BP912146 |
Clone id |
YMU001_000015_F05 |
Library |
YMU01 |
Length |
531 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_F05. |
Accession |
BP912146 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTATAATCCAGCTTTCAAAAACATGATACGCATTTAATGAGATTGTGGCATACATGATCT TCATGCTTAAACAAGTGCTGTGCATAATGTCAAAAAACACATTAGTTTATCGGTTGTATA GAGGACAACGTATCTACGCCAGTGCATTGAAAGGAAGAGACAATCGACTCAGACCCAAAC TCTAGGGAAACATGTACTGGCACCCCTGTGAACCTGTTTGTAGGACTACAAAAATGTCAA AGAATCAAATGCTCTTTATCATTGTACAAATCCAGTACAAGAACACTTCCCATTTTCAAA GCGATGACAATAGGCAGTATCTGTGACAACAATTGTCCGCACCTCTATTTTTGATATAAT AGATATCACAACATGGCAATCACCACATATCCCCATATCCTTAGTAATATGAATAGTGTC TCGTTGAGGTGCATTGGTCAGAGCACATGCAAGGGCTAACATCTCAGAATGGCGACAAAG CAAATGACTCTTCGCAGCAGACAAAATGTTCTGGGACATCCGATGTAAACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O81767 |
Definition |
sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana |
Align length |
79 |
Score (bit) |
79.7 |
E-value |
8.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2QU89 |
Definition |
tr|Q2QU89|Q2QU89_ORYSJ Os12g0270200 protein OS=Oryza sativa subsp. japonica |
Align length |
75 |
Score (bit) |
81.6 |
E-value |
2.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912146|Adiantum capillus-veneris mRNA, clone: YMU001_000015_F05. (531 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2QU89|Q2QU89_ORYSJ Os12g0270200 protein OS=Oryza sativa subs... 82 2e-14 tr|B8YEK4|B8YEK4_ORYSJ Pentatricopeptide repeat protein OS=Oryza... 82 2e-14 tr|B8YEK3|B8YEK3_ORYSJ Pentatricopeptide repeat protein OS=Oryza... 82 2e-14 tr|B8AZL5|B8AZL5_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A3B1G2|A3B1G2_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A7QRN2|A7QRN2_VITVI Chromosome undetermined scaffold_151, who... 79 2e-13 tr|A7QIJ2|A7QIJ2_VITVI Chromosome chr9 scaffold_104, whole genom... 78 3e-13 tr|B2ZAT1|B2ZAT1_9ROSI Putative pentatricopeptide repeat protein... 76 9e-13 tr|A7PIZ1|A7PIZ1_VITVI Chromosome chr13 scaffold_17, whole genom... 76 1e-12 tr|A5ADX7|A5ADX7_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|Q6DXS0|Q6DXS0_GOSHI Putative pentatricopeptide repeat protein... 75 2e-12 tr|B2ZAU5|B2ZAU5_GOSAR Putative pentatricopeptide OS=Gossypium a... 75 2e-12 tr|B2ZAR9|B2ZAR9_GOSRA Putative pentatricopeptide repeat protein... 75 2e-12 tr|A7P5R6|A7P5R6_VITVI Chromosome chr4 scaffold_6, whole genome ... 75 2e-12 tr|A7NVM6|A7NVM6_VITVI Chromosome chr18 scaffold_1, whole genome... 75 2e-12 tr|Q8LI18|Q8LI18_ORYSJ Selenium-binding protein-like OS=Oryza sa... 75 2e-12 tr|Q10K51|Q10K51_ORYSJ Pentatricopeptide, putative (Putative unc... 75 2e-12 tr|A7P2L5|A7P2L5_VITVI Chromosome chr1 scaffold_5, whole genome ... 75 2e-12 tr|Q8H8N2|Q8H8N2_ORYSJ Os03g0775400 protein OS=Oryza sativa subs... 75 3e-12 tr|Q6DXT4|Q6DXT4_GOSHI Putative pentatricopeptide repeat protein... 75 3e-12 tr|Q0IR95|Q0IR95_ORYSJ Os11g0661000 protein OS=Oryza sativa subs... 75 3e-12 tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genom... 75 3e-12 tr|A7PM23|A7PM23_VITVI Chromosome chr14 scaffold_21, whole genom... 75 3e-12 tr|A7NTL0|A7NTL0_VITVI Chromosome chr18 scaffold_1, whole genome... 75 3e-12 tr|A3AN62|A3AN62_ORYSJ Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|A2XMF9|A2XMF9_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|A7R1A1|A7R1A1_VITVI Chromosome undetermined scaffold_342, who... 74 5e-12 tr|A7PEA5|A7PEA5_VITVI Chromosome chr11 scaffold_13, whole genom... 74 5e-12 tr|A5C1E4|A5C1E4_VITVI Putative uncharacterized protein (Fragmen... 74 5e-12 tr|A7PEB0|A7PEB0_VITVI Chromosome chr11 scaffold_13, whole genom... 74 6e-12
>tr|Q2QU89|Q2QU89_ORYSJ Os12g0270200 protein OS=Oryza sativa subsp. japonica GN=Os12g0270200 PE=4 SV=1 Length = 794
Score = 81.6 bits (200), Expect = 2e-14 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K + LC HSE LA+A L P +T+ + K++ ICGDCHVV +ISK R IV+ D A Sbjct: 512 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 571
Query: 312 YCHRFENGKCSCTGF 268 HRFE+G+CSC + Sbjct: 572 RFHRFEDGQCSCRDY 586
>tr|B8YEK4|B8YEK4_ORYSJ Pentatricopeptide repeat protein OS=Oryza sativa subsp. japonica GN=OGR1 PE=4 SV=1 Length = 587
