BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912261|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_A04.
         (512 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q09910|YAJB_SCHPO Uncharacterized protein C30D11.11 OS=Schizo...    32   1.3  
sp|Q96AK3|ABC3D_HUMAN Probable DNA dC->dU-editing enzyme APOBEC-...    32   1.7  

>sp|Q09910|YAJB_SCHPO Uncharacterized protein C30D11.11
           OS=Schizosaccharomyces pombe GN=SPAC30D11.11 PE=2 SV=1
          Length = 442

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
 Frame = +1

Query: 223 WHTFLSLCGYK----------LTIYAMVHCDVSMLMYSCKACE-PKPYMVEIFIEANGLL 369
           WHTF SL  YK          + I A++   +  + Y    C+ P  ++   F    GL+
Sbjct: 263 WHTFSSLSNYKHMRCAACMDYVGISALIAASIISVEYHAFVCQGPLRFIFIAFTGTLGLI 322

Query: 370 FYFFPWYAW 396
             + PW  W
Sbjct: 323 GIYTPWKKW 331


>sp|Q96AK3|ABC3D_HUMAN Probable DNA dC->dU-editing enzyme APOBEC-3D
           OS=Homo sapiens GN=APOBEC3D PE=1 SV=1
          Length = 386

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
 Frame = +1

Query: 85  SCLCFTFHFGKDLSIVQRK-------VLCWTSCEA------WILLCANILSMSTSYQ**W 225
           S LCFT    K  S V RK       V   T C A      W   C +ILS +T+Y+  W
Sbjct: 229 SWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWF--CDDILSPNTNYEVTW 286

Query: 226 HTFLS---LCGYKLTIYAMVHCDVSMLMYSCKAC 318
           +T  S    C  ++  +   H +V++ +++ + C
Sbjct: 287 YTSWSPCPECAGEVAEFLARHSNVNLTIFTARLC 320

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912261|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_A04.
         (512 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O64546|O64546_ARATH YUP8H12R.35 protein OS=Arabidopsis thalia...    35   2.8  
tr|A0Q0R5|A0Q0R5_CLONN Phosphatidate cytidylyltransferase OS=Clo...    34   3.7  
tr|A5ZFB4|A5ZFB4_9BACE Putative uncharacterized protein OS=Bacte...    33   8.1  
tr|Q6F6C6|Q6F6C6_9ACAR NADH-ubiquinone oxidoreductase chain 4 OS...    33   8.1  

>tr|O64546|O64546_ARATH YUP8H12R.35 protein OS=Arabidopsis thaliana
           GN=YUP8H12R.35 PE=4 SV=1
          Length = 577

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 25/100 (25%), Positives = 40/100 (40%)
 Frame = +1

Query: 112 GKDLSIVQRKVLCWTSCEAWILLCANILSMSTSYQ**WHTFLSLCGYKLTIYAMVHCDVS 291
           GK L ++Q  VL W  C      C+  L  +      W  FLSL      +Y ++    +
Sbjct: 51  GKLLGLLQLSVLYWKDCIFRGFHCSAKLGSAALLLIMWSCFLSLTSLSCLLYVLLSMGAA 110

Query: 292 MLMYSCKACEPKPYMVEIFIEANGLLFYFFPWYAWHTNTM 411
             +     C P  ++V +F    G+L  +     W T T+
Sbjct: 111 AAVVLNLGCTPGLFIVGLF----GILILWMYANFWITGTL 146


>tr|A0Q0R5|A0Q0R5_CLONN Phosphatidate cytidylyltransferase
           OS=Clostridium novyi (strain NT) GN=cdsA PE=3 SV=1
          Length = 266

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 47  VCNKASTFQVMFVLVYVLLFILEKISLLCKEKCFVGLHVK-PGFSYVLIYYQ*VLHIND- 220
           + N + +FQ +F+++   LFI+  I ++  +  F+ + V   GF YV +++  +  IND 
Sbjct: 67  IINNSFSFQKLFLMILFALFIMLCIPVISDKYNFIDVAVTLMGFLYVTMFFSFIALINDK 126

Query: 221 -NGTHFCHYVDISS 259
            NG +    + IS+
Sbjct: 127 PNGKYLIWIIFISA 140


>tr|A5ZFB4|A5ZFB4_9BACE Putative uncharacterized protein
           OS=Bacteroides caccae ATCC 43185 GN=BACCAC_01578 PE=4
           SV=1
          Length = 447

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 22/172 (12%)
 Frame = +2

Query: 11  PDSSELLETLPQVCNKASTFQVMFVLVYVLLFILEKISLLCKEKCFVGLHVKPG-----F 175
           P  +++L  LP VC     +  +  L ++ ++        CK K    +H         F
Sbjct: 142 PHPADIL--LPMVCAINYVWSALLCLFFLFVY--------CKVKHAQNIHWPATIFLFLF 191

Query: 176 SYVLIYYQ*VLHINDNGTHFCHY-----------VDISSQFMQWCIVMYPC*CTLAR--- 313
           S +  +    L I  +G  F +Y            +IS     W   +  C    AR   
Sbjct: 192 SIITSWTHEALVIGISGALFLNYCLHYKKQKTKKAEISMMVGFWIGTLLVCLSPAARDRA 251

Query: 314 ---HVNQSHTWLKFSLKPMAYYSIFFLGMHGILIR*RYNTHHYILFRYSTSY 460
              HV+   T L  + +  A+Y +FFL    +L   +YNTH +  F Y   +
Sbjct: 252 LLDHVSIWETCLALASQLKAFYILFFLLGGMLLYEKKYNTHIFRKFIYDNQF 303


>tr|Q6F6C6|Q6F6C6_9ACAR NADH-ubiquinone oxidoreductase chain 4
           OS=Ixodes uriae GN=ND4 PE=3 SV=1
          Length = 439

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 229 TFLSLCGYKLTIYAMVHCDVSMLMYSCKACEPKPYMVEIFIEANGLLFYFFPWYAW 396
           +F+S  GY L +Y+        ++YS K  E + YMV        +LF+FFP   W
Sbjct: 382 SFIS-AGYSLYLYSYTQHGDGWVLYSVKMIEIREYMV--------MLFHFFPMILW 428