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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912185
Clone id YMU001_000016_B05
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATGAGTAAGTGATCTTTTACGCATCGGTCACATAATCCTTGAATTTTGTCTTCTTCACC
TGTGCTGGTTTCCCCATGTGTTCTTGTGTTTTCTTTCCCTAGATCCTGCATTACAGTCTT
AGAAGTTTTCGGAGCTTTAGGCTGTAATAAAGCTTGAGTAGAGGCTCAACAAGTCTTTTG
TACACTTTCAATCTTTTGGTTTTGTCTTATGGATGCGGATAGGTCAGTAGTGTTTGTTCT
AAAGTTTGGTTGTTATCGAGTCTAGCCGCATAGGATTGCAATATCGTGTCTAGTTGCTCG
TTCACCGTTACAGACTTAGAAGTTTTTGGAGCTTCAGGCTATAATAGGGCTTGAGTAGTC
TCAAAAAGTCTTTTGTACACTTCCAATCTTTTGGTTGTCTTATGGATGCGGATAGGTTAG
TCCTAAAGTTTGGTTATTATTGAGTCTAGCTGCATAGAATTGCAATATCGTGTCTAGTTG
CTTATTCATCTTTTCTACCAAGATTGCTCGTTCATTCTTTCTACCAAGATTG
■■Homology search results ■■ -
sp_hit_id Q59MN0
Definition sp|Q59MN0|VAC8_CANAL Vacuolar protein 8 OS=Candida albicans
Align length 70
Score (bit) 35.4
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912185|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_B05.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q59MN0|VAC8_CANAL Vacuolar protein 8 OS=Candida albicans GN=V...    35   0.17 

>sp|Q59MN0|VAC8_CANAL Vacuolar protein 8 OS=Candida albicans GN=VAC8
           PE=3 SV=3
          Length = 585

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = -2

Query: 237 TNTTDLSASIRQNQKIESVQKTC*ASTQALLQPKAPKTSKTVMQDLGKENTRTHG----E 70
           +N T+++A I++N+ I +  K   AS Q + Q +  +T+ T   ++   NT T+      
Sbjct: 498 SNNTEINALIKENETILAGIKNLSASQQQIQQSQIGQTTTTTTTNITNNNTNTNTNTNTT 557

Query: 69  TSTGEEDKIQ 40
           TST  ED+ +
Sbjct: 558 TSTSNEDQFE 567
tr_hit_id Q1CW29
Definition tr|Q1CW29|Q1CW29_MYXXD CRISPR-associated protein Crm2 OS=Myxococcus xanthus (strain DK 1622)
Align length 41
Score (bit) 33.1
E-value 9.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912185|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_B05.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1CW29|Q1CW29_MYXXD CRISPR-associated protein Crm2 OS=Myxococ...    33   9.0  

>tr|Q1CW29|Q1CW29_MYXXD CRISPR-associated protein Crm2 OS=Myxococcus
           xanthus (strain DK 1622) GN=crm2 PE=4 SV=1
          Length = 596

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = -3

Query: 386 LEVYKRLFETTQALL*PEAPKTSKSVTVNEQLDTILQSYAA 264
           L+ ++R+F+T +++L PEA     SV   EQLDT L+ +AA
Sbjct: 93  LKDWRRVFKTCESMLIPEA-----SVLAEEQLDTFLEIHAA 128