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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912163
Clone id YMU001_000015_G11
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACGGAGATTGAGTCAGTTGCTGGCTCTGAGAATGGTTCTGGACCCTCGGCATCTTCAAAA
AAACTATATTTTCTGAATGATACTGTAGAAGCTGAAATTGGGAGCATGAATAGTCAGTTC
GACTTCGGAGCTTTGAGTGAAGGCTATGTAACAATAACACCGGTCGGTTTGATGATGAAT
GCTGAAGCAGAGGTTTTTGATTGGGCATCACAGTGGATATCCACGGCGATCGAGTTTACT
GCAGCTTCTTCTCTATAACAATGTTGCATCATGTTAAACAGTTTATTAAAGCCACATAGA
TTCTTGATATTCAATTCTGAGATAGGCGCATGCAAGGCTGCCGCTTATCGCCTGCGGTTC
CAATTTCTAGCTAGAAGAAGCTTAGAAATAGGCTCCGCGGTCGCATTTCTCTGCTTTTAT
CTTTCTTCACGTGGGTAGTTATCTCTTCATTTTATTGGTACTACATATTTGTGAGACTAT
CGAATTGGGAAAACCTCTAAATTATACATTTGTGGAAAGACAG
■■Homology search results ■■ -
sp_hit_id A7I2X3
Definition sp|A7I2X3|SURE_CAMHC 5'-nucleotidase surE OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
Align length 58
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912163|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G11.
         (523 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7I2X3|SURE_CAMHC 5'-nucleotidase surE OS=Campylobacter homin...    33   1.1  
sp|A1S4E2|SURE_SHEAM 5'-nucleotidase surE OS=Shewanella amazonen...    32   1.8  
sp|Q5QUC6|SURE_IDILO 5'-nucleotidase surE OS=Idiomarina loihiens...    32   1.8  
sp|A7MJ60|SURE_ENTS8 Multifunctional protein surE OS=Enterobacte...    32   1.8  
sp|Q15P28|SURE_PSEA6 5'-nucleotidase surE OS=Pseudoalteromonas a...    31   4.1  
sp|Q3YYB8|SURE_SHISS Multifunctional protein surE OS=Shigella so...    30   5.3  
sp|Q83JY2|SURE_SHIFL Multifunctional protein surE OS=Shigella fl...    30   5.3  
sp|Q0T1H5|SURE_SHIF8 Multifunctional protein surE OS=Shigella fl...    30   5.3  
sp|Q32CI6|SURE_SHIDS Multifunctional protein surE OS=Shigella dy...    30   5.3  
sp|Q31XA6|SURE_SHIBS Multifunctional protein surE OS=Shigella bo...    30   5.3  
sp|P66881|SURE_SALTY Multifunctional protein surE OS=Salmonella ...    30   5.3  
sp|P66882|SURE_SALTI Multifunctional protein surE OS=Salmonella ...    30   5.3  
sp|A9N2D0|SURE_SALPB Multifunctional protein surE OS=Salmonella ...    30   5.3  
sp|Q5PEG4|SURE_SALPA Multifunctional protein surE OS=Salmonella ...    30   5.3  
sp|Q57KJ7|SURE_SALCH Multifunctional protein surE OS=Salmonella ...    30   5.3  
sp|A9MF31|SURE_SALAR Multifunctional protein surE OS=Salmonella ...    30   5.3  
sp|A4VJV2|SURE_PSEU5 5'-nucleotidase surE OS=Pseudomonas stutzer...    30   5.3  
sp|Q1R7U7|SURE_ECOUT Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|P0A840|SURE_ECOLI Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|B1IUT5|SURE_ECOLC Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|P0A841|SURE_ECOL6 Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|Q0TEB4|SURE_ECOL5 Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|A1AET8|SURE_ECOK1 Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|A8A3M3|SURE_ECOHS Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|P0A842|SURE_ECO57 Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|A7ZQI8|SURE_ECO24 Multifunctional protein surE OS=Escherichia...    30   5.3  
sp|Q086A5|SURE_SHEFN 5'-nucleotidase surE OS=Shewanella frigidim...    30   7.0  
sp|Q5F7V9|SURE_NEIG1 5'-nucleotidase surE OS=Neisseria gonorrhoe...    30   7.0  
sp|O29320|SURE_ARCFU 5'-nucleotidase surE OS=Archaeoglobus fulgi...    30   7.0  
sp|A6V1G3|SURE_PSEA7 5'-nucleotidase surE OS=Pseudomonas aerugin...    30   9.1  

>sp|A7I2X3|SURE_CAMHC 5'-nucleotidase surE OS=Campylobacter hominis
           (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
           GN=surE PE=3 SV=1
          Length = 257

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 25  SENGSGPSASSKKLYFLNDT-VEAEIGSMNSQFDFGALSEGYVTITPVGLMMNAEAEV 195
           ++NG  P    KK Y+L    ++ +I S N   D G LSEG+ T+TP+   M A  ++
Sbjct: 194 AQNGINPRG--KKYYWLGKMDIKFDI-SENQNTDIGLLSEGFATLTPIKPDMTAYEQI 248


