BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912294|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_D04.
         (525 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q869P0|DDX31_DICDI Probable ATP-dependent RNA helicase ddx31 ...    31   4.1  
sp|Q8MXQ2|RB32C_DICDI Ras-related protein Rab-32C OS=Dictyosteli...    30   7.1  
sp|Q8EK90|MURI_SHEON Glutamate racemase OS=Shewanella oneidensis...    30   7.1  
sp|Q57710|IF2P_METJA Probable translation initiation factor IF-2...    30   7.1  
sp|A8GG93|NORR_SERP5 Anaerobic nitric oxide reductase transcript...    30   9.1  

>sp|Q869P0|DDX31_DICDI Probable ATP-dependent RNA helicase ddx31
           OS=Dictyostelium discoideum GN=ddx31 PE=3 SV=2
          Length = 908

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = -3

Query: 244 SSGDNSSLQRIFSSCSTIDCHLQLFSKCVSEVSPFQTHRTVSRPKQSFLRVIQLTQQQAQ 65
           +S  NS +   FSSC ++D H  +FS            R V R K+  ++  +L QQ  Q
Sbjct: 488 NSSANSKMIVFFSSCDSVDFHHYMFSN-----MKMDKERGVKRTKKEQIKQDKLIQQHKQ 542


>sp|Q8MXQ2|RB32C_DICDI Ras-related protein Rab-32C OS=Dictyostelium
           discoideum GN=rab32C PE=3 SV=2
          Length = 224

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = -1

Query: 513 RVGFIRRMSFS*IQGGILPTQPGSTSRCLSCKSLVSYALYCFHNEKL*TCVAKTRWVLCN 334
           R G + R+ F    G ++      +   L  K+      YCF+NE L T +   +  L  
Sbjct: 89  RFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDYCFNNENLPTILLANKCDLLT 148

Query: 333 PKYR----AQLFVEEDSFL*YY 280
           P Y        F E++ F  Y+
Sbjct: 149 PPYTFPEDINTFCEQNRFNKYF 170


>sp|Q8EK90|MURI_SHEON Glutamate racemase OS=Shewanella oneidensis
           GN=murI PE=3 SV=1
          Length = 273

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 249 MNPLAIIVRSKEYFQVALPSTVIYNYSQNVYRRFLLSKHIELF 121
           + P A++ +SK    +A P TV  +Y+  +  +F    H+ELF
Sbjct: 99  IKPAALLSKSKRIGLLATPGTVKRHYTHELISQFADDCHVELF 141


>sp|Q57710|IF2P_METJA Probable translation initiation factor IF-2
           OS=Methanocaldococcus jannaschii GN=infB PE=3 SV=1
          Length = 1155

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -1

Query: 300 DSFL*YYQFVRCHALE*MNPLAIIVRSKEYFQVALPSTVIYNYSQNVYRRFLLSKH 133
           + F  + +F+    L   N L + V  K+   V LPST IY   +NV+R   + +H
Sbjct: 146 EDFEKFIEFINSKILT--NELIVKVNEKDLKNVELPSTKIYKKQKNVFRSEDIIEH 199


>sp|A8GG93|NORR_SERP5 Anaerobic nitric oxide reductase transcription
           regulator norR OS=Serratia proteamaculans (strain 568)
           GN=norR PE=3 SV=2
          Length = 507

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 222 SELLSPEDSSIQGHDILQIDSTTGMSLL--QQRVVPYTWDCIRPIE 353
           SEL  P D  I GHD L++ +  G+ L   Q  +   T+D + P++
Sbjct: 92  SELPDPYDGLIPGHDQLKVHACIGLPLFAEQDLIGALTFDSLDPMQ 137

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912294|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_D04.
         (525 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4MRJ6|B4MRJ6_DROWI GK15837 OS=Drosophila willistoni GN=GK158...    34   5.1  

>tr|B4MRJ6|B4MRJ6_DROWI GK15837 OS=Drosophila willistoni GN=GK15837
           PE=4 SV=1
          Length = 1806

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -3

Query: 280 SICKMSCP*IDESSGDNSSLQRIFSSCSTID-CHLQLFSKCVSEVSPFQTHRTVSRPKQS 104
           S+   SCP    +S   SS     SSCS+ + C L   +   S  S   T ++++   Q+
Sbjct: 771 SMASTSCPSSSSTSSSTSSSSASLSSCSSSNSCSLPATAITASSTSTITTPQSLAADVQA 830

Query: 103 FLRVIQLTQQQAQ 65
            L  +   QQQ Q
Sbjct: 831 MLSTVASLQQQQQ 843