BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912204|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_D01.
         (454 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q03271|PO13_NASVI Retrovirus-related Pol polyprotein from typ...    31   2.2  
sp|O73590|ZFHX4_CHICK Zinc finger homeobox protein 4 OS=Gallus g...    30   6.3  

>sp|Q03271|PO13_NASVI Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R1 3 (Fragment) OS=Nasonia
           vitripennis PE=4 SV=1
          Length = 383

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
 Frame = -3

Query: 422 FARSIEPSPA----SERQSWIYVLAKCTMSVVF 336
           F+R++  SPA    +ER+ WI+VL +C M   F
Sbjct: 297 FSRNLSNSPACACGTEREDWIHVLCECDMYAAF 329


>sp|O73590|ZFHX4_CHICK Zinc finger homeobox protein 4 OS=Gallus
           gallus GN=ZFHX4 PE=2 SV=2
          Length = 3573

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = -3

Query: 221 ALCFYFTSDTFEAPSRVHWSFEALLPCGKW 132
           A+C  FTSD+ EA S VH S E LLP  +W
Sbjct: 877 AVCNKFTSDSLEALS-VHVSSERLLPEEEW 905

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912204|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_D01.
         (454 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2SSD3|A2SSD3_METLZ Sodium:dicarboxylate symporter OS=Methano...    33   7.1  

>tr|A2SSD3|A2SSD3_METLZ Sodium:dicarboxylate symporter
           OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM
           4855 / Z) GN=Mlab_1070 PE=4 SV=1
          Length = 535

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 254 FTIEGNESTIFALCFYFTSDTFEAPSRVHWSFEALLPCGKWFLA 123
           F+  G+ +  F +C  F +DT+  P    W F A+L CG   LA
Sbjct: 424 FSRPGHAAVFFCVCL-FMADTYGVPITFSWIFAAILTCGLLALA 466