BP912160
Clone id YMU001_000015_G08
Library
Length 244
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTGATCACTTGTAAAAGCTGAATTTAAATACTAGCAGAGCTTGAA
CCATTAAGATAGGTTCAAGCACTAAATCAAGGTTAGCGCAATCAAATTTTTCGTATATAA
CTACAACCCTGACCCAGAAGTCTCTTTCAGGTCAGAGAACTCTTTCTGGCTGTAAACTCG
CTTAAGCAGATCTTGTATCTTTGCCATCTGAAGAGCACTCTGCTGTGGCCGAGAGTGATC
CTGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912160|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G08.
(227 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A9NV71
Definition tr|A9NV71|A9NV71_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 48
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912160|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G08.
(227 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NV71|A9NV71_PICSI Putative uncharacterized protein OS=Picea... 33 9.3

>tr|A9NV71|A9NV71_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 623

Score = 32.7 bits (73), Expect = 9.3
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2

Query: 226 QDHSRPQQSALQM---AKIQDLLKRVYSQKEFSDLKETSGSGL*LYTK 92
Q+HSR Q QM KIQDLLK VY+ + +T SG Y+K
Sbjct: 575 QEHSRLQPDPSQMLMLCKIQDLLKTVYNVPKTEPQSQTDLSGPITYSK 622