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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912201
Clone id YMU001_000016_C09
Library
Length 447
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TAGCCCAACACCCCCGTTTGCTACTGGCTGTGTCAAGTCACCTTTCCCAGGGTGCAACTC
ATCTTGCCCGCCTGCAAGCTGAGGCCCATAATGTTGCCAAAGCACCATACCTCCCCGCAT
TATGTTTCCCTTGATGTTGCAATGACAACAACCCGAGTTTGCTGCACAGCTGCGAGCTCG
CATGCCTCGAGCTTACCACCTACTACCACGGTAGATACATCATCCACGTTGCGTTCCCAG
GGCTCTATCTGCTATAGGCCCGGGCAAAAATCTTTGGCTTGATTTGTCGGTTACTAGGCC
ATGGAGCTCAAAAGCCCTATTGACCGCCAATTTCTCACTTAAGGAGACAAAAAGTTGCGC
ATCAAGTACTATGAAGCTCTTGAATCCCTCCAGAAGTAGCACAAAACGCAGAAGCCAAAG
CACTACCTTGCAATATGCTAGCTGTGT
■■Homology search results ■■ -
sp_hit_id P15941
Definition sp|P15941|MUC1_HUMAN Mucin-1 OS=Homo sapiens
Align length 54
Score (bit) 31.6
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912201|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_C09.
         (447 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15941|MUC1_HUMAN Mucin-1 OS=Homo sapiens GN=MUC1 PE=1 SV=2         32   1.6  
sp|Q52KB6|C2CD3_MOUSE C2 domain-containing protein 3 OS=Mus musc...    30   3.6  
sp|Q54WX4|AURK_DICDI Probable serine/threonine-protein kinase au...    30   3.6  
sp|Q5N1J7|NUSB_SYNP6 N utilization substance protein B homolog O...    30   4.7  
sp|Q8GIR7|NUSB_SYNE7 N utilization substance protein B homolog O...    30   4.7  
sp|O46598|TIMD1_CERAE Hepatitis A virus cellular receptor 1 OS=C...    30   6.1  
sp|Q4IB89|ATM_GIBZE Serine/threonine-protein kinase TEL1 OS=Gibb...    30   6.1  
sp|Q86I06|NEK3_DICDI Probable serine/threonine-protein kinase ne...    29   8.0  

>sp|P15941|MUC1_HUMAN Mucin-1 OS=Homo sapiens GN=MUC1 PE=1 SV=2
          Length = 1255

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +1

Query: 67   PACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTTTVDTSST 228
            PA K  P  +P HH+        +A  +T+    A+S+H SS+PP T+ + S++
Sbjct: 985  PASKSTPFSIPSHHSD---TPTTLASHSTKT--DASSTHHSSVPPLTSSNHSTS 1033


>sp|Q52KB6|C2CD3_MOUSE C2 domain-containing protein 3 OS=Mus musculus
            GN=C2cd3 PE=2 SV=2
          Length = 2323

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = +1

Query: 49   RVQLILPACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTTTVDTSST 228
            R  L+LP     P+++P     P  +   + M           SH+  LPP  T D   +
Sbjct: 2232 RQTLLLP----EPVVVPNFFLPPQQLEASLRMI----------SHSPGLPPAATTDQDKS 2277

Query: 229  LRSQGSICYRP 261
              ++G++  RP
Sbjct: 2278 EATRGALAQRP 2288


>sp|Q54WX4|AURK_DICDI Probable serine/threonine-protein kinase aurK
           OS=Dictyostelium discoideum GN=aurK PE=1 SV=1
          Length = 384

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 118 HYVSLDVAMTTTRVCCTAA--SSHASSLPPTTTVDTSSTLRSQGS 246
           H  +  V  T T+   T A  S++ S++PPTTT  +SS+  S  S
Sbjct: 39  HQTTSTVKSTITKPTTTGATTSTNTSTIPPTTTASSSSSSSSSSS 83


>sp|Q5N1J7|NUSB_SYNP6 N utilization substance protein B homolog
           OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
           SAUG 1402/1) GN=nusB PE=3 SV=1
          Length = 213

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 354 LFVSLSEKLAVNRAFELHGLVTDKSSQRFLPGPIADRALGTQRG 223
           LF+   E++A+N A EL    +D+  +RF+ G +  R L T  G
Sbjct: 162 LFLGTPEQVAINEAVELANRYSDEEGRRFINGVL--RRLSTMLG 203


>sp|Q8GIR7|NUSB_SYNE7 N utilization substance protein B homolog
           OS=Synechococcus elongatus (strain PCC 7942) GN=nusB
           PE=3 SV=1
          Length = 213

