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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912253
Clone id YMU001_000016_H06
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCTCCCCATTAAATGCACAGATTCGGATTTAGTTAAAGGAATGTGGGAGACCTGGAATA
GATAGAAACCACTCCTCATCTTAGATATGAATGATAAATCTAACTAAGATAACGTTAAAT
TCGATTGCATTTGGTGGTCTGCACTAAATATCGATTCTCGGGATGCTCGTAAAGCTCACG
AGCTTTTTAAAAAGGGTATTTGTATTTGGCAAGATGTGTGACACAGGAAAAAGTAGATTC
TTCTTAGAAGAAGAAATAATTTCTAATTATGGCCTTTCAATCAATGAAGCCAGCTTCCTC
TACAGGAGCATCTTGCTCTTTCTTGAAGGCCATAGCTGGAAGATTGATTGTGGGGGGTCC
TAAATTTACAACAATTACGGTGGACAAGTTGGCAGCCTCTCAATAAAATCCTACGACGTT
AAAATCCTCTTCTTCTTCTTCTTCTTCAATAAAATTTCCAGGCTACACTGGCTCACTTCA
GTATCTTTACATGGTAAACTTAACAAAAGGTGGGGTCTTTATCAAGA
■■Homology search results ■■ -
sp_hit_id Q5UNT4
Definition sp|Q5UNT4|YL670_MIMIV Putative serine/threonine-protein kinase L670 OS=Acanthamoeba polyphaga mimivirus
Align length 46
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912253|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_H06.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5UNT4|YL670_MIMIV Putative serine/threonine-protein kinase L...    33   1.1  

>sp|Q5UNT4|YL670_MIMIV Putative serine/threonine-protein kinase L670
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L670 PE=3
           SV=1
          Length = 539

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 211 KMCDTGKSRFFLEEEIISNYGLSINEASFLYRSILLFLEGHSWKID 348
           K+CD G SRF  +++II NY L +    +    IL  +  ++ KID
Sbjct: 389 KICDFGCSRFVYDKKIIGNYSLDVCSVRYRAIEILNGILPYNEKID 434
tr_hit_id B7FP03
Definition tr|B7FP03|B7FP03_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1
Align length 49
Score (bit) 34.3
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912253|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_H06.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FP03|B7FP03_PHATR Predicted protein OS=Phaeodactylum tricor...    34   4.0  

>tr|B7FP03|B7FP03_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_31665 PE=4 SV=1
          Length = 535

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -2

Query: 151 IFSADHQMQSNLTLS*LDLSFISKMRSGFYLFQVSHIPLTKSESVHLMG 5
           + S D+Q QS+L  S L  S   + R   Y    SH+PL +SE  H  G
Sbjct: 242 LHSGDYQYQSSLPFSYLSKSMSKRNREETYSPSSSHVPLQESEQGHWYG 290