BP912218 |
Clone id |
YMU001_000016_E06 |
Library |
YMU01 |
Length |
533 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000016_E06. |
Accession |
BP912218 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCCGCACTCTTGAAATAACTGTCACAGATATTACGCTCAGGAACATCCACTTCAATGTCA AGAAAGGAGATTCTCTTATTCCGCAGGTCTTTCTTGACCTATCTCTTGATGTTCGCCTCC GAGCCCGGAACCCTAATTTCTTCGGTGTTACTTATGAGAATGTCACAGTGAGCATCTTGT TTGAAGGTGATGAGATTGCCCAGGTAGAGTCTTATGGAGCCAAGCTTGATGCCCTCAGCA CCTCTTATGCTGATGCCACTCTTGAACTTCACAGCTATTGCATTGCCAGTAATGTGCTTA AGCTGCTTGCTGACGTAGCAAATAAAGCATTGCCCTTGCAGACCATCACAATGTGCAGGG GCAATATCAATTTATACATTCTTAAACTTCCACTGGAGGGCAAGGTTACATGCAATCTCG TGGTCAATCCACAGGACCAGCTCATAATCAGTCAAGATTGTCTATGAAGGAAAATCAATT AGCCTCCAATAGATAACTAACTCTGGAAATCATATTTCTTGTACAGGAAAAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5BK83 |
Definition |
sp|Q5BK83|T106A_RAT Transmembrane protein 106A OS=Rattus norvegicus |
Align length |
118 |
Score (bit) |
36.6 |
E-value |
0.072 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9THR3 |
Definition |
tr|A9THR3|A9THR3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
151 |
Score (bit) |
109.0 |
E-value |
9.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912218|Adiantum capillus-veneris mRNA, clone: YMU001_000016_E06. (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9THR3|A9THR3_PHYPA Predicted protein OS=Physcomitrella paten... 109 9e-23 tr|A9NPF0|A9NPF0_PICSI Putative uncharacterized protein OS=Picea... 109 9e-23 tr|Q52K84|Q52K84_ARATH At4g13270 OS=Arabidopsis thaliana PE=2 SV=1 103 7e-21 tr|Q0WT23|Q0WT23_ARATH Putative uncharacterized protein At4g1327... 103 7e-21 tr|A9NMX5|A9NMX5_PICSI Putative uncharacterized protein OS=Picea... 102 9e-21 tr|A7PER2|A7PER2_VITVI Chromosome chr11 scaffold_13, whole genom... 101 2e-20 tr|A9NS41|A9NS41_PICSI Putative uncharacterized protein OS=Picea... 99 2e-19 tr|Q10EQ8|Q10EQ8_ORYSJ Os03g0696000 protein OS=Oryza sativa subs... 94 3e-18 tr|B6TA41|B6TA41_MAIZE Putative uncharacterized protein OS=Zea m... 92 1e-17 tr|A7P7D4|A7P7D4_VITVI Chromosome chr9 scaffold_7, whole genome ... 90 8e-17 tr|Q9T0J8|Q9T0J8_ARATH Putative uncharacterized protein AT4g1327... 81 4e-14 tr|A5B8V3|A5B8V3_VITVI Putative uncharacterized protein OS=Vitis... 75 3e-12 tr|Q9C825|Q9C825_ARATH Putative uncharacterized protein F19K6.6 ... 73 1e-11 tr|B6TUA9|B6TUA9_MAIZE Putative uncharacterized protein OS=Zea m... 70 5e-11 tr|B4FKK7|B4FKK7_MAIZE Putative uncharacterized protein OS=Zea m... 70 5e-11 tr|B6TPQ4|B6TPQ4_MAIZE Putative uncharacterized protein OS=Zea m... 70 6e-11 tr|A9RWR5|A9RWR5_PHYPA Predicted protein OS=Physcomitrella paten... 70 6e-11 tr|Q9M386|Q9M386_ARATH Putative uncharacterized protein F24B22.1... 61 4e-08 tr|Q1STP6|Q1STP6_MEDTR Harpin-induced 1 OS=Medicago truncatula G... 61 4e-08 tr|A5BBS3|A5BBS3_VITVI Putative uncharacterized protein OS=Vitis... 59 1e-07 tr|Q8LE22|Q8LE22_ARATH Putative uncharacterized protein OS=Arabi... 59 1e-07 tr|Q5BPW9|Q5BPW9_ARATH Putative uncharacterized protein (Express... 56 9e-07 tr|A7PZK6|A7PZK6_VITVI Chromosome chr15 scaffold_40, whole genom... 56 1e-06 tr|A5CBV1|A5CBV1_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06 tr|A9TE39|A9TE39_PHYPA Predicted protein OS=Physcomitrella paten... 54 5e-06 tr|A3BKH1|A3BKH1_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|B8LPI4|B8LPI4_PICSI Putative uncharacterized protein OS=Picea... 52 2e-05 tr|B8B8A2|B8B8A2_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|A9TI16|A9TI16_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05 tr|Q6ZIX1|Q6ZIX1_ORYSJ Os07g0206800 protein OS=Oryza sativa subs... 51 3e-05
>tr|A9THR3|A9THR3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170139 PE=4 SV=1 Length = 220
Score = 109 bits (272), Expect = 9e-23 Identities = 54/151 (35%), Positives = 95/151 (62%) Frame = +3
Query: 9 LEITVTDITLRNIHFNVKKGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEG 188 L++ + L I K+ S++P L++SL+V + +NPN+ GV Y+NVT+ I++ G Sbjct: 68 LDVQAKEWKLNGISIVTKETKSILPSYQLNVSLNVLVEIKNPNYAGVVYDNVTLRIVYRG 127
Query: 189 DEIAQVESYGAKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNI 368 D++ QV++ G+++ ST+ AT+ L I S+ +L+ D ++ LPL T T G++ Sbjct: 128 DDLGQVKAEGSRIKPRSTANLTATVNLKGNEILSDAKQLMEDYSDGKLPLTTYTAFDGSV 187
Query: 369 NLYILKLPLEGKVTCNLVVNPQDQLIISQDC 461 L+ +K L V C+LV+NP+D++I+SQ+C Sbjct: 188 QLWFVKPLLNVTVACDLVLNPEDKIILSQEC 218
>tr|A9NPF0|A9NPF0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 227
Score = 109 bits (272), Expect = 9e-23 Identities = 53/150 (35%), Positives = 93/150 (62%), Gaps = 1/150 (0%) Frame = +3
Query: 15 ITVTDITLRNIHFNVK-KGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGD 191 I V + I+F + S++P++F+++S+D+ L+ N ++F + Y+++ V + + G Sbjct: 75 IQVIGVNFNTINFQAAPQPGSVVPRLFMNISMDMALKVNNKDYFSLEYDSLDVGLGYRGR 134
Query: 192 EIAQVESYGAKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNIN 371 I VES G +L A T+Y ++TLEL I + + LL D+ K LPL T+ G++ Sbjct: 135 RIGVVESEGGRLPARHTAYVNSTLELDGVEIFHDTVYLLEDLVRKELPLDTVAEFNGSVR 194
Query: 372 LYILKLPLEGKVTCNLVVNPQDQLIISQDC 461 + ++K+PL+ V+C +VVNP +Q I+SQDC Sbjct: 195 VLLVKVPLKKVVSCEVVVNPDNQTILSQDC 224
>tr|Q52K84|Q52K84_ARATH At4g13270 OS=Arabidopsis thaliana PE=2 SV=1 Length = 215
Score = 103 bits (256), Expect = 7e-21 Identities = 54/146 (36%), Positives = 88/146 (60%), Gaps = 1/146 (0%) Frame = +3
Query: 27 DITLRNIHFN-VKKGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGDEIAQ 203 DIT+ I+ N + DS ++ LDLS + ++ RN +FF + Y+++ VSI + G E+ Sbjct: 69 DITVSRINLNHISVVDS--HKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGL 126
Query: 204 VESYGAKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNINLYIL 383 V+S G L A +SY DATLEL + +V+ L+ D+A +P TI +G++ + + Sbjct: 127 VKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVLLF 186
Query: 384 KLPLEGKVTCNLVVNPQDQLIISQDC 461 +P++GKV+C + VN +Q I QDC Sbjct: 187 NIPIQGKVSCEVYVNVNNQKISHQDC 212
>tr|Q0WT23|Q0WT23_ARATH Putative uncharacterized protein At4g13270 (Fragment) OS=Arabidopsis thaliana GN=At4g13270 PE=2 SV=1 Length = 213
Score = 103 bits (256), Expect = 7e-21 Identities = 54/146 (36%), Positives = 88/146 (60%), Gaps = 1/146 (0%) Frame = +3
Query: 27 DITLRNIHFN-VKKGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGDEIAQ 203 DIT+ I+ N + DS ++ LDLS + ++ RN +FF + Y+++ VSI + G E+ Sbjct: 67 DITVSRINLNHISVVDS--HKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGL 124
Query: 204 VESYGAKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNINLYIL 383 V+S G L A +SY DATLEL + +V+ L+ D+A +P TI +G++ + + Sbjct: 125 VKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVLLF 184
Query: 384 KLPLEGKVTCNLVVNPQDQLIISQDC 461 +P++GKV+C + VN +Q I QDC Sbjct: 185 NIPIQGKVSCEVYVNVNNQKISHQDC 210
>tr|A9NMX5|A9NMX5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 152
Score = 102 bits (255), Expect = 9e-21 Identities = 50/135 (37%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Frame = +3
Query: 60 KKGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGDEIAQVESYG-AKLDAL 236 K S +P+VFLDL++ + ++ N ++ GV Y++V V I + G++I QV S A + Sbjct: 12 KSPGSFLPRVFLDLNMGLTVKVTNRDYLGVYYDHVKVGIAYRGEKIGQVTSENSAYIPPR 71
Query: 237 STSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNINLYILKLPLEGKVTCN 416 T+Y DATL++H + ++V+ LL D+A +PLQT+T G I L+ LK+PL+ ++C Sbjct: 72 GTAYVDATLDIHGIQVLADVIYLLEDIARGRIPLQTVTDFDGYIRLFSLKVPLQAIMSCE 131
Query: 417 LVVNPQDQLIISQDC 461 + V+ +Q ++ Q+C Sbjct: 132 VDVDTNEQTVLRQEC 146
>tr|A7PER2|A7PER2_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016757001 PE=4 SV=1 Length = 218
Score = 101 bits (252), Expect = 2e-20 Identities = 49/127 (38%), Positives = 78/127 (61%) Frame = +3
Query: 81 PQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGDEIAQVESYGAKLDALSTSYADAT 260 P + LDLSLD+ +R RN +FF +Y ++T S+ + G + V S G L A +SY +AT Sbjct: 83 PVISLDLSLDLTIRVRNRDFFSFSYTSLTASVGYRGRRLGFVNSSGGYLRARGSSYINAT 142
Query: 261 LELHSYCIASNVLKLLADVANKALPLQTITMCRGNINLYILKLPLEGKVTCNLVVNPQDQ 440 L+L + +V LL D+A ++P T++ RG + L+ ++PL+ +V+C + VN +Q Sbjct: 143 LDLDGIEVLHDVFYLLEDLARGSIPFDTVSEVRGKLGLFFFEIPLKARVSCEVYVNTSNQ 202
Query: 441 LIISQDC 461 II QDC Sbjct: 203 TIIHQDC 209
>tr|A9NS41|A9NS41_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 98.6 bits (244), Expect = 2e-19 Identities = 52/151 (34%), Positives = 93/151 (61%), Gaps = 2/151 (1%) Frame = +3
Query: 15 ITVTDITLRNIHFNVKK-GDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGD 191 I V + L I + +K S +P+VFL+LS+++ ++ N ++ GV Y++V V I + G+ Sbjct: 77 IEVVRMGLNKIEWRPEKFPGSFLPRVFLNLSMELTVKVTNKDYLGVYYDHVNVGIAYRGE 136
Query: 192 EIAQVESYG-AKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNI 368 +I +V S A + T+Y DATL++ + ++V+ LL D+A +PLQT+T G I Sbjct: 137 KIGRVTSENSAYIPPRGTAYVDATLDIDGIQVLADVIYLLEDIARGHIPLQTVTDFDGYI 196
Query: 369 NLYILKLPLEGKVTCNLVVNPQDQLIISQDC 461 L+ LK+PL+ ++C + V+ +Q ++ Q+C Sbjct: 197 RLFSLKVPLQAIMSCEVDVDTNEQTVLRQEC 227
>tr|Q10EQ8|Q10EQ8_ORYSJ Os03g0696000 protein OS=Oryza sativa subsp. japonica GN=Os03g0696000 PE=2 SV=1 Length = 226
Score = 94.4 bits (233), Expect = 3e-18 Identities = 46/142 (32%), Positives = 82/142 (57%) Frame = +3
Query: 36 LRNIHFNVKKGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGDEIAQVESY 215 LR H +V S P V + +S +++R RNP+ F + Y + V I + G + +V S Sbjct: 86 LRLAHVSV----SARPTVRVTISAALKVRVRNPDLFALDYGRLDVDIGYRGAPLGRVTSG 141
Query: 216 GAKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNINLYILKLPL 395 G ++ A + SY DA L L + + + LL D+A ++P T+ G+++L+ L +P+ Sbjct: 142 GGRVRARAVSYIDANLSLDGISVVEDAIYLLEDLARGSVPFDTVAEVEGHVHLFFLSIPV 201
Query: 396 EGKVTCNLVVNPQDQLIISQDC 461 +G+++C + +NP +Q I+ QDC Sbjct: 202 KGRISCVVHINPHNQTIVHQDC 223
>tr|B6TA41|B6TA41_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 227
Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/127 (32%), Positives = 76/127 (59%) Frame = +3
Query: 81 PQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGDEIAQVESYGAKLDALSTSYADAT 260 P V + +S +++R RNP+ F + Y + V+I + G + +V S G ++ A + SY DA Sbjct: 98 PAVAVTISATLKVRVRNPDLFALDYTRLDVAIGYRGAGLGRVTSGGGRVRARAVSYVDAN 157
Query: 261 LELHSYCIASNVLKLLADVANKALPLQTITMCRGNINLYILKLPLEGKVTCNLVVNPQDQ 440 L+L + + + LL D+A ++P TI G+++ L +P++G+++C + +NP +Q Sbjct: 158 LQLDGIRVVEDAMYLLEDLAQGSVPFDTIAEVEGHLHFLFLSIPVKGRISCVMHINPHNQ 217
Query: 441 LIISQDC 461 I+ QDC Sbjct: 218 TIVHQDC 224
>tr|A7P7D4|A7P7D4_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034415001 PE=4 SV=1 Length = 253
Score = 89.7 bits (221), Expect = 8e-17 Identities = 44/150 (29%), Positives = 85/150 (56%) Frame = +3
Query: 12 EITVTDITLRNIHFNVKKGDSLIPQVFLDLSLDVRLRARNPNFFGVTYENVTVSILFEGD 191 ++++ + LR I + P++ LD+S+ + ++ RN + + + Y ++ V+I + G Sbjct: 91 DVSIVRLRLRRIAVHT------FPRLSLDVSMSLMVKVRNVDLYSMNYRSLHVAIEYRGK 144
Query: 192 EIAQVESYGAKLDALSTSYADATLELHSYCIASNVLKLLADVANKALPLQTITMCRGNIN 371 E+ V S + A +S DA+LEL+ + S+V+ +L D+A +P+ T+T RG++ Sbjct: 145 ELGNVTSEEGHVRARGSSLVDASLELNGVAVLSDVIFVLEDLAKGTIPIDTVTEVRGSMG 204
Query: 372 LYILKLPLEGKVTCNLVVNPQDQLIISQDC 461 +LPL KV+C + VN Q ++ Q+C Sbjct: 205 FLFFQLPLRTKVSCQVYVNTNTQKVLHQNC 234
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