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 354 LFVSLSEKLAVNRAFELHGLVTDKSSQRFLPGPIADRALGTQRG 223
           LF+   E++A+N A EL    +D+  +RF+ G +  R L T  G
Sbjct: 162 LFLGTPEQVAINEAVELANRYSDEEGRRFINGVL--RRLSTMLG 203


>sp|O46598|TIMD1_CERAE Hepatitis A virus cellular receptor 1
           OS=Cercopithecus aethiops GN=HAVCR1 PE=1 SV=2
          Length = 478

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +1

Query: 64  LPACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTTTVDTSSTL 231
           LP     P  LP   T P   ++ + MTTT    T   +  ++LP TTT+ T++TL
Sbjct: 212 LPTTTTLPTTLPTTTTLP--TTMTLPMTTTLPTTTTLPT-TTTLPTTTTLPTTTTL 264


>sp|Q4IB89|ATM_GIBZE Serine/threonine-protein kinase TEL1
           OS=Gibberella zeae GN=TEL1 PE=3 SV=1
          Length = 2813

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +1

Query: 34  QVTFPRVQLILPACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTTTV 213
           Q++F R Q +L AC    ++LP         S  V  T   +   A +S  +S+ PT  V
Sbjct: 684 QISFDRFQSLLSACLAGTLLLPIFGDLNSTQSSSVDSTLKYILDKALNSALTSVEPTAFV 743

Query: 214 DT 219
           D+
Sbjct: 744 DS 745


>sp|Q86I06|NEK3_DICDI Probable serine/threonine-protein kinase nek3
           OS=Dictyostelium discoideum GN=nek3 PE=3 SV=1
          Length = 1123

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +1

Query: 88  IMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSL---PPTTTVDTSSTLRSQGSICYR 258
           ++ PK  T+          TTT    + +SS +SS+   PPTTT  T S  RS  +   +
Sbjct: 494 MITPKRTTTTTTTPTPTTATTTPKKSSLSSSSSSSVKPPPPTTTTTTPSKDRSSVNTINK 553

Query: 259 PGQKSLA 279
           P   +L+
Sbjct: 554 PMASNLS 560
tr_hit_id Q01615
Definition tr|Q01615|Q01615_PNECA Major surface glycoprotein OS=Pneumocystis carinii
Align length 58
Score (bit) 34.7
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912201|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_C09.
         (447 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01615|Q01615_PNECA Major surface glycoprotein OS=Pneumocysti...    35   2.5  
tr|Q54UJ2|Q54UJ2_DICDI RhoGEF domain-containing protein OS=Dicty...    34   3.2  
tr|B6X250|B6X250_9ENTR Putative uncharacterized protein OS=Provi...    33   5.5  
tr|B4MZA8|B4MZA8_DROWI GK18267 OS=Drosophila willistoni GN=GK182...    33   5.5  
tr|Q0C2U3|Q0C2U3_HYPNA Cytochrome c oxidase, cbb3-type, subunit ...    33   7.0  
tr|Q0KA41|Q0KA41_RALEH Inosine-5'-monophosphate dehydrogenase OS...    33   7.2  
tr|Q2RTP9|Q2RTP9_RHORT Permease OS=Rhodospirillum rubrum (strain...    33   9.1  
tr|B6KJ52|B6KJ52_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.4  
tr|A9UTW1|A9UTW1_MONBE Predicted protein OS=Monosiga brevicollis...    33   9.4  
tr|B6QQ90|B6QQ90_PENMA Putative uncharacterized protein OS=Penic...    33   9.4  
tr|A6RDL1|A6RDL1_AJECN Predicted protein OS=Ajellomyces capsulat...    33   9.4  

>tr|Q01615|Q01615_PNECA Major surface glycoprotein OS=Pneumocystis
           carinii PE=2 SV=1
          Length = 202

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +1

Query: 73  CKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTTTVDTSSTLRSQGS 246
           CKL P+ +  HHT       +++ TTT    T  ++  ++   TTT  T++T   QGS
Sbjct: 55  CKLEPLEIKPHHTE---TQKEISTTTT----TTTTTTTTTTTTTTTTTTTTTTTKQGS 105


>tr|Q54UJ2|Q54UJ2_DICDI RhoGEF domain-containing protein
           OS=Dictyostelium discoideum GN=gxcEE PE=4 SV=1
          Length = 651

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = +1

Query: 4   PNTPVCYWLCQVTFPRVQLILPACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSH 183
           P  P  Y L  +T   +QL  P+  L+P + P  H+SP    + +   +     TA ++ 
Sbjct: 447 PLKPTNYPLQTITNTEIQLS-PSSSLKPPLSPLRHSSPFSEKVLIEKLSINSSTTATTAI 505

