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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912304
Clone id YMU001_000017_E03
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATTCGCGGCCGCGAATTTTGTTTTTATTGGTTATTAGATTCACTCAGGATTAGATATGGA
TTCATGATTAACCGTAGACATGTGAAAGAGTTGGATCTTTTTGAAAGTGAAAGAGGTTTT
TACCTCAAGGATATCAAAAATGGTGCAGGACGATTTTTGTGCCCAGGTTTTCTTTCCATG
GGATTGATAGTAGATACAGACGTTACAATGTTGTAGACCTTTGAGTCTCAGCAATACCAA
AAATGTGAAGGATGCTTTTAGTATCCAAATTTGTTGTGTCATTGTATCAGTAGTGCTTAC
ACTTATTACAGATGTTGCACATAACTTTGCACAGTCGTTCACCACCGGCAAGGGCGCAGC
CACATTGTCCTATCAGACTGATTGGCATCAGCCACATTCAAGTATGACACCTTTTAACAA
AAAGCTAGTATGGGTTTGATTGAACCTTGAACTAAGAAAATTCCTTCTGCCTGAGCCACT
TTGTAGCCGACCATATCTCTCCTTCTGTCACCGTGCAGCTGCCATGTGAT
■■Homology search results ■■ -
sp_hit_id Q5UP57
Definition sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
Align length 24
Score (bit) 29.6
E-value 8.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912304|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_E03.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeb...    30   8.5  

>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba
           polyphaga mimivirus GN=MIMI_L593 PE=1 SV=1
          Length = 242

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEFS 438
           H    VT GE W A  W R+++FS
Sbjct: 219 HAGMPVTSGEKWIANLWFRERKFS 242
tr_hit_id Q7XNS6
Definition tr|Q7XNS6|Q7XNS6_ORYSJ Os04g0346000 protein OS=Oryza sativa subsp. japonica
Align length 23
Score (bit) 45.4
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912304|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_E03.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XNS6|Q7XNS6_ORYSJ Os04g0346000 protein OS=Oryza sativa subs...    45   0.002
tr|Q01L65|Q01L65_ORYSA OSIGBa0111I14.1 protein OS=Oryza sativa G...    45   0.002
tr|A2XS30|A2XS30_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|A3C4P9|A3C4P9_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.039
tr|Q9ZW86|Q9ZW86_ARATH Putative uncharacterized protein At2g4308...    40   0.087
tr|Q9LSI6|Q9LSI6_ARATH Prolyl 4-hydroxylase alpha subunit-like p...    40   0.087
tr|Q8VZD7|Q8VZD7_ARATH AT3g28480/MFJ20_16 OS=Arabidopsis thalian...    40   0.087
tr|Q8L970|Q8L970_ARATH Prolyl 4-hydroxylase, putative OS=Arabido...    40   0.087
tr|Q53CF1|Q53CF1_DIACA Prolyl 4-hydroxylase OS=Dianthus caryophy...    40   0.087
tr|A2XCX2|A2XCX2_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.087
tr|Q84T04|Q84T04_ORYSJ Os03g0803500 protein OS=Oryza sativa subs...    39   0.11 
tr|B8ALR9|B8ALR9_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.11 
tr|B6ZN58|B6ZN58_TOBAC Type 2 proly 4-hydroxylase OS=Nicotiana t...    39   0.11 
tr|B6TAV1|B6TAV1_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1            39   0.11 
tr|B4FYU5|B4FYU5_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.11 
tr|A1WAZ0|A1WAZ0_ACISJ 2OG-Fe(II) oxygenase OS=Acidovorax sp. (s...    39   0.15 
tr|B7D709|B7D709_9BURK Procollagen-proline dioxygenase OS=Diapho...    39   0.15 
tr|B7FKS2|B7FKS2_MEDTR Putative uncharacterized protein OS=Medic...    39   0.15 
tr|A9RGM2|A9RGM2_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.15 
tr|Q8VZJ7|Q8VZJ7_ARATH Putative uncharacterized protein At4g3391...    39   0.19 
tr|B6TED5|B6TED5_MAIZE Prolyl 4-hydroxylase OS=Zea mays PE=2 SV=1      39   0.19 
tr|B7WSU2|B7WSU2_COMTE Procollagen-proline dioxygenase OS=Comamo...    38   0.25 
tr|Q9LSI5|Q9LSI5_ARATH Gb|AAF08583.1 OS=Arabidopsis thaliana PE=...    38   0.25 
tr|Q84W84|Q84W84_ARATH Putative prolyl 4-hydroxylase (Fragment) ...    38   0.25 
tr|Q5GAV6|Q5GAV6_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.25 
tr|Q5GAR8|Q5GAR8_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.25 
tr|Q338D2|Q338D2_ORYSJ Prolyl 4-hydroxylase, putative, expressed...    38   0.25 
tr|Q1XG55|Q1XG55_CRYJA Putative prolyl 4-hydroxylase, alpha subu...    38   0.25 
tr|Q109P7|Q109P7_ORYSJ Os10g0413500 protein OS=Oryza sativa subs...    38   0.25 
tr|B8BGT2|B8BGT2_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.25 

