BP912173
Clone id YMU001_000015_H11
Library
Length 483
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000015_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTGTTTTTTTTTTAAAGCAAATCACCAAAAACTTATGCAATAGACCAGAACAAGCTAC
ATAAAAGCCAGCCATGTGACGTGGAAAACGCTTGGAATTCAGCAGCTGCACATTTAAGGA
CTCAATATTCAAGTCAAAAATGCGGGCACAATCCAATTCAGACTGGCCATCTGAAAATAT
ACTTCTATTACATCTAAAGAAAGGGCATTACAAAATCGGTTTACTGCCTCCCTTTGCAAA
AACCTTAGTCAAACAGACTGAATCCCATGTCATCATCGGACTCCTCCTCGGGCTCCTTCT
TTTCCTCTTTCTCCTCCTTTTTCTCCTCAACTGCTGCGGCAGGACCTGCACCACCACCAC
CTCCTGCACTGACCACAACGCCACCAACTCCACCTGCAGGGACAGAAGCAAGTTTCTCCT
TTCCGGCAGCAATGAGCTCCACAATGTCCTTGCCTTTCAACTCGCTCAGTAGCAAGTCTA
TCC
■■Homology search results ■■ -
sp_hit_id Q9SLF7
Definition sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana
Align length 24
Score (bit) 39.7
E-value 0.007
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912173|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_H11.
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabi... 40 0.007
sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1 OS=Arabi... 40 0.007
sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Partheni... 39 0.015
sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea ma... 37 0.033
sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4 OS=Arabi... 37 0.033
sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternar... 36 0.073
sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha OS=Sc... 35 0.12
sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea ma... 35 0.21
sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C OS=Schizo... 34 0.28
sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta OS=Sch... 34 0.28
sp|Q9C3Z5|RLA2_PODAN 60S acidic ribosomal protein P2 OS=Podospor... 33 0.62
sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2 OS=Branchio... 33 0.62
sp|Q9LH85|RLA23_ARATH 60S acidic ribosomal protein P2-3 OS=Arabi... 33 0.62
sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium... 33 0.80
sp|P42039|RLA2_CLAHE 60S acidic ribosomal protein P2 OS=Cladospo... 32 1.4
sp|Q9LUK2|RLA25_ARATH 60S acidic ribosomal protein P2-5 OS=Arabi... 31 2.3
sp|Q5ZVZ3|GLO2_LEGPH Hydroxyacylglutathione hydrolase OS=Legione... 31 2.4
sp|A5IBE7|GLO2_LEGPC Hydroxyacylglutathione hydrolase OS=Legione... 31 2.4
sp|Q5X5R2|GLO2_LEGPA Hydroxyacylglutathione hydrolase OS=Legione... 31 2.4
sp|Q5WX41|GLO2_LEGPL Hydroxyacylglutathione hydrolase OS=Legione... 31 3.1
sp|P35456|UPAR_MOUSE Urokinase plasminogen activator surface rec... 30 4.0
sp|Q7TN02|MED26_MOUSE Mediator of RNA polymerase II transcriptio... 30 4.0
sp|Q0H8Z3|IEND1_USTMA Probable intron-encoded DNA endonuclease 1... 30 4.1
sp|P49616|UPAR_RAT Urokinase plasminogen activator surface recep... 30 5.2
sp|Q9ZI38|RL6_AQUPY 50S ribosomal protein L6 OS=Aquifex pyrophil... 30 5.2
sp|O67565|RL6_AQUAE 50S ribosomal protein L6 OS=Aquifex aeolicus... 30 5.2
sp|P53199|ERG26_YEAST Sterol-4-alpha-carboxylate 3-dehydrogenase... 30 5.2
sp|Q9UUZ6|RLA2_ASPFU 60S acidic ribosomal protein P2 OS=Aspergil... 30 6.8
sp|Q9HFQ5|RLA2_CANAL 60S acidic ribosomal protein P2-A OS=Candid... 29 8.9

>sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2
OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1
Length = 115

Score = 39.7 bits (91), Expect = 0.007
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLL E+KGKD+ ELIAAG+EKL
Sbjct: 39 IELLLKEVKGKDLAELIAAGREKL 62


>sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1
OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2
Length = 115

Score = 39.7 bits (91), Expect = 0.007
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLL E+KGKD+ ELIAAG+EKL
Sbjct: 39 IELLLKEVKGKDLAELIAAGREKL 62


>sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium
argentatum PE=3 SV=1
Length = 114

Score = 38.5 bits (88), Expect = 0.015
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLS++KGKDI ELIA+G+E+L
Sbjct: 39 IELLLSQVKGKDITELIASGRERL 62


>sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea mays
GN=RPP2A PE=1 SV=3
Length = 112

Score = 37.4 bits (85), Expect = 0.033
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEK 398
++LLLS+L GKDI ELIAAG+EK
Sbjct: 39 MELLLSQLSGKDITELIAAGREK 61


>sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4
OS=Arabidopsis thaliana GN=RPP2D PE=2 SV=1
Length = 111

Score = 37.4 bits (85), Expect = 0.033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLL E+ GKDI ELIA+G+EKL
Sbjct: 39 IELLLKEVSGKDIAELIASGREKL 62


>sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria
alternata GN=ALTA5 PE=1 SV=1
Length = 113

Score = 36.2 bits (82), Expect = 0.073
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
+D L+SEL+GKDI ELIA+G EKL
Sbjct: 39 LDKLISELEGKDINELIASGSEKL 62


>sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha
OS=Schizosaccharomyces pombe GN=rpp201 PE=1 SV=1
Length = 110

Score = 35.4 bits (80), Expect = 0.12
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+ L++EL GKDI ELIAAG EKL
Sbjct: 39 IETLINELNGKDIDELIAAGNEKL 62


>sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays
GN=RPP2B PE=1 SV=1
Length = 113

Score = 34.7 bits (78), Expect = 0.21
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
++ LL+ELK KDI E+IAAG+E+L
Sbjct: 39 LEFLLTELKDKDITEVIAAGRERL 62


>sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C
OS=Schizosaccharomyces pombe GN=rpp203 PE=1 SV=2
Length = 110

Score = 34.3 bits (77), Expect = 0.28
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
++ L+ EL GKDI ELIAAG EKL
Sbjct: 39 VEALIKELDGKDIDELIAAGNEKL 62


>sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta
OS=Schizosaccharomyces pombe GN=rpp202 PE=1 SV=1
Length = 110

Score = 34.3 bits (77), Expect = 0.28
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
++ L+SEL GK+I ELIAAG EKL
Sbjct: 39 VESLISELNGKNIEELIAAGNEKL 62