Query: 184 ASSLPPTTTVDTSS 225
           A++   TTT  T+S
Sbjct: 506 ATTATATTTTTTTS 519


>tr|B6X250|B6X250_9ENTR Putative uncharacterized protein
           OS=Providencia rustigianii DSM 4541 GN=PROVRUST_01282
           PE=4 SV=1
          Length = 299

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  CQVTFPRVQLILPACKL-RPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTT 207
           C +  P +  +LP+C +  P+ L     + + V+ ++A     + CT   S      P  
Sbjct: 175 CSIHVPEIP-VLPSCDIFMPLTLSHGEVNANNVNGNIAKVNGDITCTGDMSATFQFLPEN 233

Query: 208 TVDTSSTLRSQGSIC 252
            VD S  ++SQ  +C
Sbjct: 234 EVDLSQGVKSQLDVC 248


>tr|B4MZA8|B4MZA8_DROWI GK18267 OS=Drosophila willistoni GN=GK18267
           PE=4 SV=1
          Length = 712

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +1

Query: 109 TSPHYVSLDVAMTTTRVCCT-AASSHASSLPPTTTVDTSSTLRSQGS 246
           TS    +L  A T T V  T AA++ AS+  PTT++ TSS+ RSQ S
Sbjct: 585 TSIASTALTSATTATTVTTTTAAAASASATNPTTSLSTSSSSRSQSS 631


>tr|Q0C2U3|Q0C2U3_HYPNA Cytochrome c oxidase, cbb3-type, subunit I
           OS=Hyphomonas neptunium (strain ATCC 15444) GN=ccoN PE=3
           SV=1
          Length = 559

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +3

Query: 174 ELACLELTTYYHGRYIIHVAFPGLYLL*ARAKIFGLICRLLGHGAQK 314
           E + +E     H  YII VA  GL+LL A    + L+   LGHGA +
Sbjct: 494 EYSFIETVKAKHIMYIIRVAGGGLFLLGAILMAYNLVRTALGHGAAR 540


>tr|Q0KA41|Q0KA41_RALEH Inosine-5'-monophosphate dehydrogenase
           OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428
           / Stanier 337) GN=guaB PE=4 SV=1
          Length = 487

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 342 LSEKLAVNRAFELHGLVTDKSSQRFLPGPIADR 244
           L   L VN+AFEL GL+T K  Q+ +  P+A +
Sbjct: 178 LERVLVVNQAFELRGLITVKDIQKAVDNPLASK 210


>tr|Q2RTP9|Q2RTP9_RHORT Permease OS=Rhodospirillum rubrum (strain
           ATCC 11170 / NCIB 8255) GN=Rru_A1696 PE=4 SV=1
          Length = 180

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 207 HGRYIIHVAFPGLYLL*AR-AKIFGLICRLLGHGAQKP 317
           HGR +IH A  GL+L+ A  A IFG++   LG   Q P
Sbjct: 122 HGRMMIHAALVGLFLIVAHIAMIFGMLDPTLGGAWQAP 159


>tr|B6KJ52|B6KJ52_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii ME49 GN=TGME49_029310 PE=4 SV=1
          Length = 4303

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +1

Query: 55   QLILPACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTTTVDTSSTLR 234
            +L   AC   P  LP  H++PH  +L V+ +T  +     + H  SL P ++  +SS+  
Sbjct: 1932 RLASSACSEPPNALPSFHSAPHSRTLSVSCSTAPL---VPAPHLVSLTPASSSPSSSSSP 1988

Query: 235  SQGS 246
            S  S
Sbjct: 1989 SSAS 1992


>tr|A9UTW1|A9UTW1_MONBE Predicted protein OS=Monosiga brevicollis
           GN=23588 PE=4 SV=1
          Length = 874

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 25/79 (31%), Positives = 34/79 (43%)
 Frame = +1

Query: 28  LCQVTFPRVQLILPACKLRPIMLPKHHTSPHYVSLDVAMTTTRVCCTAASSHASSLPPTT 207
           L   T PR   + P     P+M PK  + P         TTT V  T  ++  + +P TT
Sbjct: 182 LAVCTSPR-SFLPPRLPRPPMMPPKFFSGPS----GQIPTTTPVPTTTTTTTTTRVPTTT 236

Query: 208 TVDTSSTLRSQGSICYRPG 264
           T  T+  L +  S   RPG
Sbjct: 237 TTTTTRPLTTTSSTTTRPG 255


>tr|B6QQ90|B6QQ90_PENMA Putative uncharacterized protein
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_040920 PE=4
           SV=1
          Length = 229

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 88  IMLPKHHTSPHYVSL---DVAMTTTRVCCTAASSHASSLPPTTTVDTSST 228
           ++LP  +  P+  S+   D A TT  V C + S+H   +P  T V  S T
Sbjct: 22  MLLPNINVEPYAASIVNEDTAATTYAVSCGSGSNHCGGMPAFTAVQGSET 71