BP912155
Clone id YMU001_000015_G03
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGCAAAGCAATAATCTCTTCACGAAAATACAATGTTGTATACATGATGATAGGCACCAAA
CATGAGAGGAGACATGGAATTCCATGCCCTTTCCAAAGGAACAACTCTCTTCAATCATGG
TGCTACTAAAGCTACCTAGCTGAGACAGGCGTAAAGAAGGCCAATGAGAGATGGCTATTG
GCAATCTTCTGTACTCAATACAAGAAAAGATGCGAGAGAAAAAATATCAATGCATGTACC
GTCCCATAGAATGCGCATTCAGAGCTGCCACTCAAGATACTCATCAAGGTCTCTGTTGCT
AGCATACTCCATCAAAGAGTTGGCTCTTAAGTCTCTGTCGTGCCTCCAAAGGTAATTTAA
CCCTACCAACAGCTCCACAATAGCTGCCTCTGCCTTGGCTTGATCTGCAAAATAAAGGGT
CTGCAACAGTAGAACATTGGTTCTTGGAAGAACCTGCTGCTGCTCAAAGTTATGCTCTGA
TTGCCATCGAATCATATTGTGCGCCAATGGAGCTAGCCACCCCAGAACTCTCTCTAACGT
TT
■■Homology search results ■■ -
sp_hit_id Q96JI7
Definition sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens
Align length 46
Score (bit) 29.6
E-value 9.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912155|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G03.
(542 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=2 30 9.9

>sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=2
Length = 2443

Score = 29.6 bits (65), Expect = 9.9
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2

Query: 154 LRLSQLGS-FSSTMIEESCSFGKGMEFHVSSHVWCLSSCIQHCIFV 20
LRLS++G T+ ++ +G +FH ++CL +QH ++V
Sbjct: 962 LRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYV 1007


tr_hit_id A9T360
Definition tr|A9T360|A9T360_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 93
Score (bit) 139.0
E-value 1.0e-31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912155|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G03.
(542 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T360|A9T360_PHYPA Predicted protein OS=Physcomitrella paten... 139 1e-31
tr|A7QBH5|A7QBH5_VITVI Chromosome chr13 scaffold_74, whole genom... 124 3e-27
tr|A5BLA8|A5BLA8_VITVI Putative uncharacterized protein OS=Vitis... 124 3e-27
tr|A7NX45|A7NX45_VITVI Chromosome chr5 scaffold_2, whole genome ... 122 1e-26
tr|A5C6D9|A5C6D9_VITVI Putative uncharacterized protein OS=Vitis... 122 1e-26
tr|Q5H9X6|Q5H9X6_ORYSA P0650D04.6 protein OS=Oryza sativa GN=P06... 120 4e-26
tr|Q0JF28|Q0JF28_ORYSJ Os04g0169500 protein OS=Oryza sativa subs... 120 4e-26
tr|A2XQC0|A2XQC0_ORYSI Putative uncharacterized protein OS=Oryza... 120 4e-26
tr|A9RSB7|A9RSB7_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 4e-25
tr|Q9LTD4|Q9LTD4_ARATH Similarity to unknown protein OS=Arabidop... 115 1e-24
tr|Q0WVR1|Q0WVR1_ARATH Putative uncharacterized protein At3g2316... 115 1e-24
tr|A2ZI19|A2ZI19_ORYSI Putative uncharacterized protein OS=Oryza... 114 4e-24
tr|A7QGU2|A7QGU2_VITVI Chromosome chr16 scaffold_94, whole genom... 113 6e-24
tr|Q2QXR0|Q2QXR0_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 112 1e-23
tr|Q0IQ45|Q0IQ45_ORYSJ Os12g0146500 protein OS=Oryza sativa subs... 112 1e-23
tr|A3CEX4|A3CEX4_ORYSJ Putative uncharacterized protein OS=Oryza... 112 1e-23
tr|Q2TM93|Q2TM93_NICSY Putative uncharacterized protein (Fragmen... 111 2e-23
tr|A7PPL3|A7PPL3_VITVI Chromosome chr8 scaffold_23, whole genome... 109 1e-22
tr|A5BEF8|A5BEF8_VITVI Putative uncharacterized protein OS=Vitis... 107 5e-22
tr|Q9LZ71|Q9LZ71_ARATH Putative uncharacterized protein T32M21_1... 105 2e-21
tr|Q9LTD7|Q9LTD7_ARATH Similarity to unknown protein OS=Arabidop... 97 4e-19
tr|Q84K32|Q84K32_ARATH Putative uncharacterized protein At5g5167... 97 4e-19
tr|Q1SN23|Q1SN23_MEDTR Putative uncharacterized protein OS=Medic... 94 5e-18
tr|A9SJR7|A9SJR7_PHYPA Predicted protein OS=Physcomitrella paten... 87 7e-16
tr|B6TYC0|B6TYC0_MAIZE Putative uncharacterized protein OS=Zea m... 84 6e-15
tr|B4FP64|B4FP64_MAIZE Putative uncharacterized protein OS=Zea m... 84 6e-15
tr|A7PNR6|A7PNR6_VITVI Chromosome chr8 scaffold_23, whole genome... 75 2e-12
tr|Q84M75|Q84M75_ORYSJ Putative uncharacterized protein OSJNBa00... 74 6e-12
tr|Q10AB4|Q10AB4_ORYSJ Os03g0858600 protein OS=Oryza sativa subs... 74 6e-12
tr|A2XPA7|A2XPA7_ORYSI Putative uncharacterized protein OS=Oryza... 73 8e-12