>sp|A1S4E2|SURE_SHEAM 5'-nucleotidase surE OS=Shewanella amazonensis
           (strain ATCC BAA-1098 / SB2B) GN=surE PE=3 SV=1
          Length = 248

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWI 219
           DFGA++EGYV+ITP+ + + A +++ +  + WI
Sbjct: 214 DFGAVAEGYVSITPLTVDLTAHSQL-NALANWI 245


>sp|Q5QUC6|SURE_IDILO 5'-nucleotidase surE OS=Idiomarina loihiensis
           GN=surE PE=3 SV=1
          Length = 250

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAE---VFDWASQ 213
           DF A+ EGY++ITP+ L M A+     + DW  Q
Sbjct: 215 DFTAIHEGYISITPLSLDMTAQRHTDTLTDWLEQ 248


>sp|A7MJ60|SURE_ENTS8 Multifunctional protein surE OS=Enterobacter
           sakazakii (strain ATCC BAA-894) GN=surE PE=3 SV=1
          Length = 253

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWISTA 228
           DF A+ EGYV++TP+ + + A +   D  ++W+S+A
Sbjct: 213 DFAAVDEGYVSVTPLHVDLTAHS-AQDVVTRWLSSA 247


>sp|Q15P28|SURE_PSEA6 5'-nucleotidase surE OS=Pseudoalteromonas
           atlantica (strain T6c / BAA-1087) GN=surE PE=3 SV=1
          Length = 248

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWIS 222
           DF A+SEG+ ++TP+ + M A   + D   QWI+
Sbjct: 214 DFHAISEGFCSVTPLSVDMTAHQSLED-VRQWIT 246


>sp|Q3YYB8|SURE_SHISS Multifunctional protein surE OS=Shigella
           sonnei (strain Ss046) GN=surE PE=3 SV=1
          Length = 253

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWIST 225
           DF A+ EGYV+ITP+ + + A +   D  S W+++
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|Q83JY2|SURE_SHIFL Multifunctional protein surE OS=Shigella
           flexneri GN=surE PE=3 SV=2
          Length = 253

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWIST 225
           DF A+ EGYV+ITP+ + + A +   D  S W+++
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|Q0T1H5|SURE_SHIF8 Multifunctional protein surE OS=Shigella
           flexneri serotype 5b (strain 8401) GN=surE PE=3 SV=2
          Length = 253

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWIST 225
           DF A+ EGYV+ITP+ + + A +   D  S W+++
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|Q32CI6|SURE_SHIDS Multifunctional protein surE OS=Shigella
           dysenteriae serotype 1 (strain Sd197) GN=surE PE=3 SV=1
          Length = 253

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWIST 225
           DF A+ EGYV+ITP+ + + A +   D  S W+++
Sbjct: 213 DFAAVDEGYVSITPLRVDLTAHS-AQDVVSDWLNS 246


>sp|Q31XA6|SURE_SHIBS Multifunctional protein surE OS=Shigella
           boydii serotype 4 (strain Sb227) GN=surE PE=3 SV=1
          Length = 253

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 121 DFGALSEGYVTITPVGLMMNAEAEVFDWASQWIST 225
           DF A+ EGYV+ITP+ + + A +   D  S W+++
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246
tr_hit_id B8LK94
Definition tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 84
Score (bit) 62.8
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912163|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_G11.
         (523 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea...    63   1e-08
tr|A9SJL0|A9SJL0_PHYPA Predicted protein OS=Physcomitrella paten...    47   4e-04
tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome ...    47   4e-04
tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Popul...    46   0.001
tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1          41   0.032
tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1          40   0.054
tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana G...    40   0.092
tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized prote...    40   0.092
tr|Q0JJY1|Q0JJY1_ORYSJ cDNA clone:J023046I03, full insert sequen...    40   0.092
tr|A2ZX36|A2ZX36_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.092
tr|A2WUB4|A2WUB4_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.092
tr|Q5CQX8|Q5CQX8_CRYPV 9 transmembrane domain protein OS=Cryptos...    34   5.0  
tr|Q8LAM2|Q8LAM2_ARATH Putative uncharacterized protein (At4g149...    34   5.1  
tr|Q56WK2|Q56WK2_ARATH Putative uncharacterized protein At4g1493...    34   5.1  
tr|A3WM66|A3WM66_9GAMM SurE OS=Idiomarina baltica OS145 GN=OS145...    33   6.6  

>tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 394

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 35/84 (41%), Positives = 50/84 (59%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           E+ESV  +      S + KK YF  +  E E G M+   D+GAL +G+VTITP+GL  NA
Sbjct: 312 EVESVGEAGKQETQSVAVKK-YFRVEFSEHEHGEMDDDLDYGALEQGFVTITPLGLTCNA 370

Query: 184 EAEVFDWASQWISTAIEFTAASSL 255
           + +     + WI+TAI+  A +SL
Sbjct: 371 QLDTCTSVATWITTAIDQDAPASL 394


>tr|A9SJL0|A9SJL0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_213060 PE=4 SV=1
          Length = 114

