BP912203
Clone id YMU001_000016_C11
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTGAAAAAATATGCGCGCATCAACTACCAGTAGAAAGCAAATTGACTCTTAACAAT
AATACATTGAGCATTCTTAGGATGTCAGCTCAATGGCATCTATAACTGTTCGCCTCGCAG
GTAAGGGACAGCTACAATCGACCATCTCACAGCCAGCGGCGGCAACCCTCGTCGCCAGGG
CAATGCTAATAAATAAGATGGACATGGTCCAAACAGTGCTGCTAGCTTTGAAGTAAAGTA
AATCCAGAGGTGCCCAAATGAAGCTAATCCTGCAAGAGGAAGCCAAAGTCCCCATTGTAA
GACCTCTGCTCACTAAATGTGAATACCAATCATTTTCAGTAGAATTAAGCGCATCCCTAT
ACCAATCAATATTCAGGCACTGATCTTCCAAGGGTAATGTCCAGAAGAGATGCTCATGTG
AGACAAAATTATCATTGCTCGATAGCTACAAGTCTTCAAAGAAAAGATAAACGACGCCTT
TGAAGATATTACCAATCTGTAGCTTCCCATTAGAAAAATTACCAATCCGAAGC
■■Homology search results ■■ -
sp_hit_id Q88DN4
Definition sp|Q88DN4|LNT_PSEPK Apolipoprotein N-acyltransferase OS=Pseudomonas putida (strain KT2440)
Align length 64
Score (bit) 30.8
E-value 4.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912203|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_C11.
(533 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q88DN4|LNT_PSEPK Apolipoprotein N-acyltransferase OS=Pseudomo... 31 4.3
sp|Q9VQE9|TMTC1_DROME Transmembrane and TPR repeat-containing pr... 30 9.5
sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gal... 30 9.5

>sp|Q88DN4|LNT_PSEPK Apolipoprotein N-acyltransferase OS=Pseudomonas
putida (strain KT2440) GN=lnt PE=3 SV=1
Length = 505

Score = 30.8 bits (68), Expect = 4.3
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
Frame = -3

Query: 279 PLAGLASFGHLW-IYFTSKLAAL-------FGPCPSY------LLALPWRRGLPPLAVRW 142
PLAGLA G +W I FT L A P PS+ LL PW GL W
Sbjct: 158 PLAGLAPLGGVWLISFTLALTAALLCNLHRLRPRPSFLAVASVLLLAPWGLGLALKGHAW 217

Query: 141 SIVA 130
+I A
Sbjct: 218 TIPA 221


>sp|Q9VQE9|TMTC1_DROME Transmembrane and TPR repeat-containing
protein CG31690 OS=Drosophila melanogaster GN=CG31690
PE=2 SV=2
Length = 849

Score = 29.6 bits (65), Expect = 9.5
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Frame = -2

Query: 442 SSNDNFVSHEHLFWT-------LPLED-------QCLNIDWYRDALNSTENDWYSHLVSR 305
S+ DN +HE FWT LP+ + Q L+ DW +A++ W + +
Sbjct: 263 SAADNPTAHESCFWTRTLTFLYLPVANFGILLWPQELSFDWGMEAVSRIRTLWDARNI-- 320

Query: 304 GLTMGTLASSCRISFIWAPLDLLYFKASSTVWTMSILFISIALATRVAAAGCEM---VDC 134
LT G S ++ +W L A+S + + IS+ L R+ C + C
Sbjct: 321 -LTAGFYGS--LVAILWKGSGLR--SAASPMDFAEVANISLPLLRRLGGNSCHTWLGLTC 375

Query: 133 SC 128
C
Sbjct: 376 DC 377


>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus
gallus GN=SORL1 PE=2 SV=1
Length = 1592

Score = 29.6 bits (65), Expect = 9.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1

Query: 182 CPGDEGCRRWL*DGRL*LSLTCEANSYRC 96
C D CR W + + TCEA+S++C
Sbjct: 1084 CDDDNDCRDWSDEANCTMFRTCEASSFQC 1112


tr_hit_id A7QFQ4
Definition tr|A7QFQ4|A7QFQ4_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera
Align length 68
Score (bit) 36.2
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912203|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_C11.
(533 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QFQ4|A7QFQ4_VITVI Chromosome chr8 scaffold_88, whole genome... 36 1.1
tr|Q6MLJ0|Q6MLJ0_BDEBA Solute carrier family 39 (Iron-regulated ... 29 2.0
tr|A1T3B4|A1T3B4_MYCVP ROK family protein OS=Mycobacterium vanba... 35 3.2
tr|A4T325|A4T325_MYCGI ROK family protein OS=Mycobacterium gilvu... 34 5.4
tr|A8ICT0|A8ICT0_AZOC5 ABC type hydroxamate-dependent iron uptak... 33 7.0
tr|B4LUT7|B4LUT7_DROVI GJ17375 OS=Drosophila virilis GN=GJ17375 ... 33 9.2

