BP912301
Clone id YMU001_000017_D12
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTGTTTTTTTTTGAAAAAGCCAAGATAACTGTTAATATACCTCGAACAAGAGAGGT
AGAAACATAACAGGAAATGGGGCACATGGACTACATTGTATGCTTAGCATTATCGTCTGG
AGATCAAAAAATAACCCATGTGGCATTTTTCTGTGTAATTAGTAACTGCTAACCAAATGA
TTCATGTGAGCACTTGCTAGTGACGTCGACCAGAGACATCTACAGCTCACAAACCAAAAA
CCTACTGTCGGTAGCTGGACTTTTGTTGTTGTTGTGTATATGCATCAAATGTACACATTG
AACAACACTAACCGAGGTACTCCTACAAACTATATCTGAACGTATGTACACTACTGAGCC
GAAGGAAACCGTTTGTATCGAGGCTCTCCCTCCCTCTCTCTGAATACAAAATGCCATAAC
TTCGCCTGAACATCTCCCTGGAAACATTCACAAATCTCAAAGCCTCTTAGATGAGAGAAG
AAAGCTCAGAGCTTAAAATAGCTTGCGCTGAACTATGCCATGG
■■Homology search results ■■ -
sp_hit_id Q9NWQ4
Definition sp|Q9NWQ4|CN118_HUMAN Uncharacterized protein C14orf118 OS=Homo sapiens
Align length 52
Score (bit) 29.6
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912301|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_D12.
(507 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9NWQ4|CN118_HUMAN Uncharacterized protein C14orf118 OS=Homo ... 30 8.4
sp|Q9LV85|CPR5_ARATH Protein CPR-5 OS=Arabidopsis thaliana GN=CP... 30 8.6

>sp|Q9NWQ4|CN118_HUMAN Uncharacterized protein C14orf118 OS=Homo
sapiens GN=C14orf118 PE=1 SV=2
Length = 453

Score = 29.6 bits (65), Expect = 8.4
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3

Query: 187 SLASAHMNHLVSSY*LHRKMPHGLFFDLQTIMLSIQCSPCAPF-PVMFLPLL 35
+L + ++H++ + +++ L L +++ + PC PF P MFLP+L
Sbjct: 334 TLGTERISHIIVTLGRKKRIKRWLLIFLTFLLVHMSSIPCLPFTPWMFLPML 385


>sp|Q9LV85|CPR5_ARATH Protein CPR-5 OS=Arabidopsis thaliana GN=CPR5
PE=1 SV=1
Length = 564

Score = 29.6 bits (65), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +1

Query: 370 LPPSL*IQNAITSP-----EHLPGNIHKSQSLLDERRK 468
LPPS QN IT+P H G++HK ++++ +++K
Sbjct: 6 LPPSPEPQNQITNPANSKPNHQSGDVHKDETMMMKKKK 43


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912301|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_D12.
(507 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******