BP912302
Clone id YMU001_000017_E01
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGACAATATTGTATCACTGGCACAAGGAGCCATAGTGGCTTCATCCCAAATAGCTTAGCT
GGCTTAGCAAGTTTCATTAACCCATCAATCGAAGATTATCCACTCTAATTTTACTAAAAA
ATTCTGGAGTTCCCTTCCTTTGTCTCTGCTCGAAGCCATATTCCTAGGGGTTGACCTAGG
GCACTTAGAAGCAGCCCAAATGCACTTAAATGCAACAAAGATTTGTATGTTCCCTTGGCT
TGTATGTAACCCATCCAATCTCTATTCAAAAAAGTGAAATCTTCTGCTTCCCTTGATACC
TGGCATACAACTAGTATTTGTTACATGATATTGGACATTACTGGAGCTTGGTAAGATGTG
CACCTTCATACATATACACATATTTCATGACACACACGCGTGCGCATGAAATCTGGTTAT
AAGATAAGAATGATCACTAATTATGCACATACAAAAAAGTGCAAATAAGTAACAAGACAT
TCGAACAAGGAATAACATGACAAACAATGAGAAGCATACGCTGA
■■Homology search results ■■ -
sp_hit_id Q19061
Definition sp|Q19061|SRD59_CAEEL Serpentine receptor class delta-59 OS=Caenorhabditis elegans
Align length 99
Score (bit) 32.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912302|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_E01.
(524 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q19061|SRD59_CAEEL Serpentine receptor class delta-59 OS=Caen... 32 1.8
sp|Q95J56|DJC14_BOVIN DnaJ homolog subfamily C member 14 OS=Bos ... 31 4.1
sp|Q6Y2X3|DJC14_HUMAN DnaJ homolog subfamily C member 14 OS=Homo... 30 7.0

>sp|Q19061|SRD59_CAEEL Serpentine receptor class delta-59
OS=Caenorhabditis elegans GN=srd-59 PE=2 SV=2
Length = 325

Score = 32.0 bits (71), Expect = 1.8
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = -3

Query: 495 LFLVRMSCYLFALFCMCIISDHSYLITRFHAHACVS*NMCICMKVHILPSSSNVQYHV-- 322
+FL SC AL +S H L+T + A +S C ++ P++ + YHV
Sbjct: 47 IFLYNTSCVQIALITFAFLSQHR-LLTNSISAAVLSLGPC----SYVSPTTCFINYHVFM 101

Query: 321 -TNTSCMPGIKGSRRFHFFE*RLDGLHTSQGNIQIFVAF 208
T+ I + F FF + +HT+Q I + ++
Sbjct: 102 ATSFGAGSAIAITVLFRFFVLVQNQVHTNQTYIMVLASY 140


>sp|Q95J56|DJC14_BOVIN DnaJ homolog subfamily C member 14 OS=Bos
taurus GN=DNAJC14 PE=1 SV=1
Length = 699

Score = 30.8 bits (68), Expect = 4.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3

Query: 372 CMKVHILPSSSNVQYHVTNTSCMPGIKGSRR 280
C +V I P + V YH++ S MPG G +R
Sbjct: 600 CQRVGISPDTHRVPYHISFGSRMPGTSGRQR 630


>sp|Q6Y2X3|DJC14_HUMAN DnaJ homolog subfamily C member 14 OS=Homo
sapiens GN=DNAJC14 PE=2 SV=2
Length = 702

Score = 30.0 bits (66), Expect = 7.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3

Query: 372 CMKVHILPSSSNVQYHVTNTSCMPGIKGSRR 280
C +V I P + V YH++ S +PG +G +R
Sbjct: 603 CQRVGISPDTHRVPYHISFGSRIPGTRGRQR 633


tr_hit_id B6PTE1
Definition tr|B6PTE1|B6PTE1_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 69
Score (bit) 35.4
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912302|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_E01.
(524 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6PTE1|B6PTE1_BRAFL Putative uncharacterized protein (Fragmen... 35 1.7

>tr|B6PTE1|B6PTE1_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_132823 PE=4 SV=1
Length = 354

Score = 35.4 bits (80), Expect = 1.7
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3

Query: 519 VCFSLFVMLFL-VRMSCYLFALFCMCIISDHSYLITRFHAHACVS*NMCICMKVHILPSS 343
VC ++ LFL V M CYLF CMC SYL + + +C+C V +L +
Sbjct: 207 VCMCCYLPLFLQVCMCCYLFLQVCMC-----SYLFLQVCMCCYLFLQVCMC-HVLLLYRT 260

Query: 342 SNVQYHVTN 316
+V HVT+
Sbjct: 261 RHVPVHVTS 269