BP912173 |
Clone id |
YMU001_000015_H11 |
Library |
YMU01 |
Length |
483 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_H11. |
Accession |
BP912173 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL559Contig1 |
Sequence |
TTTTGTTTTTTTTTTAAAGCAAATCACCAAAAACTTATGCAATAGACCAGAACAAGCTAC ATAAAAGCCAGCCATGTGACGTGGAAAACGCTTGGAATTCAGCAGCTGCACATTTAAGGA CTCAATATTCAAGTCAAAAATGCGGGCACAATCCAATTCAGACTGGCCATCTGAAAATAT ACTTCTATTACATCTAAAGAAAGGGCATTACAAAATCGGTTTACTGCCTCCCTTTGCAAA AACCTTAGTCAAACAGACTGAATCCCATGTCATCATCGGACTCCTCCTCGGGCTCCTTCT TTTCCTCTTTCTCCTCCTTTTTCTCCTCAACTGCTGCGGCAGGACCTGCACCACCACCAC CTCCTGCACTGACCACAACGCCACCAACTCCACCTGCAGGGACAGAAGCAAGTTTCTCCT TTCCGGCAGCAATGAGCTCCACAATGTCCTTGCCTTTCAACTCGCTCAGTAGCAAGTCTA TCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLF7 |
Definition |
sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana |
Align length |
24 |
Score (bit) |
39.7 |
E-value |
0.007 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8QJ72 |
Definition |
tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglans regia |
Align length |
24 |
Score (bit) |
42.0 |
E-value |
0.015 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912173|Adiantum capillus-veneris mRNA, clone: YMU001_000015_H11. (468 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglan... 42 0.015 tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein... 41 0.034 tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genom... 41 0.034 tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome... 41 0.034 tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus du... 40 0.059 tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromos... 40 0.077 tr|Q5YJR8|Q5YJR8_HYAOR 60S acidic ribosomal protein OS=Hyacinthu... 39 0.10 tr|B7FMX7|B7FMX7_MEDTR Putative uncharacterized protein OS=Medic... 39 0.10 tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Popul... 39 0.13 tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Popul... 39 0.13 tr|A9P894|A9P894_POPTR Putative uncharacterized protein OS=Popul... 39 0.13 tr|A7Q7N2|A7Q7N2_VITVI Chromosome undetermined scaffold_60, whol... 39 0.17 tr|A5B8D1|A5B8D1_VITVI Putative uncharacterized protein OS=Vitis... 39 0.17 tr|A9U0Z9|A9U0Z9_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.22 tr|Q38M67|Q38M67_SOLTU Putative uncharacterized protein OS=Solan... 38 0.29 tr|A9S6G5|A9S6G5_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.29 tr|A9RV72|A9RV72_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.29 tr|A9RKJ0|A9RKJ0_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.29 tr|A5BNT4|A5BNT4_VITVI Putative uncharacterized protein OS=Vitis... 38 0.29 tr|Q9ZRF5|Q9ZRF5_MAIZE Acidic ribosomal protein P2a-4 (Fragment)... 37 0.38 tr|Q9SM26|Q9SM26_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|Q9SM25|Q9SM25_MAIZE Acidic ribosomal protein P2a-3 (Fragment)... 37 0.38 tr|Q0WRF9|Q0WRF9_ARATH Acidic ribosomal protein P2-like OS=Arabi... 37 0.38 tr|B6UE07|B6UE07_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|B6U978|B6U978_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|B6SIT5|B6SIT5_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|B6SIG8|B6SIG8_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|B4FVI4|B4FVI4_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|B4FI88|B4FI88_MAIZE 60S acidic ribosomal protein P2A OS=Zea m... 37 0.38 tr|Q677G0|Q677G0_HYAOR Acidic ribosomal protein OS=Hyacinthus or... 37 0.50
>tr|A8QJ72|A8QJ72_9ROSI 60S acidic ribosomal protein P2 OS=Juglans regia PE=4 SV=1 Length = 113
Score = 42.0 bits (97), Expect = 0.015 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLSE+KGKDI ELIAAG+EKL Sbjct: 39 IELLLSEVKGKDITELIAAGREKL 62
>tr|Q3HVP0|Q3HVP0_SOLTU 60s acidic ribosomal protein-like protein OS=Solanum tuberosum PE=4 SV=1 Length = 115
Score = 40.8 bits (94), Expect = 0.034 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLS++KGKDI ELIAAG+EKL Sbjct: 39 IELLLSQVKGKDITELIAAGREKL 62
>tr|A7QBE6|A7QBE6_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034930001 PE=4 SV=1 Length = 111
Score = 40.8 bits (94), Expect = 0.034 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLSE+KGKDI ELIA+G+EKL Sbjct: 39 IELLLSEVKGKDITELIASGREKL 62
>tr|A7PPG7|A7PPG7_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021645001 PE=4 SV=1 Length = 114
Score = 40.8 bits (94), Expect = 0.034 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLSE+KGKDI ELIA+G+EKL Sbjct: 39 IELLLSEVKGKDITELIASGREKL 62
>tr|Q8H2B9|Q8H2B9_PRUDU 60s acidic ribosomal protein OS=Prunus dulcis GN=AL60SRP PE=4 SV=1 Length = 113
Score = 40.0 bits (92), Expect = 0.059 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I LLLSE+KGKDI ELIA+G+EKL Sbjct: 39 IQLLLSEVKGKDITELIASGREKL 62
>tr|A5AGQ2|A5AGQ2_VITVI Putative uncharacterized protein (Chromosome chr6 scaffold_25, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00022049001 PE=4 SV=1 Length = 113
Score = 39.7 bits (91), Expect = 0.077 Identities = 18/24 (75%), Positives = 23/24 (95%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLL+E+KGKDI ELIA+G+EKL Sbjct: 39 IELLLAEVKGKDITELIASGREKL 62
>tr|Q5YJR8|Q5YJR8_HYAOR 60S acidic ribosomal protein OS=Hyacinthus orientalis PE=4 SV=1 Length = 114
Score = 39.3 bits (90), Expect = 0.10 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEK 398 I+LLLSE+KGKDI ELIA+G+EK Sbjct: 39 IELLLSEVKGKDITELIASGREK 61
>tr|B7FMX7|B7FMX7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 113
Score = 39.3 bits (90), Expect = 0.10 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLSE+KGKD ELIA+G+EKL Sbjct: 39 IELLLSEVKGKDFAELIASGREKL 62
>tr|A9PCM7|A9PCM7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 113
Score = 38.9 bits (89), Expect = 0.13 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLS +KGKDI ELIA+G+EKL Sbjct: 39 IELLLSSVKGKDITELIASGREKL 62
>tr|A9PAR7|A9PAR7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 114
Score = 38.9 bits (89), Expect = 0.13 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = -3
Query: 466 IDLLLSELKGKDIVELIAAGKEKL 395 I+LLLS +KGKDI ELIA+G+EKL Sbjct: 39 IELLLSSVKGKDITELIASGREKL 62
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