BP912161 |
Clone id |
YMU001_000015_G09 |
Library |
YMU01 |
Length |
505 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_G09. |
Accession |
BP912161 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCCCCACAACACTCTTCTTCCTTTCCTCTGTCTCACATTATAAACAAAGCTAATGGCTTT GGTTCTCACTGAATAGGAATGGAACGGCACGCCAAAACTCATCCAAGTGTTCTGAAGGCG TGCACACATTGGATACAGACATCACATCCGAACCATCTTTCAGCTCCCAATGTTTCAAAC TCACGTTCAATTTGAGCTATATCTGAGTTTCAAACCTTCCTTTTGACTTGAATACACAAC CCAAGCAATACTGGCACTATGAAGCATTGAAGATCACCACGCTGATTTTGGTGCAGTCCA GTTCACTCCTTTCTCTACAGCCTCTTTCTTAAGATTAGCTATATCTGCCTCAATTTGAGC GCAGGCATTTTCGATATCAATGTTTTTTTGGCACAGCTCCTTCCATTGAGTGGAAAGCCG GCTTAGCTCAACAGCGACAGCTTGCTGGTTTAGATTTCTTTCCTTATTCAGCTCCTCGAT CTGTTGCTTGTAATCCTTCACCATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54SG7 |
Definition |
sp|Q54SG7|SPF27_DICDI Pre-mRNA-splicing factor spf27 OS=Dictyostelium discoideum |
Align length |
54 |
Score (bit) |
47.4 |
E-value |
4.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SH09 |
Definition |
tr|A9SH09|A9SH09_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
69 |
Score (bit) |
88.2 |
E-value |
2.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912161|Adiantum capillus-veneris mRNA, clone: YMU001_000015_G09. (505 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SH09|A9SH09_PHYPA Predicted protein OS=Physcomitrella paten... 88 2e-16 tr|A9NZJ0|A9NZJ0_PICSI Putative uncharacterized protein OS=Picea... 79 1e-13 tr|A7PH25|A7PH25_VITVI Chromosome chr17 scaffold_16, whole genom... 76 1e-12 tr|Q9LV24|Q9LV24_ARATH Dbj|BAA90345.1 OS=Arabidopsis thaliana PE... 72 2e-11 tr|Q949S9|Q949S9_ARATH Putative uncharacterized protein At3g1816... 72 2e-11 tr|Q5NB99|Q5NB99_ORYSJ Putative uncharacterized protein P0453A06... 62 1e-08 tr|B6TVN1|B6TVN1_MAIZE BCAS2 protein OS=Zea mays PE=2 SV=1 62 1e-08 tr|B8AC69|B8AC69_ORYSI Putative uncharacterized protein OS=Oryza... 60 5e-08 tr|A7S9N3|A7S9N3_NEMVE Predicted protein OS=Nematostella vectens... 48 2e-04 tr|B6NKL6|B6NKL6_BRAFL Putative uncharacterized protein OS=Branc... 47 4e-04 tr|B5XBW1|B5XBW1_SALSA BCAS2 protein homolog OS=Salmo salar GN=B... 46 9e-04 tr|B5X6A9|B5X6A9_SALSA BCAS2 protein homolog OS=Salmo salar GN=B... 46 9e-04 tr|B7PNH7|B7PNH7_IXOSC Putative uncharacterized protein OS=Ixode... 46 9e-04 tr|B0S5U3|B0S5U3_DANRE Novel protein similar to H.sapiens BCAS2,... 45 0.002 tr|B3RT44|B3RT44_TRIAD Putative uncharacterized protein OS=Trich... 45 0.003 tr|Q7QBT8|Q7QBT8_ANOGA AGAP002305-PA OS=Anopheles gambiae GN=AGA... 43 0.008 tr|Q7Z8U7|Q7Z8U7_COPCI Putative uncharacterized protein num1 OS=... 43 0.008 tr|A8N0J9|A8N0J9_COPC7 Putative uncharacterized protein OS=Copri... 43 0.008 tr|Q5KF64|Q5KF64_CRYNE Putative uncharacterized protein OS=Crypt... 41 0.029 tr|Q55R03|Q55R03_CRYNE Putative uncharacterized protein OS=Crypt... 41 0.029 tr|Q4SZ64|Q4SZ64_TETNG Chromosome undetermined SCAF11810, whole ... 41 0.037 tr|Q16U78|Q16U78_AEDAE Splicesome protein, putative OS=Aedes aeg... 41 0.037 tr|Q16U77|Q16U77_AEDAE Splicesome protein, putative OS=Aedes aeg... 41 0.037 tr|A4RZV1|A4RZV1_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.064 tr|B0WA23|B0WA23_CULQU Breast carcinoma amplified sequence 2 OS=... 40 0.083 tr|A9V6D8|A9V6D8_MONBE Predicted protein OS=Monosiga brevicollis... 39 0.11 tr|B5G466|B5G466_TAEGU Putative breast carcinoma amplified seque... 39 0.19 tr|A0DQG4|A0DQG4_PARTE Chromosome undetermined scaffold_6, whole... 38 0.24 tr|B5DFM8|B5DFM8_RAT Breast carcinoma amplified sequence 2 (Brea... 38 0.32 tr|Q3U5M2|Q3U5M2_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.41
>tr|A9SH09|A9SH09_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_232960 PE=4 SV=1 Length = 246
Score = 88.2 bits (217), Expect = 2e-16 Identities = 39/69 (56%), Positives = 57/69 (82%) Frame = -2
Query: 495 DYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKKEAV 316 +Y+++IE LN+ER LNQQA AVEL+ LS+QWKE+ QKN+DIE AC ++EA++ L++EA Sbjct: 176 EYQREIEILNRERKLNQQAAAVELNLLSSQWKEISQKNLDIEEACLKLEAEVLKLREEAE 235
Query: 315 EKGVNWTAP 289 +KG++ T P Sbjct: 236 KKGIDLTQP 244
