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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912200
Clone id YMU001_000016_C08
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAACATAGAGCCTCTTACCATATACCATGGTGCATGTGGTACAACAGTCTCTTGTTTTGA
AAAATTAGAAGGGGGACCATGGGAACTTCCAGAGGCTGAAGCTTAAAGTTCCTCCCCTTC
AAGTATGAGCTTGCACTATAGACGTTTTAAAAAACAACGCCTCATCTCCCATTGAAGGAG
ATTCCCATAGACCCATTTTTTAATTGGCATAAGTAGTAACACTGACCTTCACTGTCCTTG
GCCAATTCAAGCATTTCTTGCATGTCATACAAGAAACTGCGAGCTCCACGATATTTAACT
TTCTACGCTTAAAGATCAGTGAGTATCACCTAATCGGCATGGCAATCTGCCCATAAGGCC
TCAAAAAATGTAGCACATTATCAGCCTCCATCATGCTTGTTTAAACTACAAAGATCTCAT
GACTTCTTTTCTTTCGAGCAGCTTGAACCTTTCCACCACAACTGGCACGATCTAGGAAAA
AATACTTCTACTAGATTTTGCACCACTCCTTTGTTGTATATGTTGTCTCTTTGAAATTTC
TCTTGGCGTGAGACGACTTTTTTTCTTGGGCA
■■Homology search results ■■ -
sp_hit_id O43613
Definition sp|O43613|OX1R_HUMAN Orexin receptor type 1 OS=Homo sapiens
Align length 47
Score (bit) 30.0
E-value 8.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912200|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_C08.
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O43613|OX1R_HUMAN Orexin receptor type 1 OS=Homo sapiens GN=H...    30   8.5  

>sp|O43613|OX1R_HUMAN Orexin receptor type 1 OS=Homo sapiens
           GN=HCRTR1 PE=1 SV=2
          Length = 425

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +3

Query: 246 FKHFLHVIQETASSTIFNFLRLKISEYHLIGMAICP*GLKKCSTLSA 386
           F H+L      A+  I+NFL  K  E      + C  GL  C +L A
Sbjct: 342 FSHWLVYANSAANPIIYNFLSGKFREQFKAAFSCCLPGLGPCGSLKA 388
tr_hit_id B4FAG9
Definition tr|B4FAG9|B4FAG9_MAIZE Palmitoyltransferase ZDHHC9 OS=Zea mays
Align length 19
Score (bit) 33.9
E-value 6.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912200|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_C08.
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4FAG9|B4FAG9_MAIZE Palmitoyltransferase ZDHHC9 OS=Zea mays P...    34   6.6  

>tr|B4FAG9|B4FAG9_MAIZE Palmitoyltransferase ZDHHC9 OS=Zea mays PE=2
           SV=1
          Length = 406

 Score = 33.9 bits (76), Expect = 6.6
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -1

Query: 533 QRDNIYNKGVVQNLVEVFF 477
           QRDN YNKGV++N+ E+FF
Sbjct: 273 QRDNPYNKGVMENIKEIFF 291