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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912154
Clone id YMU001_000015_G02
Library
Length 231
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGTAGCTTCAATCCATTATTCAAAAACCCAACCAATTTCCAGCTCCTCTGCTCTCTCAAC
CTCTTTTCTTTTCCAATAAGTGGACAGGGGCACGCCAGTAATTTCTTTGGTATACAAGAC
AATCGTATCCATACAAAATTTTACCAATAATGTGAGTGCATAATGCCAATATAGCTCAAG
GCAGTAAGGCACCATAATTTACACATAAAGCTCCTACATTGCACAAGTATG
■■Homology search results ■■ -
sp_hit_id O42654
Definition sp|O42654|MU134_SCHPO Meiotically up-regulated gene 134 protein OS=Schizosaccharomyces pombe
Align length 41
Score (bit) 29.3
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912154|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G02.
         (231 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O42654|MU134_SCHPO Meiotically up-regulated gene 134 protein ...    29   6.5  

>sp|O42654|MU134_SCHPO Meiotically up-regulated gene 134 protein
           OS=Schizosaccharomyces pombe GN=mug134 PE=1 SV=1
          Length = 432

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 1   CSFNPLFKNPTNFQLLCSLNLFSFPISGQGHASNFFGIQDN 123
           C+   LF NPT    L   NL +F  +G   +SNF   +DN
Sbjct: 363 CNMKKLFNNPTGLHSL--PNLPNFSEAGSAKSSNFCSSKDN 401
tr_hit_id B0WLH5
Definition tr|B0WLH5|B0WLH5_CULQU Frizzled OS=Culex quinquefasciatus
Align length 55
Score (bit) 32.7
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912154|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G02.
         (231 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0WLH5|B0WLH5_CULQU Frizzled OS=Culex quinquefasciatus GN=Cpi...    33   9.3  

>tr|B0WLH5|B0WLH5_CULQU Frizzled OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ007677 PE=4 SV=1
          Length = 200

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = -2

Query: 209 FMCKLWCLTALSYIGIMHSHYW*NF-----VWIRLSCIPKKLLACPCPLIGKEKR 60
           F   L+ L AL Y+G +   Y+ NF      W R  C   K+ + PCP IGK ++
Sbjct: 84  FFSGLFILPALGYLGCLFYEYY-NFDDWMIQWNRQMC---KIFSIPCPAIGKHQQ 134