BP912279
Clone id YMU001_000017_B11
Library
Length 446
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGCTTGAATCACAGTACAAAATACACCACAAGAGAAAGAGGCTCAATGAAATAAGGGATA
AATTCCAAACTTAAATGGGTACATTTGCAATCTACTGCCGTAGGCTGATGTATCAGAACT
TGTAGTGGAACATCCATTGCCTTTTCACCTGAGGATAATGTGCAGTAGGTGGTGGGTACC
TCTAGATCGAGTATCTTCTCCTTGCTTCCTTCAATACACGAGCAGCTCATTCCTTGGAGA
AAGAAAGAACTATGAGAAGCCGCCAATTCTTTTCTTCAATGGTCACTTGCGTGATTCGCA
TCCTTGTGCTCGTGCTCGTGCTCTTTGCAATATGGACACGGTGCAGAGTGCAAAGCGCAT
GCTTTTGTTGCCTTTGAGTAGGTTAGTCTCCTGAGCATAGTATCATCCCCAATACAATAT
GAGATCCTCGAAGAGGCATTGAATCT
■■Homology search results ■■ -
sp_hit_id O77086
Definition sp|O77086|C3G_DROME Guanine nucleotide-releasing factor 2 OS=Drosophila melanogaster
Align length 55
Score (bit) 30.0
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912279|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_B11.
(446 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O77086|C3G_DROME Guanine nucleotide-releasing factor 2 OS=Dro... 30 4.6
sp|A7Y3J6|YCF2_IPOPU Protein ycf2 OS=Ipomoea purpurea GN=ycf2-A ... 29 7.8
sp|Q3KQW7|LIMC1_XENLA LIM and calponin homology domains-containi... 29 7.8

>sp|O77086|C3G_DROME Guanine nucleotide-releasing factor 2
OS=Drosophila melanogaster GN=C3G PE=1 SV=4
Length = 1571

Score = 30.0 bits (66), Expect = 4.6
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = -2

Query: 439 MPLRGSHIVLGMILCSGD*PTQRQQKHALCTLHRVHIAKSTSTSTRMRITQVTIE 275
+P++ HI+ M +CS + Q +H T+H +I+++ S S M I ++ E
Sbjct: 930 LPIKKKHILAYMEICSASTRSIEQHRH---TMHACNISRNISHSQTMNIMPMSKE 981


>sp|A7Y3J6|YCF2_IPOPU Protein ycf2 OS=Ipomoea purpurea GN=ycf2-A PE=3
SV=1
Length = 2197

Score = 29.3 bits (64), Expect = 7.8
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2

Query: 436 PLRGSHIVLGMILCSG-D*PTQRQQKHALCTLHRVHIAKSTSTSTRMRITQVTIEEKNWR 260
P S+I L I CS D P+++++K +LC V + K +T R + +I K W
Sbjct: 1135 PNFNSNIGLIHIPCSEKDFPSEKRKKQSLCLKKCVGVQKGRMYTTFQRDSAFSILSKKWN 1194

Query: 259 L 257
L
Sbjct: 1195 L 1195


>sp|Q3KQW7|LIMC1_XENLA LIM and calponin homology domains-containing
protein 1 OS=Xenopus laevis GN=limch1 PE=2 SV=1
Length = 1083

Score = 29.3 bits (64), Expect = 7.8
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1

Query: 326 KEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDLEVPTTYCTLSSG 147
KE+E HK + + R A S FFLQ + C E S + +L P CT
Sbjct: 721 KENESSHKVQLNITLQTRN--AWRRSQFFLQSVDTECTEKSPALVPNLSSPNRSCTWDPE 778