>tr|Q7XNS6|Q7XNS6_ORYSJ Os04g0346000 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0085H11.11 PE=2 SV=2
          Length = 267

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEF 441
           HG C V EGE WSATKW+RQKEF
Sbjct: 244 HGGCPVLEGEKWSATKWMRQKEF 266


>tr|Q01L65|Q01L65_ORYSA OSIGBa0111I14.1 protein OS=Oryza sativa
           GN=OSIGBa0111I14.1 PE=4 SV=1
          Length = 267

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEF 441
           HG C V EGE WSATKW+RQKEF
Sbjct: 244 HGGCPVLEGEKWSATKWMRQKEF 266


>tr|A2XS30|A2XS30_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15426 PE=4 SV=1
          Length = 267

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEF 441
           HG C V EGE WSATKW+RQKEF
Sbjct: 244 HGGCPVLEGEKWSATKWMRQKEF 266


>tr|A3C4P9|A3C4P9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030271 PE=4 SV=1
          Length = 369

 Score = 40.8 bits (94), Expect = 0.039
 Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEFS*FKVQSNPY*LFVKRCHT*MWLMP-ISLIGQC---- 345
           HGSC V EG+ WSATKW+  + F     Q          C     L P  + +G+C    
Sbjct: 279 HGSCPVIEGQKWSATKWIHVRSFDISVKQG----ASTDGCEDENVLCPQWAAVGECAKNP 334

Query: 344 ----GCALAGGERLCKVMCNICNKCK 279
               G   A G   C+  CN+C  C+
Sbjct: 335 NYMVGTNEAPG--FCRKSCNVCAHCR 358


>tr|Q9ZW86|Q9ZW86_ARATH Putative uncharacterized protein At2g43080
           OS=Arabidopsis thaliana GN=At2g43080 PE=2 SV=1
          Length = 283

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEFS 438
           HG C V  GE WSATKW+RQK  S
Sbjct: 260 HGGCEVLSGEKWSATKWMRQKATS 283


>tr|Q9LSI6|Q9LSI6_ARATH Prolyl 4-hydroxylase alpha subunit-like
           protein OS=Arabidopsis thaliana PE=4 SV=1
          Length = 332

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEF 441
           HGSC V EGE WSAT+W+  K F
Sbjct: 258 HGSCPVVEGEKWSATRWIHVKSF 280


>tr|Q8VZD7|Q8VZD7_ARATH AT3g28480/MFJ20_16 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 316

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEF 441
           HGSC V EGE WSAT+W+  K F
Sbjct: 242 HGSCPVVEGEKWSATRWIHVKSF 264


>tr|Q8L970|Q8L970_ARATH Prolyl 4-hydroxylase, putative
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 316

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEF 441
           HGSC V EGE WSAT+W+  K F
Sbjct: 242 HGSCPVVEGEKWSATRWIHVKSF 264


>tr|Q53CF1|Q53CF1_DIACA Prolyl 4-hydroxylase OS=Dianthus
           caryophyllus GN=P4H1 PE=2 SV=1
          Length = 316

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEFS*FKVQSNP 414
           HGSC V EGE WSATKW+  + F   +    P
Sbjct: 241 HGSCPVIEGEKWSATKWIHVRSFDRIRKDDPP 272


>tr|A2XCX2|A2XCX2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10157 PE=4 SV=1
          Length = 321

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -2

Query: 509 HGSCTVTEGEIWSATKWLRQKEFS 438
           HGSC V EGE WSATKW+  + +S
Sbjct: 246 HGSCPVIEGEKWSATKWIHVRSYS 269