BP912283 |
Clone id |
YMU001_000017_C03 |
Library |
YMU01 |
Length |
545 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000017_C03. |
Accession |
BP912283 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAAGAGACAGTTTCAACTAAGGATTGGCTACGCCTTGGAAGTCTCCAGACAACATCTGTA GATCAGAAGGGGCATGATCTTTCAGTGATGGGGCCTCCACTTAACCCTTCCATCAATGAG GGAAAATTTTTGGGAGGGCATATTGATTCTGTAAGAGGCAGTCTGCATAATTGCTTGCCT CTTTATCAGCGACAAGAAGTCAGAGTGGATCTTCTAAGCACCGGGAGACTTGTCTTAGGA ATGTCCTGGTGTAACAAGAATGCAATTTTCCCAGCAGGTTTTCGGAGTCGGGTGCTTTTT ACTAGTTTTTTAGATCCCTGCAAAATGTGCTTCTATATCTCAGAAGTTTTGGACTATGGG CGTGGAGGACCTCTTTTTAAGGTTACCATGGAAGATCATCCCAATGAAGTTTTTGTGCAT GGTTCCATTGACAAATGCTGGCAAATGGTGCAAGAGAGAGTGAACATTGTGATCCAATTG CATCGCAGTTTTGGGAAGGTGGGGTTGCCGCCTTTGCGTTCTCCTGATGATATTCGGGGC TTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q66IH2 |
Definition |
sp|Q66IH2|TBRG1_XENTR Transforming growth factor beta regulator 1 OS=Xenopus tropicalis |
Align length |
70 |
Score (bit) |
45.8 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FRS3 |
Definition |
tr|Q9FRS3|Q9FRS3_ARATH F22O13.10 OS=Arabidopsis thaliana |
Align length |
117 |
Score (bit) |
125.0 |
E-value |
1.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912283|Adiantum capillus-veneris mRNA, clone: YMU001_000017_C03. (545 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FRS3|Q9FRS3_ARATH F22O13.10 OS=Arabidopsis thaliana PE=4 SV=1 125 1e-27 tr|A7QMV3|A7QMV3_VITVI Chromosome chr14 scaffold_128, whole geno... 125 1e-27 tr|Q0DJC2|Q0DJC2_ORYSJ Os05g0302300 protein OS=Oryza sativa subs... 119 1e-25 tr|A3B2C7|A3B2C7_ORYSJ Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A2Y2Y1|A2Y2Y1_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|Q53WJ1|Q53WJ1_ORYSJ Os05g0196500 protein OS=Oryza sativa subs... 112 1e-23 tr|B8AYX5|B8AYX5_ORYSI Putative uncharacterized protein OS=Oryza... 112 1e-23 tr|A7QC14|A7QC14_VITVI Chromosome chr10 scaffold_76, whole genom... 111 3e-23 tr|Q8GUI6|Q8GUI6_ARATH Putative uncharacterized protein At4g2040... 106 9e-22 tr|Q2V3G7|Q2V3G7_ARATH Uncharacterized protein At4g20400.2 OS=Ar... 106 9e-22 tr|Q9SY24|Q9SY24_ARATH T17H7.10 OS=Arabidopsis thaliana PE=4 SV=1 105 2e-21 tr|Q8W4M0|Q8W4M0_ARATH Similar to Human XE169 protein OS=Arabido... 102 2e-20 tr|O64752|O64752_ARATH Putative uncharacterized protein At2g3488... 99 2e-19 tr|Q9SUN9|Q9SUN9_ARATH Putative uncharacterized protein AT4g2040... 78 3e-13 tr|A3B0U9|A3B0U9_ORYSJ Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|A5BMA6|A5BMA6_VITVI Putative uncharacterized protein OS=Vitis... 62 2e-08 tr|A2DYG3|A2DYG3_TRIVA F/Y-rich N-terminus family protein OS=Tri... 56 1e-06 tr|A2DTG9|A2DTG9_TRIVA F/Y-rich N-terminus family protein OS=Tri... 55 3e-06 tr|A0DTV6|A0DTV6_PARTE Chromosome undetermined scaffold_63, whol... 54 4e-06 tr|A2DV25|A2DV25_TRIVA F/Y-rich N-terminus family protein OS=Tri... 53 1e-05 tr|A0E1P6|A0E1P6_PARTE Chromosome undetermined scaffold_73, whol... 53 1e-05 tr|A2FTX5|A2FTX5_TRIVA F/Y-rich N-terminus family protein OS=Tri... 51 5e-05 tr|A2EX18|A2EX18_TRIVA F/Y-rich N-terminus family protein OS=Tri... 50 8e-05 tr|B6MZ47|B6MZ47_BRAFL Putative uncharacterized protein OS=Branc... 48 3e-04 tr|B6MQF0|B6MQF0_BRAFL Putative uncharacterized protein OS=Branc... 48 3e-04 tr|A9TB27|A9TB27_PHYPA Predicted protein OS=Physcomitrella paten... 47 7e-04 tr|A2F9T1|A2F9T1_TRIVA Putative uncharacterized protein OS=Trich... 47 9e-04 tr|B7PTR9|B7PTR9_IXOSC Transforming growth factor beta regulator... 46 0.001 tr|A2ET83|A2ET83_TRIVA F/Y-rich N-terminus family protein OS=Tri... 45 0.002 tr|Q2L3A9|Q2L3A9_BRASY Jumonji family protein (Fragment) OS=Brac... 45 0.003
