTLAKPNSLS 347
           ++R  ++  S  YKM L  E L      + +GP L C    KP  L+
Sbjct: 341 KLRACQEVGSPGYKMQLLAEALTRVQTVQTKGPRLVCFNCKKPGHLA 387

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912136|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_E07.
         (518 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0P1F5|B0P1F5_9CLOT Putative uncharacterized protein OS=Clost...    34   5.0  
tr|A4T8I2|A4T8I2_MYCGI Putative uncharacterized protein OS=Mycob...    33   8.5  

>tr|B0P1F5|B0P1F5_9CLOT Putative uncharacterized protein
           OS=Clostridium sp. SS2/1 GN=CLOSS21_01542 PE=4 SV=1
          Length = 102

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +2

Query: 20  RNKAVLSTRQFLSIEIVPDTVCSKCSNKRMRPAHRDFVATH 142
           R K V S +QFL I  +PD +C   +NK++  ++ D V+ H
Sbjct: 47  RTKFVFSRKQFLGIRPIPDVICG--TNKKLIDSNFDVVSDH 85


>tr|A4T8I2|A4T8I2_MYCGI Putative uncharacterized protein
           OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_2341
           PE=4 SV=1
          Length = 124

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 483 PCQGHVGTKYFGPSVQSIFLSYVVTNLLVGFNLAHVVTWD-TTWCRNSRSSV*PVWSKIM 307
           P Q  +G K FGP    +F+++++  L+VG      V WD   W      S+ P+ S I 
Sbjct: 39  PPQTEIGVKIFGPIHGGVFVAFLIAALMVGV----AVKWDVAAWLLALLGSIVPLGSVIF 94

Query: 306 RV 301
            +
Sbjct: 95  LI 96