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           ++ESV  +E        S ++ F  +  E E+G++    DFGAL +GYV+IT +GL  + 
Sbjct: 37  DVESVGANEESD--KEPSPRMRFRLEGAEQELGAIEPDHDFGALQQGYVSITALGLDTHV 94

Query: 184 EAEVFDWASQWIS 222
           EA       +W++
Sbjct: 95  EATTRAQVEKWVA 107


>tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034123001
           PE=4 SV=1
          Length = 384

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 20/58 (34%), Positives = 36/58 (62%)
 Frame = +1

Query: 61  KLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNAEAEVFDWASQWISTAIE 234
           K YF  + V+ E   ++   DF AL  G+V +TP+ L  + E+++   AS+W++TA++
Sbjct: 323 KKYFRLEFVDKEQEGLDEDLDFRALENGFVAVTPLSLSQHNESDIHTTASEWMNTALQ 380


>tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 394

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           EIESV     G    ++  K YF  + ++ E+   +   DF A+  G+V ITP+ L    
Sbjct: 318 EIESVGA---GGKSDSNRVKKYFRMEFLDKELEDTDEDLDFRAVENGFVAITPLSLSPRI 374

Query: 184 EAEVFDWASQWISTAI 231
           E +    AS WIS+A+
Sbjct: 375 EEDTHIAASDWISSAL 390


>tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1
          Length = 418

 Score = 41.2 bits (95), Expect = 0.032
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           E+ESVA +  G        K  F  + VE     ++   D  AL  G++++TP+ +    
Sbjct: 316 EVESVAAA--GKQEIREVVKKLFRAEFVEKRYEGLDEDIDLRALENGFISVTPLNVHGQV 373

Query: 184 EAEVFDWASQWISTAI 231
           E E+   AS W+S A+
Sbjct: 374 ELEIGATASDWLSAAV 389


>tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1
          Length = 401

 Score = 40.4 bits (93), Expect = 0.054
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           E+ESVA +  G   +    K  F  + VE +   ++   D  AL  G+V++TP+ +    
Sbjct: 309 EVESVATA--GKQETREVVKKLFRAEFVERQHQGLDEDTDLRALENGFVSVTPLNVHGQV 366

Query: 184 EAEVFDWASQWISTAI 231
           E E+   AS W+S A+
Sbjct: 367 EPEIQAPASDWLSAAV 382


>tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana
           GN=F3N23.8 PE=4 SV=1
          Length = 359

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 24/76 (31%), Positives = 40/76 (52%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           EIESV  +    G + +  K +F  + +  E    +   D  AL +G+V++TP  L+   
Sbjct: 284 EIESVGVA----GKTDTRVKKFFRLEFLAKEQEHTDEDLDVKALEDGFVSVTPFSLLPKT 339

Query: 184 EAEVFDWASQWISTAI 231
           ++E    AS+WIS A+
Sbjct: 340 DSETQAAASEWISKAL 355


>tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized protein
           At1g72880) OS=Arabidopsis thaliana GN=At1g72880 PE=2
           SV=1
          Length = 385

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 24/76 (31%), Positives = 40/76 (52%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           EIESV  +    G + +  K +F  + +  E    +   D  AL +G+V++TP  L+   
Sbjct: 310 EIESVGVA----GKTDTRVKKFFRLEFLAKEQEHTDEDLDVKALEDGFVSVTPFSLLPKT 365

Query: 184 EAEVFDWASQWISTAI 231
           ++E    AS+WIS A+
Sbjct: 366 DSETQAAASEWISKAL 381


>tr|Q0JJY1|Q0JJY1_ORYSJ cDNA clone:J023046I03, full insert sequence
           OS=Oryza sativa subsp. japonica GN=Os01g0709400 PE=2
           SV=1
          Length = 418

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           E+ESVA +  G   +    K  F  +  E +   ++   D  AL  G++++TP+ +  N 
Sbjct: 314 EVESVAST--GKAEAREVVKKLFRAEFTEKQHECLDEDIDLRALENGFISVTPLNIHGNV 371

Query: 184 EAEVFDWASQWISTAI 231
             E    AS W+S A+
Sbjct: 372 APETGAPASDWLSVAV 387


>tr|A2ZX36|A2ZX36_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003108 PE=4 SV=1
          Length = 447

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = +1

Query: 4   EIESVAGSENGSGPSASSKKLYFLNDTVEAEIGSMNSQFDFGALSEGYVTITPVGLMMNA 183
           E+ESVA +  G   +    K  F  +  E +   ++   D  AL  G++++TP+ +  N 
Sbjct: 343 EVESVAST--GKAEAREVVKKLFRAEFTEKQHECLDEDIDLRALENGFISVTPLNIHGNV 400

Query: 184 EAEVFDWASQWISTAI 231
             E    AS W+S A+
Sbjct: 401 APETGAPASDWLSVAV 416