>tr|A9NZJ0|A9NZJ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 241
Score = 79.0 bits (193), Expect = 1e-13 Identities = 35/62 (56%), Positives = 48/62 (77%) Frame = -2
Query: 498 KDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKKEA 319 +++ Q+IE LN+ER NQQA A EL+ L QWKELC+KNI I+ ACA++E +I N++KEA Sbjct: 172 REHNQEIEVLNRERKFNQQAAAAELNLLEAQWKELCEKNIGIQTACAELEINIENIQKEA 231
Query: 318 VE 313 E Sbjct: 232 GE 233
>tr|A7PH25|A7PH25_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017780001 PE=4 SV=1 Length = 246
Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/71 (49%), Positives = 50/71 (70%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKK 325 + + ++IE +N+ER +QQ A EL+ LS QWKELC+KNI+I ACA+IE +I L++ Sbjct: 164 LAMEQNEKIETVNRERKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRR 223
Query: 324 EAVEKGVNWTA 292 EA E+G N A Sbjct: 224 EAAERGWNLDA 234
>tr|Q9LV24|Q9LV24_ARATH Dbj|BAA90345.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 286
Score = 71.6 bits (174), Expect = 2e-11 Identities = 29/68 (42%), Positives = 50/68 (73%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKK 325 + ++ ++IE++N+ER +QQ + EL+ LS +W++LC KN++I++ACA +E I + KK Sbjct: 205 LAQEQNEEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKK 264
Query: 324 EAVEKGVN 301 EA E+G N Sbjct: 265 EAAERGWN 272
>tr|Q949S9|Q949S9_ARATH Putative uncharacterized protein At3g18165 (Modifier of SNC1) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1 Length = 253
Score = 71.6 bits (174), Expect = 2e-11 Identities = 29/68 (42%), Positives = 50/68 (73%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKK 325 + ++ ++IE++N+ER +QQ + EL+ LS +W++LC KN++I++ACA +E I + KK Sbjct: 172 LAQEQNEEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKK 231
Query: 324 EAVEKGVN 301 EA E+G N Sbjct: 232 EAAERGWN 239
>tr|Q5NB99|Q5NB99_ORYSJ Putative uncharacterized protein P0453A06.28 (Putative uncharacterized protein P0499C11.10) OS=Oryza sativa subsp. japonica GN=P0453A06.28 PE=4 SV=1 Length = 271
Score = 62.4 bits (150), Expect = 1e-08 Identities = 29/67 (43%), Positives = 43/67 (64%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKK 325 M +Y ++IE +N+ER +QQ +L L+T+W+ELCQKNI I+ AC ++ I LK Sbjct: 189 MAVEYNEKIETVNRERKFHQQNTGGQLHALTTEWQELCQKNIAIQAACVDLQNQIDQLKL 248
Query: 324 EAVEKGV 304 A E G+ Sbjct: 249 GAKELGM 255
>tr|B6TVN1|B6TVN1_MAIZE BCAS2 protein OS=Zea mays PE=2 SV=1 Length = 254
Score = 62.4 bits (150), Expect = 1e-08 Identities = 29/67 (43%), Positives = 42/67 (62%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKK 325 M +Y ++IE +N+ER +QQ +L L +W+ELCQKNI I+ AC ++ I LK Sbjct: 175 MAVEYNERIENVNRERKFHQQNTGGQLHALKMEWQELCQKNIAIQAACVDLQNHIDQLKL 234
Query: 324 EAVEKGV 304 EA E G+ Sbjct: 235 EAKELGM 241
>tr|B8AC69|B8AC69_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01292 PE=4 SV=1 Length = 255
Score = 60.5 bits (145), Expect = 5e-08 Identities = 28/64 (43%), Positives = 41/64 (64%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLKK 325 M +Y ++IE +N+ER +QQ +L L+T+W+ELCQKNI I+ AC ++ I LK Sbjct: 174 MAVEYNEKIETVNRERKFHQQNTGGQLHALTTEWQELCQKNIAIQAACVDLQNQIDQLKL 233
Query: 324 EAVE 313 A E Sbjct: 234 GAKE 237
>tr|A7S9N3|A7S9N3_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g168072 PE=4 SV=1 Length = 212
Score = 48.1 bits (113), Expect = 2e-04 Identities = 20/59 (33%), Positives = 35/59 (59%) Frame = -2
Query: 504 MVKDYKQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLK 328 ++ + ++Q++E+N +R Q V+L +L W L KN +IE AC Q+E ++ LK Sbjct: 148 LLMNIRKQVQEINWKRKSEQSQAGVQLKQLEQSWVGLVTKNYEIERACLQLEEEVERLK 206
>tr|B6NKL6|B6NKL6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_115639 PE=4 SV=1 Length = 224
Score = 47.4 bits (111), Expect = 4e-04 Identities = 21/54 (38%), Positives = 32/54 (59%) Frame = -2
Query: 489 KQQIEELNKERNLNQQAVAVELSRLSTQWKELCQKNIDIENACAQIEADIANLK 328 ++QI+E+N +R Q A +L L W L KN +IE AC ++EA+I L+ Sbjct: 151 RKQIQEINWQRKHGQMAAGNQLRELEASWVGLVSKNYEIERACLELEAEITQLR 204
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