BP912229
Clone id YMU001_000016_F05
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAACAATGAAAAGGTGCATATTTGATAACCTGACCAATTTCCGAAACTATTCATCACCAA
AGTTACAAGGACGTGGATACAGACTTAATTAAGCATACTGCAAGGAACGTACAAACTAAA
GATCAGTTGAAAATAGACAGGAAAGGCAAAAAACGGGATGGCAGATTAAGATTCCACCGG
CCTAAGTGCATCTCGGCTTGGGCAGACAGGCCCTGAAACATCAAAAATAGTAAACAATCA
GAACAAATGAATGGAATCGAGACTCAAATCGTGCATGCAGGTCACATACATACATGCATA
CGATACACTGACACAAACAAAATTAATGCCTTCAATCATGGTCGTCACTGTACTGAGCTG
CAGAGCTCCAACTTCGCCTATAATGCAAGGATTGGCACCACCGCACCTTAATTAACTGTA
ACAGACGCTAGAACATTATGACGTTTACAAGCTGGCGGCATATTAGTAATACCAGCTAAC
TGACATGACGAAAAAAATCACATACAGCATTGCAAGCACACATGCGTCGTATAAGCTAGG
AGCGTGCAAATGCGCGTTAAGGA
■■Homology search results ■■ -
sp_hit_id Q8YLK8
Definition sp|Q8YLK8|PSAK2_ANASP Photosystem I reaction center subunit psaK 2 OS=Anabaena sp. (strain PCC 7120)
Align length 52
Score (bit) 31.6
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912229|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_F05.
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8YLK8|PSAK2_ANASP Photosystem I reaction center subunit psaK... 32 2.8
sp|P14546|COX3_LEITA Cytochrome c oxidase subunit 3 OS=Leishmani... 31 3.7
sp|Q09777|RGS1_SCHPO Regulator of G-protein signaling 1 OS=Schiz... 30 6.3
sp|Q7SY48|HEAT1_DANRE HEAT repeat-containing protein 1 OS=Danio ... 30 6.3
sp|Q04597|YDR14_YEAST Uncharacterized protein YDR114C OS=Sacchar... 30 8.2

>sp|Q8YLK8|PSAK2_ANASP Photosystem I reaction center subunit psaK 2
OS=Anabaena sp. (strain PCC 7120) GN=psaK2 PE=3 SV=2
Length = 92

Score = 31.6 bits (70), Expect = 2.8
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = -1

Query: 254 PFICSDCLLFLMFQGLSAQAEMHLGRWNLNLPSRFLPFLSIFN*SLVCTFLA 99
P I + CLL L+ G S + H+G +P LPF SIFN V TFLA
Sbjct: 26 PIIIASCLLVLLIAGRSIRYP-HVGT---KMP---LPFPSIFNNPSVATFLA 70


>sp|P14546|COX3_LEITA Cytochrome c oxidase subunit 3 OS=Leishmania
tarentolae PE=3 SV=1
Length = 284

Score = 31.2 bits (69), Expect = 3.7
Identities = 28/70 (40%), Positives = 32/70 (45%)
Frame = -2

Query: 307 CIVCMYVCDLHARFESRFHSFVLIVYYF*CFRACLPKPRCT*AGGILICHPVFCLSCLFS 128
CIV + C L F F SF+ I Y F CF ACL +FCL CL
Sbjct: 20 CIVYLTFC-LCGLFCIMFGSFIFIDYCFICFFACL----------------LFCLVCLL- 61

Query: 127 TDL*FVRSLQ 98
DL FV SL+
Sbjct: 62 CDL-FVDSLR 70


>sp|Q09777|RGS1_SCHPO Regulator of G-protein signaling 1
OS=Schizosaccharomyces pombe GN=rgs1 PE=2 SV=1
Length = 481

Score = 30.4 bits (67), Expect = 6.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -1

Query: 227 FLMFQGLSAQAEMHLGRWNLNLP-----SRFLPFLSIFN*SLVCTFLAVCLIKSV 78
FL G ++QAE++ +WN + P SRF I S C L V ++ SV
Sbjct: 165 FLQHNGHNSQAELYASKWNHSAPVIVSISRFSSTDQILKDSSFCEMLLVRMLGSV 219


>sp|Q7SY48|HEAT1_DANRE HEAT repeat-containing protein 1 OS=Danio rerio
GN=heatr1 PE=2 SV=1
Length = 2159

Score = 30.4 bits (67), Expect = 6.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2

Query: 260 RLKSCMQVTY-IHAYDTLTQTKLMPSIMVVTVLSCRAPTSPIMQGLAPPHLN*L*QTLEH 436
RL SC Q++ + + + TKL P +++ T+ C Q P +N L + + H
Sbjct: 1798 RLTSCPQLSVRLASLSSTLATKLPPRVLIPTITKCYCSMVDAQQNRLSPLMNILKEHISH 1857

Query: 437 YD 442
D
Sbjct: 1858 MD 1859


>sp|Q04597|YDR14_YEAST Uncharacterized protein YDR114C
OS=Saccharomyces cerevisiae GN=YDR114C PE=4 SV=1
Length = 100

Score = 30.0 bits (66), Expect = 8.2
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3

Query: 366 ALQLSTVTTMIEGINFVCVSVSYACMYVTCMHDLSLDSIHLF*LFTIFD 220
ALQ+ I + F SVS++C Y TC L LF T FD
Sbjct: 12 ALQIVAFRPAITTVLFQRFSVSFSCSYFTCCTSQLLRENWLFKFLTAFD 60


tr_hit_id Q94589
Definition tr|Q94589|Q94589_9CILI Lembadion factor OS=Lembadion bullinum
Align length 41
Score (bit) 34.3
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912229|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_F05.
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q94589|Q94589_9CILI Lembadion factor OS=Lembadion bullinum GN... 34 4.8
tr|B2IJB4|B2IJB4_BEII9 Acyltransferase 3 OS=Beijerinckia indica ... 33 8.2

>tr|Q94589|Q94589_9CILI Lembadion factor OS=Lembadion bullinum GN=LF
PE=4 SV=1
Length = 350

Score = 34.3 bits (77), Expect = 4.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2

Query: 257 SRLKSCMQVTYIHAYDTLTQTKLMPSIMVVTVLSCRAPTSP 379
S++ +C+ TY T+T T P V T SC A TSP
Sbjct: 61 SKVTNCISATYTAQAQTITCTACKPGFWVATATSCTACTSP 101


>tr|B2IJB4|B2IJB4_BEII9 Acyltransferase 3 OS=Beijerinckia indica
subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
GN=Bind_2655 PE=4 SV=1
Length = 361

Score = 33.5 bits (75), Expect = 8.2
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Frame = -3

Query: 327 INFVCVSVSYACMYVTCMHDLSLDSIHLF*LFTIFDVSGPVCPSRDALRPVES*SAIPFF 148
I F+C S+ + ++ +H+ SI +F LF F + P+ + R + + FF
Sbjct: 193 IGFLCGSI-FIKNNISILHNYLFHSIFVFLLFQYFSIIIPINYNSIEGRLLSIPILLSFF 251

Query: 147 AFPV-------YFQLIFSLYVPCSMLN*VCIHVLVTLVMNSFGNWSG 28
+ YF I ++ + L+ CIHV++T + F N +G
Sbjct: 252 VISITCTSKGNYFSKIMD-FIGKNTLSIYCIHVIITAAIRIFLNQAG 297