BP912214
Clone id YMU001_000016_E02
Library
Length 416
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGGTTTGGGGCCAATACTCTCTGAGGTGGAATTCCGTCACTCCGTGTCGCGTGTCGTCT
CTCTCTCTCAGTTATGTTTTTATTGAAGTGACAAAAGTCTGTTCAGTCTGTTCTTTCTAT
TGGCACGTGTTCTTTTCTATTGGCACGTGGTGCACGTCTTGTGACAGCGTCTTGTGACAG
ATCCCCACAAATTAGGGTGTCTCCTAGAAACTGCATAGGCTCCTTAAACCCAAGGGTGCC
CCTAAGCATGATAGGAATGCTCCTATGAGGCCTCCAAGAGTCACCTTAGAGAATCTCTCA
CGTAGGTAATCTCTTCCAACTTTCCAAAGAAGGGTGTGTGCTCACAGACCCCAACTGTGC
TCTGATAATCTATGCAGACCAGACTTTATATGTCGAAGCATGCCAATTTTCTGTCT
■■Homology search results ■■ -
sp_hit_id P01523
Definition sp|P01523|CXM3A_CONGE Mu-conotoxin GIIIA OS=Conus geographus
Align length 59
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912214|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_E02.
(416 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P01523|CXM3A_CONGE Mu-conotoxin GIIIA OS=Conus geographus PE=... 29 6.4
sp|Q98SJ5|SIM1_DANRE Single-minded homolog 1 OS=Danio rerio GN=s... 29 8.4
sp|Q9BPQ5|PIGM_TRYBB GPI mannosyltransferase 1 OS=Trypanosoma br... 29 8.4
sp|A6NIJ5|F90AK_HUMAN Putative protein FAM90A20 OS=Homo sapiens ... 29 8.4

>sp|P01523|CXM3A_CONGE Mu-conotoxin GIIIA OS=Conus geographus PE=1
SV=2
Length = 74

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1

Query: 220 LLKPKGAPKHDRNAPMRPPRVTLENLSRR*SLPTFQ-RRVCAHRPQLCSDNLCRPDFIC 393
LL P A D + P P +++ P F+ RR C P+ C D C+P C
Sbjct: 13 LLFPLTALPMDGDEPANRPVERMQDNISSEQYPLFEKRRDCCTPPKKCKDRQCKPQRCC 71


>sp|Q98SJ5|SIM1_DANRE Single-minded homolog 1 OS=Danio rerio GN=sim1
PE=2 SV=1
Length = 745

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3

Query: 312 SSNFPKKGVCSQTPTVL**SMQTRLYMSKHANF 410
SS P G C+ +PT S+ R Y+ KHA +
Sbjct: 658 SSQLPLTGTCAVSPTPALYSLHPRQYLEKHAAY 690


>sp|Q9BPQ5|PIGM_TRYBB GPI mannosyltransferase 1 OS=Trypanosoma
brucei brucei GN=PIGM PE=2 SV=2
Length = 430

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1

Query: 16 YSLRWNSVTPCRVSSLSLSYVFIEVTKVCSVCSFYWHVFFSIGTWC 153
Y LR N+ C V ++ +F+ KVC+V F W + F +C
Sbjct: 295 YKLRRNTAHACCVQTV----LFVAFNKVCTVQYFVWFIPFLAFLFC 336


>sp|A6NIJ5|F90AK_HUMAN Putative protein FAM90A20 OS=Homo sapiens
GN=FAM90A20 PE=3 SV=1
Length = 464

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1

Query: 223 LKPKGAPKHDRNAPMRPPRVTLENLSRR*SLPTFQRRVCAHRPQLCSD 366
L P +P+ R P + P V + RR LPT Q +H P D
Sbjct: 340 LGPSRSPQMGRRTPAQVPSVERQPPHRRPCLPTAQACTMSHHPAASHD 387


tr_hit_id Q6PY98
Definition tr|Q6PY98|Q6PY98_9ARAC NADH-ubiquinone oxidoreductase chain 1 OS=Habronattus oregonensis
Align length 37
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912214|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_E02.
(416 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6PY98|Q6PY98_9ARAC NADH-ubiquinone oxidoreductase chain 1 OS... 33 7.1

>tr|Q6PY98|Q6PY98_9ARAC NADH-ubiquinone oxidoreductase chain 1
OS=Habronattus oregonensis GN=ND1 PE=3 SV=1
Length = 306

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1

Query: 52 VSSLSLSYVFIEVTKVCSVCSFYWHVFFSIGTWCTSC 162
+S LS SY F E++ ++ SF+W W TSC
Sbjct: 155 ISILSYSYSFYEISNSQNIMSFFWGNMILFFMWITSC 191