tr_hit_id A8QJ72
Definition tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglans regia
Align length 24
Score (bit) 42.0
E-value 0.015
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912173|Adiantum capillus-veneris mRNA, clone:
YMU001_000015_H11.
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglan... 42 0.015
tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein... 41 0.034
tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genom... 41 0.034
tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome... 41 0.034
tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus du... 40 0.059
tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromos... 40 0.077
tr|Q5YJR8|Q5YJR8_HYAOR 60S acidic ribosomal protein OS=Hyacinthu... 39 0.10
tr|B7FMX7|B7FMX7_MEDTR Putative uncharacterized protein OS=Medic... 39 0.10
tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Popul... 39 0.13
tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Popul... 39 0.13
tr|A9P894|A9P894_POPTR Putative uncharacterized protein OS=Popul... 39 0.13
tr|A7Q7N2|A7Q7N2_VITVI Chromosome undetermined scaffold_60, whol... 39 0.17
tr|A5B8D1|A5B8D1_VITVI Putative uncharacterized protein OS=Vitis... 39 0.17
tr|A9U0Z9|A9U0Z9_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.22
tr|Q38M67|Q38M67_SOLTU Putative uncharacterized protein OS=Solan... 38 0.29
tr|A9S6G5|A9S6G5_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.29
tr|A9RV72|A9RV72_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.29
tr|A9RKJ0|A9RKJ0_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.29
tr|A5BNT4|A5BNT4_VITVI Putative uncharacterized protein OS=Vitis... 38 0.29
tr|Q9ZRF5|Q9ZRF5_MAIZE Acidic ribosomal protein P2a-4 (Fragment)... 37 0.38
tr|Q9SM26|Q9SM26_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|Q9SM25|Q9SM25_MAIZE Acidic ribosomal protein P2a-3 (Fragment)... 37 0.38
tr|Q0WRF9|Q0WRF9_ARATH Acidic ribosomal protein P2-like OS=Arabi... 37 0.38
tr|B6UE07|B6UE07_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|B6U978|B6U978_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|B6SIT5|B6SIT5_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|B6SIG8|B6SIG8_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|B4FVI4|B4FVI4_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|B4FI88|B4FI88_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38
tr|Q677G0|Q677G0_HYAOR Acidic ribosomal protein OS=Hyacinthus or... 37 0.50

>tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglans
regia PE=4 SV=1
Length = 113

Score = 42.0 bits (97), Expect = 0.015
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLSE+KGKDI ELIAAG+EKL
Sbjct: 39 IELLLSEVKGKDITELIAAGREKL 62


>tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein
OS=Solanum tuberosum PE=4 SV=1
Length = 115

Score = 40.8 bits (94), Expect = 0.034
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLS++KGKDI ELIAAG+EKL
Sbjct: 39 IELLLSQVKGKDITELIAAGREKL 62


>tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034930001
PE=4 SV=1
Length = 111

Score = 40.8 bits (94), Expect = 0.034
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLSE+KGKDI ELIA+G+EKL
Sbjct: 39 IELLLSEVKGKDITELIASGREKL 62


>tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021645001
PE=4 SV=1
Length = 114

Score = 40.8 bits (94), Expect = 0.034
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLSE+KGKDI ELIA+G+EKL
Sbjct: 39 IELLLSEVKGKDITELIASGREKL 62


>tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus
dulcis GN=AL60SRP PE=4 SV=1
Length = 113

Score = 40.0 bits (92), Expect = 0.059
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I LLLSE+KGKDI ELIA+G+EKL
Sbjct: 39 IQLLLSEVKGKDITELIASGREKL 62


>tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromosome
chr6 scaffold_25, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00022049001 PE=4 SV=1
Length = 113

Score = 39.7 bits (91), Expect = 0.077
Identities = 18/24 (75%), Positives = 23/24 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLL+E+KGKDI ELIA+G+EKL
Sbjct: 39 IELLLAEVKGKDITELIASGREKL 62


>tr|Q5YJR8|Q5YJR8_HYAOR 60S acidic ribosomal protein OS=Hyacinthus
orientalis PE=4 SV=1
Length = 114

Score = 39.3 bits (90), Expect = 0.10
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEK 398
I+LLLSE+KGKDI ELIA+G+EK
Sbjct: 39 IELLLSEVKGKDITELIASGREK 61


>tr|B7FMX7|B7FMX7_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 113

Score = 39.3 bits (90), Expect = 0.10
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLSE+KGKD ELIA+G+EKL
Sbjct: 39 IELLLSEVKGKDFAELIASGREKL 62


>tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 113

Score = 38.9 bits (89), Expect = 0.13
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLS +KGKDI ELIA+G+EKL
Sbjct: 39 IELLLSSVKGKDITELIASGREKL 62


>tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 114

Score = 38.9 bits (89), Expect = 0.13
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3

Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395
I+LLLS +KGKDI ELIA+G+EKL
Sbjct: 39 IELLLSSVKGKDITELIASGREKL 62