>tr|Q9FRS3|Q9FRS3_ARATH F22O13.10 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1239
Score = 125 bits (315), Expect = 1e-27 Identities = 63/117 (53%), Positives = 79/117 (67%), Gaps = 3/117 (2%) Frame = +1
Query: 187 QRQEVRVDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRG 366 +R V+ LS G ++ G SWC++ AIFP GFRSRV + + LDP MCFYISE+LD GR Sbjct: 990 RRINCNVEPLSYGCVLSGKSWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILDAGRN 1049
Query: 367 GPLFKVTMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLR---SPD 528 PLF V +E +P+EVFVH S +CW+MV+ERVN I GK LPPL+ SPD Sbjct: 1050 SPLFMVYLESNPSEVFVHMSPTRCWEMVRERVNQEITKQHKAGKSDLPPLQPSGSPD 1106
>tr|A7QMV3|A7QMV3_VITVI Chromosome chr14 scaffold_128, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002226001 PE=4 SV=1 Length = 972
Score = 125 bits (314), Expect = 1e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +1
Query: 205 VDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKV 384 V+ L G ++ G WCN+ AIFP GFRSRV + S LDP M +Y+SE+LD G GPLF V Sbjct: 743 VEPLEFGVVISGKLWCNRQAIFPKGFRSRVKYISVLDPTNMSYYVSEILDAGLAGPLFMV 802
Query: 385 TMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 ++E +P+EVFVH S +CW+MV+ERVN I G++ LPPL+ P + GL Sbjct: 803 SLEHYPSEVFVHVSAARCWEMVRERVNQEITKQHKLGRMPLPPLQPPGSLDGL 855
>tr|Q0DJC2|Q0DJC2_ORYSJ Os05g0302300 protein OS=Oryza sativa subsp. japonica GN=Os05g0302300 PE=4 SV=1 Length = 971
Score = 119 bits (297), Expect = 1e-25 Identities = 59/113 (52%), Positives = 74/113 (65%) Frame = +1
Query: 205 VDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKV 384 V+LL +G +++G WCN+ AIFP GF+SRV F S LDP + C YISEVLD G GPLF+V Sbjct: 772 VELLDSGTMMIGKKWCNQQAIFPKGFKSRVTFHSVLDPTRTCCYISEVLDAGLLGPLFRV 831
Query: 385 TMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 T+E P F H S +CW V++RVN I SFGK GLP S + + GL Sbjct: 832 TVEGLPEVSFTHTSPMQCWDSVRDRVNEEIAKQISFGKSGLPDFLSCNSLNGL 884
>tr|A3B2C7|A3B2C7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017199 PE=4 SV=1 Length = 954
Score = 119 bits (297), Expect = 1e-25 Identities = 59/113 (52%), Positives = 74/113 (65%) Frame = +1
Query: 205 VDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKV 384 V+LL +G +++G WCN+ AIFP GF+SRV F S LDP + C YISEVLD G GPLF+V Sbjct: 755 VELLDSGTMMIGKKWCNQQAIFPKGFKSRVTFHSVLDPTRTCCYISEVLDAGLLGPLFRV 814
Query: 385 TMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 T+E P F H S +CW V++RVN I SFGK GLP S + + GL Sbjct: 815 TVEGLPEVSFTHTSPMQCWDSVRDRVNEEIAKQISFGKSGLPDFLSCNSLNGL 867
>tr|A2Y2Y1|A2Y2Y1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19371 PE=4 SV=1 Length = 954
Score = 119 bits (297), Expect = 1e-25 Identities = 59/113 (52%), Positives = 74/113 (65%) Frame = +1
Query: 205 VDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKV 384 V+LL +G +++G WCN+ AIFP GF+SRV F S LDP + C YISEVLD G GPLF+V Sbjct: 755 VELLDSGTMMIGKKWCNQQAIFPKGFKSRVTFHSVLDPTRTCCYISEVLDAGLLGPLFRV 814
Query: 385 TMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 T+E P F H S +CW V++RVN I SFGK GLP S + + GL Sbjct: 815 TVEGLPEVSFTHTSPMQCWDSVRDRVNEEIAKQISFGKSGLPDFLSCNSLNGL 867
>tr|Q53WJ1|Q53WJ1_ORYSJ Os05g0196500 protein OS=Oryza sativa subsp. japonica GN=P0617H07.8 PE=2 SV=1 Length = 1238
