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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912243
Clone id YMU001_000016_G07
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAGATCTTTANTGGTGGTGGTGGTGGTGGCTCATGTGCTGGACGACTTTGGGTAGGTGGT
TGGTGAGGTTGGTTTCAGTGGTGGTGGGGATAGCTTTTAGGAGCTCCGCTACGTTTGGCG
GTGTCTCGGGCTGGGCCGCTAAACTCCTGGACAGGGGGCCGCCAATGTTGCTGGCTTCGA
GGAGTCGCTTCAGACCTCCGGCTCCTGAAGCTGAGGATGATGATGGTAAGAGAGCTGGCT
TTTGATCGCCATCGCTTGCATTGCTACTATACCTATTTAGCTGTGTTGATACCAGCGAAG
CCGGTTGCAAAGAGAAGTGTATATGGGGCTCTTTCGGAGCTGATGAAACAAAGGGAGCTG
TAACTGATGCAGATATCCCACTGCTGGAGTGTAAATTGCTAGTGTTCGTGACAGCATTTG
AGGGTAAACTTGTCGAAGTGCTGAGGGTATCGGTGCCACCATTTGCCAGCTTGTTCGCTC
GTGCGCGATGGCGACCTCGATGCATGTGCCTTTCA
■■Homology search results ■■ -
sp_hit_id Q47WB0
Definition sp|Q47WB0|MAO1_COLP3 NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
Align length 76
Score (bit) 32.7
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912243|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_G07.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q47WB0|MAO1_COLP3 NAD-dependent malic enzyme OS=Colwellia psy...    33   1.0  
sp|Q5HYC2|K2026_HUMAN Uncharacterized protein KIAA2026 OS=Homo s...    32   2.3  
sp|Q3SMH1|MURB_THIDA UDP-N-acetylenolpyruvoylglucosamine reducta...    31   3.9  
sp|A6NML5|TM212_HUMAN Transmembrane protein 212 OS=Homo sapiens ...    30   6.7  
sp|Q8DY84|OXAA2_STRA5 Membrane protein oxaA 2 OS=Streptococcus a...    30   8.7  
sp|Q8E3U9|OXAA2_STRA3 Membrane protein oxaA 2 OS=Streptococcus a...    30   8.7  

>sp|Q47WB0|MAO1_COLP3 NAD-dependent malic enzyme OS=Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3
           SV=1
          Length = 562

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = -1

Query: 389 LQQWDICISYSSLCFISSERAPYTLLFATGFAGINTAK*V**QCKRWRSKASSLTIIILS 210
           + +WDI   ++SL  +     P  L+  +G AG+ T K +       +S      I  LS
Sbjct: 359 IAEWDIAGEFASLVEVMHGAKPDILIGVSGQAGLFTEKVI----TAMKSHCEMPIIFPLS 414

Query: 209 FRSRRSEATPRSQQHW 162
             SR+ EATP    +W
Sbjct: 415 NPSRQVEATPSQVINW 430


>sp|Q5HYC2|K2026_HUMAN Uncharacterized protein KIAA2026 OS=Homo
            sapiens GN=KIAA2026 PE=2 SV=1
          Length = 1278

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 412  VTNTSNLHSSSGISASVTAPFVSSAPKEPHIHFSLQPASLVSTQLNRYS 266
            +TNTSN  S     A V  P  SSAP    IH +  P+++ S   +++S
Sbjct: 995  ITNTSNFASLPNQQALVKTPSYSSAPGGTTIHTASAPSNVTSLVGSQFS 1043


>sp|Q3SMH1|MURB_THIDA UDP-N-acetylenolpyruvoylglucosamine reductase
           OS=Thiobacillus denitrificans (strain ATCC 25259)
           GN=murB PE=3 SV=1
          Length = 324

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
 Frame = +3

Query: 57  WLVRLVSV-----VVGIAFRSSATFGGVSGWAAKLLDRGPPMLLASRSRFRPPAPEAEDD 221
           WLVR V       +VG+        GGV+G    L      + L SR+   PPAP A D 
Sbjct: 56  WLVRSVPADEAIHMVGLGSNLLVRDGGVAGVVILLHGVLTKLALESRTHGLPPAPPARDT 115

