BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912179|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_A11.
         (549 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BG07|PLD4_MOUSE Phospholipase D4 OS=Mus musculus GN=Pld4 PE...    31   4.5  
sp|Q03570|MED14_CAEEL Mediator of RNA polymerase II transcriptio...    30   5.9  
sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit...    30   7.7  

>sp|Q8BG07|PLD4_MOUSE Phospholipase D4 OS=Mus musculus GN=Pld4 PE=2
           SV=1
          Length = 503

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 473 KYWPALVLNFTLRACAQWKGAHQRLFIIGTFPSEPKL 363
           +YWP  VL+  LRA A  KG H RL +   F ++P +
Sbjct: 351 RYWP--VLDNALRAAALNKGVHVRLLVSCWFNTDPTM 385


>sp|Q03570|MED14_CAEEL Mediator of RNA polymerase II transcription
           subunit 14 OS=Caenorhabditis elegans GN=rgr-1 PE=2 SV=6
          Length = 1516

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 176 SESDDERPEDMLPTLPTTCSA*KLPVNLLL 87
           S+S+DE  ++ LP +P  C    +P+N+LL
Sbjct: 82  SDSEDEPAQNPLPEVPANCGPPTIPLNVLL 111


>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit
           alpha OS=Rhizobium meliloti GN=pdhA PE=3 SV=1
          Length = 348

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 3   LGRGRGMQRAYRGGDQCILCVFGQEASSQKQIDWQFSSGA 122
           LG G      YRG D   L  FG  A++Q Q+   F+  A
Sbjct: 150 LGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAA 189

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912179|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_A11.
         (549 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******