Score = 112 bits (281), Expect = 1e-23 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%) Frame = +1
Query: 37 GSLQTTSVDQKGHDLSVMGPPL---NPSINEGKFLGGHIDSVRGSLHNCLPLYQRQEVRV 207 G LQ TS G + G P P++ GG R + R + V Sbjct: 973 GRLQRTSESLPGVEARARGHPTVTAQPALEIHSRNGGAQKGPR-----IANVVHRFKCSV 1027
Query: 208 DLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKVT 387 + L G ++ G W + AIFP GFRSRV + S +DP +M +YISE+LD G GPLF V Sbjct: 1028 EPLEIGVVLSGRLWSSSQAIFPKGFRSRVKYFSIVDPIQMAYYISEILDAGMQGPLFMVK 1087
Query: 388 MEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 +E+ P EVF++ S KCW MV+ER+N+ I+ + GK LP L+ P + GL Sbjct: 1088 LENCPGEVFINLSPTKCWNMVRERLNMEIRRQLNMGKSNLPTLQPPGSVDGL 1139
>tr|B8AYX5|B8AYX5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18782 PE=4 SV=1 Length = 1237
Score = 112 bits (281), Expect = 1e-23 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%) Frame = +1
Query: 37 GSLQTTSVDQKGHDLSVMGPPL---NPSINEGKFLGGHIDSVRGSLHNCLPLYQRQEVRV 207 G LQ TS G + G P P++ GG R + R + V Sbjct: 972 GRLQRTSESLPGVEARARGHPTVTAQPALEIHSRNGGAQKGPR-----IANVVHRFKCSV 1026
Query: 208 DLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKVT 387 + L G ++ G W + AIFP GFRSRV + S +DP +M +YISE+LD G GPLF V Sbjct: 1027 EPLEIGVVLSGRLWSSSQAIFPKGFRSRVKYFSIVDPIQMAYYISEILDAGMQGPLFMVK 1086
Query: 388 MEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 +E+ P EVF++ S KCW MV+ER+N+ I+ + GK LP L+ P + GL Sbjct: 1087 LENCPGEVFINLSPTKCWNMVRERLNMEIRRQLNMGKSNLPTLQPPGSVDGL 1138
>tr|A7QC14|A7QC14_VITVI Chromosome chr10 scaffold_76, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035196001 PE=4 SV=1 Length = 717
Score = 111 bits (277), Expect = 3e-23 Identities = 56/113 (49%), Positives = 71/113 (62%) Frame = +1
Query: 205 VDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGGPLFKV 384 V+ + G ++ G WC+K AIFP GF SRV F S DP +MC+YISEVLD G GPLFKV Sbjct: 496 VEPMHFGTVLFGKPWCSKQAIFPKGFTSRVKFFSVCDPTQMCYYISEVLDAGLLGPLFKV 555
Query: 385 TMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 T E P+E F + S +KCW+MV +++ I H S GK LP L + GL Sbjct: 556 TSEGCPSETFANVSPEKCWEMVLQKLQQEIIRHSSLGKQLLPSLECLQGVNGL 608
>tr|Q8GUI6|Q8GUI6_ARATH Putative uncharacterized protein At4g20400 (At4g20400) OS=Arabidopsis thaliana GN=At4g20400 PE=2 SV=1 Length = 954
Score = 106 bits (264), Expect = 9e-22 Identities = 56/118 (47%), Positives = 75/118 (63%) Frame = +1
Query: 190 RQEVRVDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGG 369 R + V+LLS+G LV+ WC+K AI+P GF+SRV F S LDP + YISEVLD G G Sbjct: 729 RLSLSVELLSSGSLVVKKLWCSKQAIYPKGFKSRVKFLSVLDPTNLTNYISEVLDAGLLG 788
Query: 370 PLFKVTMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 PLF+V++ED+P E F + S +KCWQMV +R+ + I L L+ + I GL Sbjct: 789 PLFRVSVEDYPTENFSNVSAEKCWQMVTQRLKLEIIKKCDQPVSSLTSLQPLESINGL 846
>tr|Q2V3G7|Q2V3G7_ARATH Uncharacterized protein At4g20400.2 OS=Arabidopsis thaliana GN=At4g20400 PE=4 SV=1 Length = 897
Score = 106 bits (264), Expect = 9e-22 Identities = 56/118 (47%), Positives = 75/118 (63%) Frame = +1
Query: 190 RQEVRVDLLSTGRLVLGMSWCNKNAIFPAGFRSRVLFTSFLDPCKMCFYISEVLDYGRGG 369 R + V+LLS+G LV+ WC+K AI+P GF+SRV F S LDP + YISEVLD G G Sbjct: 672 RLSLSVELLSSGSLVVKKLWCSKQAIYPKGFKSRVKFLSVLDPTNLTNYISEVLDAGLLG 731
Query: 370 PLFKVTMEDHPNEVFVHGSIDKCWQMVQERVNIVIQLHRSFGKVGLPPLRSPDDIRGL 543 PLF+V++ED+P E F + S +KCWQMV +R+ + I L L+ + I GL Sbjct: 732 PLFRVSVEDYPTENFSNVSAEKCWQMVTQRLKLEIIKKCDQPVSSLTSLQPLESINGL 789
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