>tr|A9T360|A9T360_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_191194 PE=4 SV=1
Length = 521

Score = 139 bits (349), Expect = 1e-31
Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 2/93 (2%)
Frame = -3

Query: 537 LERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVGL 358
LER+L WLAPLAHNMIRWQSEHNFEQQQV+ RTN LLLQTLYFAD K EA I ELLVGL
Sbjct: 428 LERILSWLAPLAHNMIRWQSEHNFEQQQVVSRTNCLLLQTLYFADLTKTEAVITELLVGL 487

Query: 357 NYLWRHDRDLRANSLM--EYASNRDLDEYLEWQ 265
NY+ H+++L+ N++M EYA N+D DEYL WQ
Sbjct: 488 NYICGHEQELKQNTVMMEEYALNKDPDEYLGWQ 520


>tr|A7QBH5|A7QBH5_VITVI Chromosome chr13 scaffold_74, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034973001
PE=4 SV=1
Length = 602

Score = 124 bits (311), Expect = 3e-27
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = -3

Query: 528 VLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVGLNYL 349
+L WLAPLAHNMIRWQSE +FEQQ ++ RTNVLL+QTLYFADQ K EA I ELLVGLNY+
Sbjct: 514 ILEWLAPLAHNMIRWQSERSFEQQNLVSRTNVLLVQTLYFADQEKTEAIITELLVGLNYI 573

Query: 348 WRHDRDLRANSLMEYASNRDLDEYLE 271
WR R+L A +L+E AS++ +EYL+
Sbjct: 574 WRFGRELNAKALLECASSKIFEEYLD 599


>tr|A5BLA8|A5BLA8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_002020 PE=4 SV=1
Length = 357

Score = 124 bits (311), Expect = 3e-27
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = -3

Query: 528 VLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVGLNYL 349
+L WLAPLAHNMIRWQSE +FEQQ ++ RTNVLL+QTLYFADQ K EA I ELLVGLNY+
Sbjct: 269 ILEWLAPLAHNMIRWQSERSFEQQNLVSRTNVLLVQTLYFADQEKTEAIITELLVGLNYI 328

Query: 348 WRHDRDLRANSLMEYASNRDLDEYLE 271
WR R+L A +L+E AS++ +EYL+
Sbjct: 329 WRFGRELNAKALLECASSKIFEEYLD 354


>tr|A7NX45|A7NX45_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020176001
PE=4 SV=1
Length = 530

Score = 122 bits (306), Expect = 1e-26
Identities = 58/92 (63%), Positives = 76/92 (82%)
Frame = -3

Query: 537 LERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVGL 358
L+ +L WLAPLAHNMIRWQSE NFEQQQ++ RTNVLLLQTLYFAD+ K E+AI ELLVGL
Sbjct: 433 LDGILRWLAPLAHNMIRWQSERNFEQQQIVTRTNVLLLQTLYFADREKTESAICELLVGL 492

Query: 357 NYLWRHDRDLRANSLMEYASNRDLDEYLEWQL 262
NY+ R++ + N+L++ AS+ D ++ +EWQ+
Sbjct: 493 NYICRYEH--QQNALLDCASSFDFEDCMEWQM 522


>tr|A5C6D9|A5C6D9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_017371 PE=4 SV=1
Length = 583

Score = 122 bits (306), Expect = 1e-26
Identities = 58/92 (63%), Positives = 76/92 (82%)
Frame = -3

Query: 537 LERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVGL 358
L+ +L WLAPLAHNMIRWQSE NFEQQQ++ RTNVLLLQTLYFAD+ K E+AI ELLVGL
Sbjct: 486 LDGILRWLAPLAHNMIRWQSERNFEQQQIVTRTNVLLLQTLYFADREKTESAICELLVGL 545