Query: 146 EK 141
E+
Sbjct: 779 EE 780


tr_hit_id A7B099
Definition tr|A7B099|A7B099_RUMGN Putative uncharacterized protein OS=Ruminococcus gnavus ATCC 29149
Align length 55
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912279|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_B11.
(446 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7B099|A7B099_RUMGN Putative uncharacterized protein OS=Rumin... 34 4.1
tr|Q1CET6|Q1CET6_YERPN Insertion sequence protein OS=Yersinia pe... 33 5.3
tr|Q1CBB0|Q1CBB0_YERPA Insertion sequence protein OS=Yersinia pe... 33 5.3
tr|Q0WI73|Q0WI73_YERPE Insertion sequence protein OS=Yersinia pe... 33 5.3
tr|Q74QJ4|Q74QJ4_YERPE Insertion sequence protein OS=Yersinia pe... 33 5.3
tr|A6BTR8|A6BTR8_YERPE Insertion sequence protein OS=Yersinia pe... 33 5.3
tr|Q666L5|Q666L5_YERPS Insertion sequence protein OS=Yersinia ps... 33 9.1

>tr|A7B099|A7B099_RUMGN Putative uncharacterized protein
OS=Ruminococcus gnavus ATCC 29149 GN=RUMGNA_00975 PE=3
SV=1
Length = 771

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1

Query: 350 HSAPCPYCKEHEHE-HKDANHASDH*RKELAASHSSFFLQGMSCS-CIEGSKEKI 192
H C EH HE HK+A+H DH K++ + L+ + C+ C +EKI
Sbjct: 47 HEDACGCGHEHHHEEHKEADHTFDHAEKQV------YILENLGCAHCASKMEEKI 95


>tr|Q1CET6|Q1CET6_YERPN Insertion sequence protein OS=Yersinia
pestis bv. Antiqua (strain Nepal516) GN=YPN_3167 PE=4
SV=1
Length = 91

Score = 33.5 bits (75), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 338 CPYCKEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDL 183
CP+C++ K + H R A SF L+ +C G KE+I+DL
Sbjct: 8 CPFCEQFHPVKKHGPERTGHQRYRCQACRRSFQLEYEYRACYPGMKEQIVDL 59


>tr|Q1CBB0|Q1CBB0_YERPA Insertion sequence protein OS=Yersinia
pestis bv. Antiqua (strain Antiqua) GN=YPA_0293 PE=4
SV=1
Length = 91

Score = 33.5 bits (75), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 338 CPYCKEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDL 183
CP+C++ K + H R A SF L+ +C G KE+I+DL
Sbjct: 8 CPFCEQFHPVKKHGPERTGHQRYRCQACRRSFQLEYEYRACYPGMKEQIVDL 59


>tr|Q0WI73|Q0WI73_YERPE Insertion sequence protein OS=Yersinia
pestis GN=insA PE=4 SV=1
Length = 91

Score = 33.5 bits (75), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 338 CPYCKEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDL 183
CP+C++ K + H R A SF L+ +C G KE+I+DL
Sbjct: 8 CPFCEQFHPVKKHGPERTGHQRYRCQACRRSFQLEYEYRACYPGMKEQIVDL 59


>tr|Q74QJ4|Q74QJ4_YERPE Insertion sequence protein OS=Yersinia
pestis GN=YP_3472 PE=4 SV=1
Length = 92

Score = 33.5 bits (75), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 338 CPYCKEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDL 183
CP+C++ K + H R A SF L+ +C G KE+I+DL
Sbjct: 9 CPFCEQFHPVKKHGPERTGHQRYRCQACRRSFQLEYEYRACYPGMKEQIVDL 60


>tr|A6BTR8|A6BTR8_YERPE Insertion sequence protein OS=Yersinia
pestis CA88-4125 GN=YPE_2297 PE=4 SV=1
Length = 91

Score = 33.5 bits (75), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 338 CPYCKEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDL 183
CP+C++ K + H R A SF L+ +C G KE+I+DL
Sbjct: 8 CPFCEQFHPVKKHGPERTGHQRYRCQACRRSFQLEYEYRACYPGMKEQIVDL 59


>tr|Q666L5|Q666L5_YERPS Insertion sequence protein OS=Yersinia
pseudotuberculosis GN=insA PE=4 SV=1
Length = 91

Score = 32.7 bits (73), Expect = 9.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 338 CPYCKEHEHEHKDANHASDH*RKELAASHSSFFLQGMSCSCIEGSKEKILDL 183
CP+C++ K + H R A SF L+ +C G KE+I+DL
Sbjct: 8 CPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACYPGMKEQIVDL 59