BP912174
Clone id YMU001_000016_A01
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGTGAGATACCACTCTAGAAGAACTAGAATTCTAACCTTGTGTCAAGAATTACGGACCA
AGAGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAGAGTAACGGAGG
CGCGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTACGAGTGCAAAGGCAGAAGGGA
GCTTGACTGCGAGACCTACCAGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG
TTCCAAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGAT
CTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCAC
CTGTGGCGGTAGTACGTCCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCT
GGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGCGGGCG
■■Homology search results ■■ -
sp_hit_id Q9PLI5
Definition sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum
Align length 79
Score (bit) 89.7
E-value 6.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912174|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_A01.
(467 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 90 6e-18
sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia herm... 33 0.62
sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laev... 31 3.1
sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans (s... 30 4.0
sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolytic... 30 5.2
sp|Q5SZD1|CF141_HUMAN Uncharacterized protein C6orf141 OS=Homo s... 30 5.2
sp|O69979|LEXA_STRCO LexA repressor OS=Streptomyces coelicolor G... 29 8.9
sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1... 29 8.9

>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
muridarum GN=TC_0114 PE=4 SV=2
Length = 122

Score = 89.7 bits (221), Expect = 6e-18
Identities = 45/79 (56%), Positives = 49/79 (62%)
Frame = -3

Query: 465 PAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCXXXXXXXXXX 286
P D D+TVSRR EPSSRTAL+GEQPNPWD+L PQ A SRHRGAKP RR
Sbjct: 44 PTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLLS 103

Query: 285 XXXXXXXERRPFHLEPSDH 229
+RR FH P DH
Sbjct: 104 PEYLLSVKRRRFHFPPPDH 122


>sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia hermsii
GN=vlp18 PE=3 SV=1
Length = 360

Score = 33.1 bits (74), Expect = 0.62
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3

Query: 144 DGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVA 263
+G+Q A A+G+ TA ++ GTK LS+ P AVA
Sbjct: 250 EGDQALGAAADGTTTAMSFAKGGTKDNLSNANTPKAAAVA 289


>sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laevis
GN=clasp1 PE=2 SV=1
Length = 1468

Score = 30.8 bits (68), Expect = 3.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3

Query: 141 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRA 257
+DGN+P+SA + S A T+R G +G + PS A
Sbjct: 247 VDGNRPSSASSSASSKAPQTARRGVSLGTARRPGPSSAA 285


>sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans
(strain Agy99) GN=lexA PE=3 SV=1
Length = 244

Score = 30.4 bits (67), Expect = 4.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3

Query: 99 ASQRVTEARKGFLRLDGNQPTSAKAEG---SLTARPTSRAGTKVGLSDPT 239
A Q T RKG+LR D N+P + G ++TA P + L +PT
Sbjct: 74 AHQLRTLERKGYLRRDPNRPRAVDVRGADDTVTAAPVTDVAGSDALPEPT 123


>sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=lexA PE=3 SV=1
Length = 275

Score = 30.0 bits (66), Expect = 5.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3

Query: 99 ASQRVTEARKGFLRLDGNQPTSAKAEGSLTARPTSRAG 212
A Q + RKGFLR D N+P + + + +A P + AG
Sbjct: 89 AHQLMVLQRKGFLRRDPNRPRAVEIRSAESAVPDASAG 126


>sp|Q5SZD1|CF141_HUMAN Uncharacterized protein C6orf141 OS=Homo
sapiens GN=C6orf141 PE=2 SV=2
Length = 244

Score = 30.0 bits (66), Expect = 5.2
Identities = 23/57 (40%), Positives = 25/57 (43%)
Frame = +2

Query: 269 DKSYSRDNRLIFPKSSHRREGLAPRCRLFATCGGSTSQGLGCSPIKAVRELGSERRE 439
D S S + FP+ R LAP R AT G S SQG G A R LG E
Sbjct: 21 DSSRSLGDLGPFPREVGRGAPLAPGARNPATAGASRSQGGGHEDRTADRALGPRAGE 77


>sp|O69979|LEXA_STRCO LexA repressor OS=Streptomyces coelicolor
GN=lexA PE=3 SV=1
Length = 234

Score = 29.3 bits (64), Expect = 8.9
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3

Query: 99 ASQRVTEARKGFLRLDGNQPTSAKAEGS---LTARPTSRAGTKVGLSDPTVPSGRAVA 263
A Q + RKGFLR D ++P + + GS + +PT AG P V GR A
Sbjct: 68 AHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLV--GRIAA 123


>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1
OS=Homo sapiens GN=HERC1 PE=1 SV=1
Length = 4861

Score = 29.3 bits (64), Expect = 8.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3