>tr|A7QFQ4|A7QFQ4_VITVI Chromosome chr8 scaffold_88, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037510001
PE=4 SV=1
Length = 501

Score = 36.2 bits (82), Expect = 1.1
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = -3

Query: 306 EVLQWGLWLPLAGLASFGHLWIYFTSKLAALFGPCPSYLLALPWRRGLPPLAVRWSIVAV 127
E+ +WG+ L AGL WIY T++ L G SYLLA P + GL L R ++
Sbjct: 86 EMEKWGI-LVFAGLT-----WIYLTARPGVLMGAIDSYLLA-PLQLGLDSLTGRRNLKRT 138

Query: 126 PYLRGEQL 103
++ G +L
Sbjct: 139 DFVVGNRL 146


>tr|Q6MLJ0|Q6MLJ0_BDEBA Solute carrier family 39 (Iron-regulated
transporter) OS=Bdellovibrio bacteriovorus GN=slc39 PE=4
SV=1
Length = 440

Score = 28.9 bits (63), Expect(2) = 2.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2

Query: 247 LDLLYFKASSTVWTMSILFISIALATRVAAAGCEMVDCS 131
LD L W +S+LFI++AL+ +A+ G ++ D S
Sbjct: 98 LDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDIS 136



Score = 25.0 bits (53), Expect(2) = 2.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
Frame = -3

Query: 306 EVLQWGLWLP----LAGLASFGHL 247
+V++WG+WL LAG+ FG L
Sbjct: 75 QVVKWGVWLQFFAILAGMVFFGML 98


>tr|A1T3B4|A1T3B4_MYCVP ROK family protein OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0826 PE=4
SV=1
Length = 437

Score = 34.7 bits (78), Expect = 3.2
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3

Query: 84 VSSMASITVRLAGKGQLQSTISQPAAATLVARAMLINKMDMVQTVLLALK*SKSRGAQMK 263
++++ + + L G GQL+ST+S A T +A ++ TV L+ ++ A
Sbjct: 280 IAALPAFSELLGGTGQLESTVSDEAVLTAARKAGIVAAEGPTSTVTAVLRAARQGNAAAA 339

Query: 264 LILQEEAKV 290
++ E A+V
Sbjct: 340 ALVAERARV 348


>tr|A4T325|A4T325_MYCGI ROK family protein OS=Mycobacterium gilvum
(strain PYR-GCK) GN=Mflv_0087 PE=4 SV=1
Length = 440

Score = 33.9 bits (76), Expect = 5.4
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3

Query: 90 SMASITVR---LAGKGQLQSTISQPAAATLVARAMLINKMDMVQTVLLALK*SKSRGAQM 260
++AS+ VR L G GQL+ST+S A T RA ++ TV L+ ++
Sbjct: 274 TIASLPVRSELLGGTGQLESTVSDEAVLTAARRAGVVPADGPASTVTAVLRAARQGDEHA 333

Query: 261 KLILQEEAKV 290
++ E A+V
Sbjct: 334 VALIAERARV 343


>tr|A8ICT0|A8ICT0_AZOC5 ABC type hydroxamate-dependent iron uptake
duplicated permease OS=Azorhizobium caulinodans (strain
ATCC 43989 / DSM 5975 / ORS 571) GN=AZC_3249 PE=4 SV=1
Length = 651

Score = 33.5 bits (75), Expect = 7.0
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3

Query: 288 LWLPLAGLASFGHLWIYFTSKLAALFGPCPSYLLALPWRRGLPPLAV 148
LW P GL +FG W+ A+ S + AL W +GL PLAV
Sbjct: 98 LWAP--GLFTFGREWVALAGGAIAV-----SLVFALSWHKGLSPLAV 137


>tr|B4LUT7|B4LUT7_DROVI GJ17375 OS=Drosophila virilis GN=GJ17375
PE=4 SV=1
Length = 865

Score = 33.1 bits (74), Expect = 9.2
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Frame = -2

Query: 442 SSNDNFVSHEHLFWT--------------LPLEDQCLNIDWYRDALNSTENDWYS-HLVS 308
S+ DN +HE +WT L L Q L+ DW DA+ W + ++VS
Sbjct: 268 SAADNPTAHESCWWTRTLSYLYLPVVNLKLLLWPQYLSFDWGMDAIPRIRTLWDARNIVS 327

Query: 307 RGLTMGTLASSCRISFIWAPLDLLYFKASSTVWTMSILFISIALATRVAAAGCEM---VD 137
+ LA SC+ L L +SS+ ++ IS+ L R+ C+ +
Sbjct: 328 ACFYVTLLAVSCKC------LRLRCGASSSSTAYTAVASISLPLLQRLGGNSCQAWHGLV 381

Query: 136 CSC 128
C C
Sbjct: 382 CGC 384