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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912254
Clone id YMU001_000016_H07
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000016_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGAGAGGACCTCTTTANTCGTCCATTGCACGAGGTTCCGGTCACACACTTCTTTGGGTCT
GTGATGGAAATTGTACACACTGACTCTATGTTTGATGGATTTAAAGGGTATGAAGGCAGC
CCAAAGAGCTGCAATGTGTTAAGAAACGGGGTGAACTGCAATAGGGTGGCAGATCAAAAT
ATTGCATTGCATGGCAATGGACTGTCTATCATCCAGGCGACAGAAGTTAGTCCGACAAGA
CCATTGGAGTCCCTATTGCAGGAGTTGGATGATGAATTGGCTGTTCACATAGGGTTGGCT
GGTTTAGTTGCAATGGTGCTTCTTTCATCGAGGCTATATGCGAAGAAATGAGTTCAAACA
GTTCTCACTGGCTAGTCCGCTTCGAGCTTTGGAAGGAATCAGGTTTTAAGGAGAATTGGA
TATGGATGCTTTTTGATGATTCGGTACTGGCATCTTCATGTAAATCAAATGTACAGAAAG
GTCTCTTTTAGCCATGAGCTTGGAATCACTAACCAATCTTGTCTTCCTTTCATA
■■Homology search results ■■ -
sp_hit_id Q8T4E1
Definition sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase OS=Drosophila melanogaster
Align length 21
Score (bit) 30.8
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912254|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_H07.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase OS=Drosoph...    31   4.3  
sp|P0A5J2|AMPM_MYCTU Methionine aminopeptidase OS=Mycobacterium ...    30   7.4  
sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium ...    30   7.4  
sp|Q9CNV3|HSCB_PASMU Co-chaperone protein hscB homolog OS=Pasteu...    30   9.5  

>sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase OS=Drosophila
           melanogaster GN=CG4406 PE=2 SV=1
          Length = 355

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSV 63
           R+DL+ R  H+VP+T FFG++
Sbjct: 288 RKDLYPRDPHKVPITDFFGAI 308


>sp|P0A5J2|AMPM_MYCTU Methionine aminopeptidase OS=Mycobacterium
           tuberculosis GN=map PE=1 SV=1
          Length = 285

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 106 GYEGSPKSCNVLRNGVNCNRVADQNIALHGNGLSI 210
           GY+G PKSC    N V C+ + D  +   G+ ++I
Sbjct: 96  GYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNI 130


>sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium
           bovis GN=map PE=3 SV=1
          Length = 285

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 106 GYEGSPKSCNVLRNGVNCNRVADQNIALHGNGLSI 210
           GY+G PKSC    N V C+ + D  +   G+ ++I
Sbjct: 96  GYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNI 130


>sp|Q9CNV3|HSCB_PASMU Co-chaperone protein hscB homolog
           OS=Pasteurella multocida GN=hscB PE=3 SV=1
          Length = 172

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
 Frame = -3

Query: 481 PFCTFDL----HEDASTESSKSIHIQFSLKPDSFQSSKRTSQ*ELFELISSHIASMKEAP 314
           PF  FDL    H D +T S++ + +Q SL PD+F +     Q     L     A + +A 
Sbjct: 3   PFNIFDLPVDFHVDQATLSARYLALQKSLHPDNFTTHSAQEQ----RLAMQRSAEVNDAL 58

Query: 313 LQLNQPTLCEQPI 275
             L  P L  + I
Sbjct: 59  QILKDPILRAETI 71
tr_hit_id B8LLJ3
Definition tr|B8LLJ3|B8LLJ3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 36
Score (bit) 55.5
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912254|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_H07.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LLJ3|B8LLJ3_PICSI Putative uncharacterized protein OS=Picea...    55   2e-06
tr|Q6Z6K3|Q6Z6K3_ORYSJ Os02g0219400 protein OS=Oryza sativa subs...    54   5e-06
tr|A2X2H8|A2X2H8_ORYSI Putative uncharacterized protein OS=Oryza...    54   5e-06
tr|B4FAI5|B4FAI5_MAIZE Putative uncharacterized protein OS=Zea m...    53   9e-06
tr|Q9FRR3|Q9FRR3_ARATH F22O13.24 OS=Arabidopsis thaliana PE=4 SV=1     46   0.001
tr|Q8LFF3|Q8LFF3_ARATH Putative GPI-anchor transamidase OS=Arabi...    46   0.001
tr|Q8GYI6|Q8GYI6_ARATH Putative GPI-anchor transamidase OS=Arabi...    46   0.001
tr|A7QMR1|A7QMR1_VITVI Chromosome undetermined scaffold_127, who...    44   0.005
tr|A9TIH6|A9TIH6_PHYPA Predicted protein OS=Physcomitrella paten...    43   0.012
tr|Q54N74|Q54N74_DICDI Phosphatidylinositol glycan, class K OS=D...    38   0.29 
tr|B0X7D1|B0X7D1_CULQU Zinc finger protein 345 OS=Culex quinquef...    36   1.1  
tr|Q2G7W5|Q2G7W5_NOVAD UDP-galactose 4-epimerase OS=Novosphingob...    36   1.4  
tr|B3RP51|B3RP51_TRIAD Putative uncharacterized protein OS=Trich...    35   1.9  
tr|Q82NA8|Q82NA8_STRAW Putative multiple sugar ABC transporter p...    34   4.1  
tr|B0DAV8|B0DAV8_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.2  
tr|B2G7I0|B2G7I0_LACRJ Putative uncharacterized protein OS=Lacto...    33   9.2  
tr|A5VK38|A5VK38_LACRD 2-octaprenylphenol hydroxylase OS=Lactoba...    33   9.2  
tr|Q6C2I0|Q6C2I0_YARLI YALI0F07733p OS=Yarrowia lipolytica GN=YA...    33   9.3  