Query: 357 NYLWRHDRDLRANSLMEYASNRDLDEYLEWQL 262
NY+ R++ + N+L++ AS+ D ++ +EWQ+
Sbjct: 546 NYICRYEH--QQNALLDCASSFDFEDCMEWQM 575


>tr|Q5H9X6|Q5H9X6_ORYSA P0650D04.6 protein OS=Oryza sativa
GN=P0650D04.6 PE=4 SV=1
Length = 542

Score = 120 bits (302), Expect = 4e-26
Identities = 57/93 (61%), Positives = 76/93 (81%)
Frame = -3

Query: 540 TLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVG 361
TLE+ L WLAP+AHNMIRWQ+E NFEQQQ++ + NVLLLQTLYFAD+ K EA I ELLVG
Sbjct: 451 TLEKTLTWLAPMAHNMIRWQAERNFEQQQIVLKGNVLLLQTLYFADREKTEAVICELLVG 510

Query: 360 LNYLWRHDRDLRANSLMEYASNRDLDEYLEWQL 262
LNY+ R+++ + N+L++ +S+ D D+ +EWQL
Sbjct: 511 LNYICRYEQ--QQNALLDCSSSLDFDDCMEWQL 541


>tr|Q0JF28|Q0JF28_ORYSJ Os04g0169500 protein OS=Oryza sativa subsp.
japonica GN=Os04g0169500 PE=4 SV=1
Length = 106

Score = 120 bits (302), Expect = 4e-26
Identities = 57/93 (61%), Positives = 76/93 (81%)
Frame = -3

Query: 540 TLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVG 361
TLE+ L WLAP+AHNMIRWQ+E NFEQQQ++ + NVLLLQTLYFAD+ K EA I ELLVG
Sbjct: 15 TLEKTLTWLAPMAHNMIRWQAERNFEQQQIVLKGNVLLLQTLYFADREKTEAVICELLVG 74

Query: 360 LNYLWRHDRDLRANSLMEYASNRDLDEYLEWQL 262
LNY+ R+++ + N+L++ +S+ D D+ +EWQL
Sbjct: 75 LNYICRYEQ--QQNALLDCSSSLDFDDCMEWQL 105


>tr|A2XQC0|A2XQC0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14830 PE=4 SV=1
Length = 499

Score = 120 bits (302), Expect = 4e-26
Identities = 57/93 (61%), Positives = 76/93 (81%)
Frame = -3

Query: 540 TLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVG 361
TLE+ L WLAP+AHNMIRWQ+E NFEQQQ++ + NVLLLQTLYFAD+ K EA I ELLVG
Sbjct: 408 TLEKTLTWLAPMAHNMIRWQAERNFEQQQIVLKGNVLLLQTLYFADREKTEAVICELLVG 467

Query: 360 LNYLWRHDRDLRANSLMEYASNRDLDEYLEWQL 262
LNY+ R+++ + N+L++ +S+ D D+ +EWQL
Sbjct: 468 LNYICRYEQ--QQNALLDCSSSLDFDDCMEWQL 498


>tr|A9RSB7|A9RSB7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_22604 PE=4 SV=1
Length = 481

Score = 117 bits (293), Expect = 4e-25
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = -3

Query: 537 LERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVELLVGL 358
LER+L WLAPLAHNMIRWQSEHNFEQQQVL RTN LLLQTLYFAD AK EAAI ELLVGL
Sbjct: 413 LERILSWLAPLAHNMIRWQSEHNFEQQQVLSRTNCLLLQTLYFADLAKTEAAITELLVGL 472

Query: 357 NYLWRHDRD 331
NY+ H+++
Sbjct: 473 NYVCGHEQE 481


>tr|Q9LTD4|Q9LTD4_ARATH Similarity to unknown protein OS=Arabidopsis
thaliana PE=4 SV=1
Length = 531

Score = 115 bits (289), Expect = 1e-24
Identities = 57/93 (61%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Frame = -3

Query: 540 TLERVLGWLAPLAHNMIRWQSEHNFEQQ-QVLPRTNVLLLQTLYFADQAKAEAAIVELLV 364
T++ +L WLAPLAHNMIRWQSE NFEQQ Q++ RTNVLLLQTLYFAD+ K EAAI +LLV
Sbjct: 432 TIDGILSWLAPLAHNMIRWQSERNFEQQNQIVKRTNVLLLQTLYFADREKTEAAICKLLV 491

Query: 363 GLNYLWRHDRDLRANSLMEYASNRDLDEYLEWQ 265
GLNY+ +++ + N+L++ AS+ D ++ EWQ
Sbjct: 492 GLNYICHYEQ--QQNALLDCASSFDYEDCFEWQ 522