Query: 222 D--GKRAGF*SPSLA 260
                +AG  SP LA
Sbjct: 116 AVVYAQAGVASPKLA 130


>sp|A6NML5|TM212_HUMAN Transmembrane protein 212 OS=Homo sapiens
           GN=TMEM212 PE=2 SV=2
          Length = 194

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -1

Query: 449 YPQHFDKFTLKCC----HEH*QFTLQQWDICISYSSLC 348
           +P  + KF L C     +E    TLQ  D+C+S++ LC
Sbjct: 124 FPYPYAKFPLACVDPPHYEEYHLTLQALDLCLSFTLLC 161


>sp|Q8DY84|OXAA2_STRA5 Membrane protein oxaA 2 OS=Streptococcus
           agalactiae serotype V GN=oxaA2 PE=3 SV=1
          Length = 310

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 228 KRAGF*SPSLALLLYLFSCVDTSEAGCKEKCIWGSFG 338
           KR  F S SL++LL L  CV   +AG     IW + G
Sbjct: 6   KRILFSSLSLSMLLLLTGCVSVDKAGKPYGVIWNTLG 42


>sp|Q8E3U9|OXAA2_STRA3 Membrane protein oxaA 2 OS=Streptococcus
           agalactiae serotype III GN=oxaA2 PE=3 SV=1
          Length = 310

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 228 KRAGF*SPSLALLLYLFSCVDTSEAGCKEKCIWGSFG 338
           KR  F S SL++LL L  CV   +AG     IW + G
Sbjct: 6   KRILFSSLSLSILLLLTGCVSVDKAGKPYGVIWNTLG 42
tr_hit_id B6TMF9
Definition tr|B6TMF9|B6TMF9_MAIZE AT-HSFB4 OS=Zea mays
Align length 54
Score (bit) 35.8
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912243|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_G07.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6TMF9|B6TMF9_MAIZE AT-HSFB4 OS=Zea mays PE=2 SV=1                  36   1.3  
tr|A6S6G4|A6S6G4_BOTFB Putative uncharacterized protein OS=Botry...    35   1.7  
tr|Q17QW9|Q17QW9_BOVIN PWWP domain containing 2B OS=Bos taurus G...    34   4.9  

>tr|B6TMF9|B6TMF9_MAIZE AT-HSFB4 OS=Zea mays PE=2 SV=1
          Length = 394

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
 Frame = +3

Query: 120 GVSGWAAKLLDRGPPMLL------ASRSRFRPPAPEAEDDDGKRAGF*SPSLAL 263
           G SG A    DR PP +L      A+R   RP +PE EDD    +    P LAL
Sbjct: 318 GSSGTARSAADRAPPTMLFGVHLSAARGSKRPASPEEEDDQSPTSPAGKPRLAL 371


>tr|A6S6G4|A6S6G4_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_08492
           PE=4 SV=1
          Length = 532

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = +3

Query: 234 AGF*SPSLALLLYLFSCVDTSEAGCKEKCIWGSFGADETKGAVTDADIPLLECKLLVFVT 413
           +GF +   A  LY+ S   +   G  +   W   GA E +G   + D+P+ E K++    
Sbjct: 288 SGFVAYGKASPLYILSGKQSRRFGKVQDSCWALIGAMELEGITVNYDLPMDEIKMIFLTA 347

Query: 414 AFEGKLVEVLRVSVPPFA 467
            FE     +L +  P FA
Sbjct: 348 LFEKYQWSMLLLPQPLFA 365


>tr|Q17QW9|Q17QW9_BOVIN PWWP domain containing 2B OS=Bos taurus
           GN=PWWP2B PE=2 SV=1
          Length = 484

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 201 APEAEDDDGKRA--GF*SPSLALLLYLFSCVDTSEAGCKEKCIWGSFGADETKGAVTDAD 374
           A   EDDD K    G   P  A L +L +C   S  GC  +  W S   DE+K + +D  
Sbjct: 278 ASSGEDDDCKGCPRGAHGPDNAGLAFLATCPGRS--GCTSELAWSSDSLDESKSSGSDGT 335

Query: 375 IP 380
           +P
Sbjct: 336 LP 337