>tr|B8LLJ3|B8LLJ3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 404

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGFKG 108
           R DL+ RPL +VPVT+FFGSVME +HTDS + GF G
Sbjct: 281 RVDLYPRPLDKVPVTNFFGSVMETIHTDSAYSGFTG 316


>tr|Q6Z6K3|Q6Z6K3_ORYSJ Os02g0219400 protein OS=Oryza sativa subsp.
           japonica GN=P0027A02.26 PE=2 SV=1
          Length = 404

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGF 102
           R DL+ RPL+EVPVT+FFGSVM  +HTDS + GF
Sbjct: 289 RMDLYERPLNEVPVTNFFGSVMNTIHTDSAYSGF 322


>tr|A2X2H8|A2X2H8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06395 PE=4 SV=1
          Length = 404

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGF 102
           R DL+ RPL+EVPVT+FFGSVM  +HTDS + GF
Sbjct: 289 RMDLYERPLNEVPVTNFFGSVMNTIHTDSAYSGF 322


>tr|B4FAI5|B4FAI5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 402

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 23/34 (67%), Positives = 29/34 (85%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGF 102
           R DL+ RPL+EVPVT+FFGSVM+ +HTDS + GF
Sbjct: 289 RMDLYERPLNEVPVTNFFGSVMKTLHTDSAYTGF 322


>tr|Q9FRR3|Q9FRR3_ARATH F22O13.24 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 407

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGF 102
           R DL+   L EVPVT+FFGSVME +HTDS +  F
Sbjct: 252 RTDLYQPHLVEVPVTNFFGSVMETIHTDSAYKAF 285


>tr|Q8LFF3|Q8LFF3_ARATH Putative GPI-anchor transamidase
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 388

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGF 102
           R DL+   L EVPVT+FFGSVME +HTDS +  F
Sbjct: 269 RTDLYQPHLVEVPVTNFFGSVMETIHTDSAYKAF 302


>tr|Q8GYI6|Q8GYI6_ARATH Putative GPI-anchor transamidase
           OS=Arabidopsis thaliana GN=At1g08750/F22O13_24 PE=2 SV=1
          Length = 388

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGF 102
           R DL+   L EVPVT+FFGSVME +HTDS +  F
Sbjct: 269 RTDLYQPHLVEVPVTNFFGSVMETIHTDSAYKAF 302


>tr|A7QMR1|A7QMR1_VITVI Chromosome undetermined scaffold_127, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00002174001 PE=4 SV=1
          Length = 405

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMF 93
           R DL+ R L EVPVT+FFGSVME +HT S +
Sbjct: 285 RMDLYERRLEEVPVTNFFGSVMETIHTVSAY 315


>tr|A9TIH6|A9TIH6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170262 PE=4 SV=1
          Length = 391

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDSMFDGFKG 108
           R DLF R L +V VT FFGSVM I HT++ + GF G
Sbjct: 279 RADLFPRTLDKVLVTDFFGSVMGIKHTEAAYVGFTG 314


>tr|Q54N74|Q54N74_DICDI Phosphatidylinositol glycan, class K
           OS=Dictyostelium discoideum GN=pigK PE=4 SV=1
          Length = 446

 Score = 38.1 bits (87), Expect = 0.29
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = +1

Query: 1   REDLFXRPLHEVPVTHFFGSVMEIVHTDS 87
           R DLF RPL +VPVT FFGSVM    T S
Sbjct: 307 RTDLFNRPLDQVPVTDFFGSVMRADLTPS 335