BP912147
Clone id YMU001_000015_F06
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCGTAAGAGAGGCATACGATGCTTAGATTTCCGTATATGTTACATTGGTATCAGAGCGGT
AACGATTTGGTTGTTTCCATTGTTTATGAGTGCTTTAAGAGATAAGTTGGTTTGACTTTC
AGCATCAATTGCCTGAGCTTTGGGTGATTTGTGTCCTGTGCTACCATTGCTATGCAGTTT
GAAGCCATGATTAAGTTTGAGAATATTGCAAGTTGTGTACATTGAACATTTCTGATTGCA
TGCTGAAGAGGGAATTGGAACACGCTGTGTATGCAAGAAAGCTTGGTATATGGGGCAGTG
GTTGCCATCTCATGCGGGTGATGCAGCAAGGCAGGTGAGCGATGGAATGAAGTAGAATGG
TGACGTGATGTAACATCAACTTCGCCTCTCTTAGCAAGCGTTGCTACTGCTTGCCTTCGC
AAAGAGAAGCATCGCAGGTATCCAGCCCTCTCTTTTTGTATAGGGCCTTTCGGCTCATGC
ATAGGGTGTAGAGAGTGTCAGGTCATAGCTGGCCGTGGAGTGGCTTA
■■Homology search results ■■ -
sp_hit_id A1VCU3
Definition sp|A1VCU3|SYI_DESVV Isoleucyl-tRNA synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Align length 57
Score (bit) 32.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912147|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_F06.
(527 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1VCU3|SYI_DESVV Isoleucyl-tRNA synthetase OS=Desulfovibrio v... 32 1.9
sp|Q72AR5|SYI_DESVH Isoleucyl-tRNA synthetase OS=Desulfovibrio v... 32 1.9
sp|Q6F4F5|C724B_ORYSJ Cytochrome P450 724B1 OS=Oryza sativa subs... 31 4.1

>sp|A1VCU3|SYI_DESVV Isoleucyl-tRNA synthetase OS=Desulfovibrio
vulgaris subsp. vulgaris (strain DP4) GN=ileS PE=3 SV=1
Length = 938

Score = 32.0 bits (71), Expect = 1.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1

Query: 247 RGNWNTLCMQESLVYGA-VVAISCG*CSKAGERWNEVEW*RDVTSTSPLLASVATAC 414
R +W C+ ++G +VA+ C C GE WN+ +W RD+ A AT C
Sbjct: 457 RPDW---CISRQRMWGVPIVALLCEDC---GEAWNDADWMRDIAER---FAKHATGC 504


>sp|Q72AR5|SYI_DESVH Isoleucyl-tRNA synthetase OS=Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB
8303) GN=ileS PE=3 SV=1
Length = 938

Score = 32.0 bits (71), Expect = 1.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1

Query: 247 RGNWNTLCMQESLVYGA-VVAISCG*CSKAGERWNEVEW*RDVTSTSPLLASVATAC 414
R +W C+ ++G +VA+ C C GE WN+ +W RD+ A AT C
Sbjct: 457 RPDW---CISRQRMWGVPIVALLCEDC---GEAWNDADWMRDIAER---FAKHATGC 504


>sp|Q6F4F5|C724B_ORYSJ Cytochrome P450 724B1 OS=Oryza sativa subsp.
japonica GN=CYP724B1 PE=1 SV=1
Length = 480

Score = 30.8 bits (68), Expect = 4.1
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = -1

Query: 287 TKLSCIHSVFQFPLQHAIRNVQCTQLAIFSNLIMASNCIAMVAQDTNHPKLRQLML---- 120
T +SC + F LQ+ R QC+ ++ S+ + ++ +D H +LR L L
Sbjct: 84 TIVSCDQELNHFILQNEERLFQCSYPRPIHGILGKSSMLVVLGED--HKRLRNLALALVT 141

Query: 119 --KVKPTYL 99
K+KP+YL
Sbjct: 142 STKLKPSYL 150


tr_hit_id Q6IJ39
Definition tr|Q6IJ39|Q6IJ39_DROME HDC16025 OS=Drosophila melanogaster
Align length 61
Score (bit) 34.7
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912147|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_F06.
(527 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6IJ39|Q6IJ39_DROME HDC16025 OS=Drosophila melanogaster GN=HD... 35 3.0
tr|Q0CZL7|Q0CZL7_ASPTN Putative uncharacterized protein OS=Asper... 33 6.7

>tr|Q6IJ39|Q6IJ39_DROME HDC16025 OS=Drosophila melanogaster
GN=HDC16025 PE=4 SV=1
Length = 196

Score = 34.7 bits (78), Expect = 3.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3

Query: 273 HTQRVPIPSSACNQKCSMYTTCNILKLNHGFKLHSNGSTGHKSPKAQAIDAESQTNLSLK 94
H R P ACN +C+ T + L ++ G + +G TG S A+A + SQ +L
Sbjct: 116 HAFRPAAPGLACNFRCAGGTHISWLPVDSGLRTQDSGWTGDGSVTAEAQEQSSQIRTALS 175

Query: 93 A 91
+
Sbjct: 176 S 176


>tr|Q0CZL7|Q0CZL7_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_00867
PE=4 SV=1
Length = 1073

Score = 33.5 bits (75), Expect = 6.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3

Query: 345 PSLTCLAASPA*DGNHCPIYQAFLHTQRVPIPSSACNQK 229
P+LT A SPA N PIY L T +P P ++ N +
Sbjct: 17 PALTSAAPSPAQQNNRSPIYPDLLGTPPIPPPRTSSNHR 55