Score = 81.6 bits (200), Expect = 2e-14 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K + LC HSE LA+A L P +T+ + K++ ICGDCHVV +ISK R IV+ D A Sbjct: 512 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 571
Query: 312 YCHRFENGKCSCTGF 268 HRFE+G+CSC + Sbjct: 572 RFHRFEDGQCSCRDY 586
>tr|B8YEK3|B8YEK3_ORYSJ Pentatricopeptide repeat protein OS=Oryza sativa subsp. japonica GN=OGR1 PE=4 SV=1 Length = 589
Score = 81.6 bits (200), Expect = 2e-14 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K + LC HSE LA+A L P +T+ + K++ ICGDCHVV +ISK R IV+ D A Sbjct: 514 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 573
Query: 312 YCHRFENGKCSCTGF 268 HRFE+G+CSC + Sbjct: 574 RFHRFEDGQCSCRDY 588
>tr|B8AZL5|B8AZL5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19008 PE=4 SV=1 Length = 580
Score = 81.6 bits (200), Expect = 2e-14 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K + LC HSE LA+A L P +T+ + K++ ICGDCHVV +ISK R IV+ D A Sbjct: 505 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 564
Query: 312 YCHRFENGKCSCTGF 268 HRFE+G+CSC + Sbjct: 565 RFHRFEDGQCSCRDY 579
>tr|A3B1G2|A3B1G2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016884 PE=4 SV=1 Length = 623
Score = 81.6 bits (200), Expect = 2e-14 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K + LC HSE LA+A L P +T+ + K++ ICGDCHVV +ISK R IV+ D A Sbjct: 341 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 400
Query: 312 YCHRFENGKCSCTGF 268 HRFE+G+CSC + Sbjct: 401 RFHRFEDGQCSCRDY 415
>tr|A7QRN2|A7QRN2_VITVI Chromosome undetermined scaffold_151, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005426001 PE=4 SV=1 Length = 570
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/75 (48%), Positives = 49/75 (65%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K + LC HSE LA+A L + + I + K++ ICGDCHVVI +ISKI + I+V D A Sbjct: 495 KENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISKIYDQEIIVRDRA 554
Query: 312 YCHRFENGKCSCTGF 268 HRF++G CSC + Sbjct: 555 RFHRFKDGSCSCRDY 569
>tr|A7QIJ2|A7QIJ2_VITVI Chromosome chr9 scaffold_104, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000282001 PE=4 SV=1 Length = 814
Score = 77.8 bits (190), Expect = 3e-13 Identities = 36/79 (45%), Positives = 48/79 (60%) Frame = -1
Query: 513 QNILSAAKSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRT 334 ++I + L +HSE LAL+ L + P++ TI + K++ ICGDCH ISKI R Sbjct: 732 KDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRR 791
Query: 333 IVVTDTAYCHRFENGKCSC 277 I+ DT H FENGKCSC Sbjct: 792 IIARDTNRFHHFENGKCSC 810
>tr|B2ZAT1|B2ZAT1_9ROSI Putative pentatricopeptide repeat protein OS=Gossypioides kirkii PE=4 SV=1 Length = 805
Score = 76.3 bits (186), Expect = 9e-13 Identities = 35/75 (46%), Positives = 46/75 (61%) Frame = -1
Query: 492 KSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRTIVVTDTA 313 K LC HSE LA+A L P R T+ +TK++ +CGDCH + +SK R IV+ D+ Sbjct: 730 KEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSN 789
Query: 312 YCHRFENGKCSCTGF 268 H F+NG CSC GF Sbjct: 790 RFHHFKNGYCSCRGF 804
>tr|A7PIZ1|A7PIZ1_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018529001 PE=4 SV=1 Length = 1005
Score = 75.9 bits (185), Expect = 1e-12 Identities = 36/82 (43%), Positives = 44/82 (53%) Frame = -1
Query: 513 QNILSAAKSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRT 334 QN+ K L HSE LA+ AL N P TI I K++ +C DCH ISKI R Sbjct: 923 QNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRR 982
Query: 333 IVVTDTAYCHRFENGKCSCTGF 268 I+V D H FE+G CSC + Sbjct: 983 IIVRDATRFHHFEDGICSCNDY 1004
>tr|A5ADX7|A5ADX7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010010 PE=4 SV=1 Length = 1005
Score = 75.9 bits (185), Expect = 1e-12 Identities = 36/82 (43%), Positives = 44/82 (53%) Frame = -1
Query: 513 QNILSAAKSHLLCRHSEMLALACALTNAPQRDTIHITKDMGICGDCHVVISIISKIEVRT 334 QN+ K L HSE LA+ AL N P TI I K++ +C DCH ISKI R Sbjct: 923 QNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRR 982
Query: 333 IVVTDTAYCHRFENGKCSCTGF 268 I+V D H FE+G CSC + Sbjct: 983 IIVRDATRFHHFEDGICSCNDY 1004
|