Query: 129 LCAPPLLFGRPTPHRNCLPGTVSWS 55
LC PP+ P H+NCLP SW+
Sbjct: 3900 LCNPPV----PPHHQNCLPDPASWN 3920


tr_hit_id Q4EE25
Definition tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858
Align length 109
Score (bit) 179.0
E-value 8.0e-44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912174|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_A01.
(467 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste... 179 8e-44
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin... 179 8e-44
tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil... 161 1e-38
tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin... 157 3e-37
tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost... 148 1e-34
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost... 148 1e-34
tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen... 148 1e-34
tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost... 148 1e-34
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost... 148 1e-34
tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen... 144 2e-33
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost... 144 2e-33
tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost... 143 5e-33
tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost... 141 2e-32
tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo... 141 2e-32
tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost... 139 5e-32
tr|A8R9P5|A8R9P5_9FIRM Putative uncharacterized protein OS=Eubac... 135 1e-30
tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep... 134 3e-30
tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep... 133 5e-30
tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep... 133 5e-30
tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep... 131 2e-29
tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph... 130 3e-29
tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost... 127 4e-28
tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost... 127 4e-28
tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac... 125 1e-27

>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria
monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1
Length = 112

Score = 179 bits (453), Expect = 8e-44
Identities = 88/109 (80%), Positives = 93/109 (85%)
Frame = +3

Query: 141 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 320
+DGN S KA+GSLTAR TSRAGTKVGLSDP VP GRA+AQRIK T GITG S PRVHI
Sbjct: 1 MDGNHSQSVKAQGSLTARLTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHI 60

Query: 321 DGKVWHLDVGSSPPVAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 467
DG+VWHLDVGSS P AVV PKGWAVRPLKR+ SWVQNVVRQFGPYP RA
Sbjct: 61 DGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRA 109


>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein
OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4
SV=1
Length = 109

Score = 179 bits (453), Expect = 8e-44
Identities = 89/109 (81%), Positives = 91/109 (83%)
Frame = +3

Query: 141 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 320
+DGN P SAKAEGSLTA PT AGTKVGLSDP V SG A+AQRIK TLGITG S PRVHI
Sbjct: 1 MDGNHPKSAKAEGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHI 60

Query: 321 DGKVWHLDVGSSPPVAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 467
DG VWHLDVGSS P AVV PKGWAVRPLKRY SWVQNVVRQFGPYP A
Sbjct: 61 DGVVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 109


>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus
megaterium PE=4 SV=1
Length = 95

Score = 161 bits (408), Expect = 1e-38
Identities = 78/92 (84%), Positives = 81/92 (88%)
Frame = +3

Query: 183 LTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDVGSSPP 362
+TAR TSRAGTKVGLSDP VP GRA+AQRIK T GITG S PRVHIDG+VWHLDVGSS P
Sbjct: 1 MTARTTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDVGSSHP 60

Query: 363 VAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYP 458
AVV PKGWAVRPLKRY SWVQNVVRQFGPYP
Sbjct: 61 GAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 92


>tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein
OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04125 PE=4
SV=1
Length = 108

Score = 157 bits (397), Expect = 3e-37
Identities = 79/100 (79%), Positives = 82/100 (82%)
Frame = +3

Query: 168 KAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDV 347
++ GSLTA PT AGTKVGLSDP V SG A+AQRIK TLGITG S PRVHIDG VWHLDV
Sbjct: 9 QSRGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 68

Query: 348 GSSPPVAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 467
GSS P AVV KGWAVRPLKRY SWVQNVVRQFGPYP A
Sbjct: 69 GSSHPGAVVGLKGWAVRPLKRYASWVQNVVRQFGPYPAWA 108


>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein
OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4
SV=1
Length = 213

Score = 148 bits (374), Expect = 1e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = -1

Query: 356 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 177
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 176 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 63
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein
OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4
SV=1
Length = 213

Score = 148 bits (374), Expect = 1e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = -1

Query: 356 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 177
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 176 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 63
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment)
OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4
SV=1
Length = 107

Score = 148 bits (374), Expect = 1e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = -1

Query: 356 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 177
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 176 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 63
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4
SV=1
Length = 210

Score = 148 bits (374), Expect = 1e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = -1

Query: 356 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 177
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 176 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 63
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4
SV=1
Length = 213

Score = 148 bits (374), Expect = 1e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = -1

Query: 356 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 177
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 176 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 63
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum NCTC 2916 GN=CBN_0042 PE=4 SV=1
Length = 218

Score = 144 bits (364), Expect = 2e-33
Identities = 71/98 (72%), Positives = 77/98 (78%)
Frame = -1

Query: 356 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 177
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCMCRSQAP 61

Query: 176 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 63
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYFLGGDRPSQTAHLTMS 99