BP912222
Clone id YMU001_000016_E10
Library
Length 453
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAACGAATTCTATCAGATCTCCTAGCATACACAATTTTCTATGATCCAAGAGGGGCAAAA
TTCTCACAATACAGTGTAAAACGCATAGCAAAGGAACGTCGTCTCTCTAAGAACTACATA
AAGGAACAGCAGATCTCCATGAACCCTAATGGAAATAGGCATGTAGGTGGTATCTTTGTG
GAAGAAGATGGAGCTGTAGAGGTGATTCCTGTGGAGGATCCCTGCGTTTGTATACCTGTT
TGACTGAAGGCACCTCTGTCTGCCTCTGCTACCGCATTCACCTCTTCTTTGCTTCTCTCC
TCCAAGCTCTCTTAGCCCCTGGCCTCTTAGATCCTAATGATACCTCTTGTCCCTCCAGCA
TTGTCTGATGTCTCTACCCTAGACGCTTCCCTATCCTCCTAGTGCATCCAGCTGCCATAT
AGTCTTCGCTACCACATATTAAACAATGTCCCA
■■Homology search results ■■ -
sp_hit_id Q9FQ02
Definition sp|Q9FQ02|XRN2_ARATH 5'-3' exoribonuclease 2 OS=Arabidopsis thaliana
Align length 44
Score (bit) 32.0
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912222|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_E10.
(453 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FQ02|XRN2_ARATH 5'-3' exoribonuclease 2 OS=Arabidopsis thal... 32 1.3
sp|Q9ZKF3|Y396_HELPJ Uncharacterized protein jhp_0985 OS=Helicob... 31 2.9
sp|Q5URA3|YL145_MIMIV Uncharacterized protein L145 OS=Acanthamoe... 30 3.8
sp|O25157|Y396_HELPY Uncharacterized protein HP_0396 OS=Helicoba... 30 3.8

>sp|Q9FQ02|XRN2_ARATH 5'-3' exoribonuclease 2 OS=Arabidopsis
thaliana GN=XRN2 PE=2 SV=1
Length = 1012

Score = 32.0 bits (71), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3

Query: 451 GHCLICGSEDYMAAGCTRRIGKRLG*RHQTMLEGQEVSLGSKRP 320
G C +CG E + AA C +I ++ G ML+ E + K+P
Sbjct: 264 GKCFLCGQEGHRAADCEGKIKRKTG----EMLDNTEADVVVKKP 303


>sp|Q9ZKF3|Y396_HELPJ Uncharacterized protein jhp_0985
OS=Helicobacter pylori J99 GN=jhp_0985 PE=3 SV=1
Length = 616

Score = 30.8 bits (68), Expect = 2.9
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1

Query: 249 LQSNRYTNAGILHRNHLYSSIFFH---KDTTYMPISIRVHGDLLFLYVVLRETTFLCYAF 79
LQ + G+ + H S +FFH K MPISI + GDLL+ + T L Y
Sbjct: 178 LQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPISIAIGGDLLYTWCA---TAPLPYGI 234

Query: 78 YTVL 67
Y ++
Sbjct: 235 YELM 238


>sp|Q5URA3|YL145_MIMIV Uncharacterized protein L145 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L145 PE=4 SV=1
Length = 274

Score = 30.4 bits (67), Expect = 3.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = -1

Query: 228 NAGILHRNHLYSSIFFHKDTTYMPISIRVHGDLLFLYVVLRETTFLCYAFYTVL*EFC 55
N I+ R+ ++ F D Y PIS+ +H + +++ L FY ++ C
Sbjct: 153 NPVIISRHDIFEGFIFDNDVEY-PISVTIHMNCRSTKFTIKQENMLMEGFYLIMMSMC 209


>sp|O25157|Y396_HELPY Uncharacterized protein HP_0396
OS=Helicobacter pylori GN=HP_0396 PE=3 SV=1
Length = 616

Score = 30.4 bits (67), Expect = 3.8
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1

Query: 249 LQSNRYTNAGILHRNHLYSSIFFH---KDTTYMPISIRVHGDLLFLYVVLRETTFLCYAF 79
LQ + G+ + H S +FFH K MP+SI + GDLL+ + T L Y
Sbjct: 178 LQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCA---TAPLPYGI 234

Query: 78 YTVL 67
Y ++
Sbjct: 235 YELM 238


tr_hit_id A5X2L6
Definition tr|A5X2L6|A5X2L6_9MUSC Carbamoylphosphate synthetase (Fragment) OS=Proagomyia sp. JKM-2006
Align length 49
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912222|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_E10.
(453 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5X2L6|A5X2L6_9MUSC Carbamoylphosphate synthetase (Fragment) ... 35 1.9
tr|A5X2J5|A5X2J5_9MUSC Carbamoylphosphate synthetase (Fragment) ... 34 3.2
tr|Q7Q4M3|Q7Q4M3_ANOGA AGAP008484-PA (Fragment) OS=Anopheles gam... 33 7.1
tr|A5X2J7|A5X2J7_9MUSC Carbamoylphosphate synthetase (Fragment) ... 33 7.1
tr|A5X2K8|A5X2K8_9MUSC Carbamoylphosphate synthetase (Fragment) ... 33 9.3
tr|A5X2I6|A5X2I6_9MUSC Carbamoylphosphate synthetase (Fragment) ... 33 9.3

>tr|A5X2L6|A5X2L6_9MUSC Carbamoylphosphate synthetase (Fragment)
OS=Proagomyia sp. JKM-2006 PE=4 SV=1
Length = 1297

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -1

Query: 243 SNRYTNAGILHRNHLYSSIFFHKDTTYMPISIRVHGDLLFLYVVLRETT 97
+N +TN GI+H+N Y S+ FH + T P + + D +FL V TT
Sbjct: 270 ANDHTNEGIIHKNEPYFSVQFHPEHTAGPEDLELLFD-VFLGAVKERTT 317


>tr|A5X2J5|A5X2J5_9MUSC Carbamoylphosphate synthetase (Fragment)
OS=Trichinomyia flavipes PE=4 SV=1
Length = 1287

Score = 34.3 bits (77), Expect = 3.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1

Query: 243 SNRYTNAGILHRNHLYSSIFFHKDTTYMPISIRVHGDL 130
+N +TN GI+HRN Y S+ FH + T P + V D+
Sbjct: 270 ANDHTNEGIIHRNKPYFSVQFHPEHTAGPEDLEVLFDV 307


>tr|Q7Q4M3|Q7Q4M3_ANOGA AGAP008484-PA (Fragment) OS=Anopheles
gambiae GN=AGAP008484 PE=4 SV=4
Length = 560

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1

Query: 37 FYDPRGAKFSQYSVKRIAKERRLSKNYIKEQQISMNPNGNR 159
F+D G + S+ +K+I + +R KN + QQ ++N NG R
Sbjct: 423 FFDAHGNEISRKRMKKIRRVQRRPKNKNRAQQRALNTNGRR 463


>tr|A5X2J7|A5X2J7_9MUSC Carbamoylphosphate synthetase (Fragment)
OS=Anthepiscopus sp. JKM-2006 PE=4 SV=1
Length = 1277

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1

Query: 243 SNRYTNAGILHRNHLYSSIFFHKDTTYMPISIRVHGDL 130
+N +TN GI+H+N Y S+ FH + T P + + D+
Sbjct: 270 ANDHTNEGIIHKNKPYFSVQFHPEHTAGPEDLEILFDI 307


>tr|A5X2K8|A5X2K8_9MUSC Carbamoylphosphate synthetase (Fragment)
OS=Hyperperacera sp. JKM-2006 PE=4 SV=1
Length = 1297

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -1

Query: 243 SNRYTNAGILHRNHLYSSIFFHKDTTYMPISIRVHGDLLFLYVVLRETT 97
+N +TN GI+H+N Y S+ FH + T P + + D +FL V + T
Sbjct: 270 ANDHTNEGIIHKNKPYFSVQFHPEHTAGPEDLEMLFD-VFLDAVKEKLT 317


>tr|A5X2I6|A5X2I6_9MUSC Carbamoylphosphate synthetase (Fragment)
OS=Hilarigona sp. JKM-2006 PE=4 SV=1
Length = 1294

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1

Query: 243 SNRYTNAGILHRNHLYSSIFFHKDTTYMPISIRVHGDLLFLYVVLRET 100
+N +TN GI+H+N Y S+ FH + T P + + D+ V R T
Sbjct: 270 ANDHTNEGIIHKNKPYFSVQFHPEHTAGPEDLEMLFDVFLDAVKARIT 317