BP912306
Clone id YMU001_000017_E05
Library
Length 294
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATCATCCAGAATGCAAACCTTCATGACCGATATCTGCTCTTATAGTGATGAAGCTGAGCA
CAGACATGGCTCAGATGAGAACATAGCATCAGGACTTCAAAAGGAGCAAGCCAAGAGGAG
TGTATCTGCACTGTTACATAGTGCTGCAGGACCAGAGTTGAAGAAGTCTTTGCAGAAGTG
TGTGCAATTTGCGACATCTAGTCGTTGTGGGGATGCCGTGATTACATCAGGATTCAAGCT
TCCAGCGTCGCACATCACACATGCCATTGTACCGAAGTATCGAAGCTCTGAGAA
■■Homology search results ■■ -
sp_hit_id A7T167
Definition sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog OS=Nematostella vectensis
Align length 56
Score (bit) 47.4
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912306|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_E05.
(294 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog OS=Nematostella vect... 47 2e-05
sp|Q8Y3S3|Y2759_LISMO UPF0189 protein lmo2759 OS=Listeria monocy... 46 5e-05
sp|Q71W03|Y2748_LISMF UPF0189 protein LMOf2365_2748 OS=Listeria ... 46 5e-05
sp|Q66H63|GDAP2_RAT Ganglioside-induced differentiation-associat... 46 6e-05
sp|Q9DBL2|GDAP2_MOUSE Ganglioside-induced differentiation-associ... 46 6e-05
sp|Q4R678|GDAP2_MACFA Ganglioside-induced differentiation-associ... 46 6e-05
sp|Q9NXN4|GDAP2_HUMAN Ganglioside-induced differentiation-associ... 46 6e-05
sp|Q2KIX2|GDAP2_BOVIN Ganglioside-induced differentiation-associ... 46 6e-05
sp|Q9HJ67|Y1105_THEAC UPF0189 protein Ta1105 OS=Thermoplasma aci... 45 1e-04
sp|Q926Y8|Y2902_LISIN UPF0189 protein lin2902 OS=Listeria innocu... 44 2e-04
sp|Q66HX8|GDAP2_DANRE Ganglioside-induced differentiation-associ... 43 5e-04
sp|Q5CZL1|GDAP2_XENTR Ganglioside-induced differentiation-associ... 42 7e-04
sp|Q7JUR6|GDAP2_DROME Protein GDAP2 homolog OS=Drosophila melano... 42 0.001
sp|Q5XGM5|GDAP2_XENLA Ganglioside-induced differentiation-associ... 42 0.001
sp|Q8PHB6|Y3343_XANAC UPF0189 protein XAC3343 OS=Xanthomonas axo... 41 0.002
sp|Q985D2|Y7730_RHILO UPF0189 protein mll7730 OS=Rhizobium loti ... 41 0.002
sp|Q9HXU7|Y3693_PSEAE UPF0189 protein PA3693 OS=Pseudomonas aeru... 41 0.002
sp|Q8Y2K1|Y334_RALSO UPF0189 protein RSc0334 OS=Ralstonia solana... 40 0.003
sp|Q8P5Z8|Y3184_XANCP UPF0189 protein XCC3184 OS=Xanthomonas cam... 40 0.003
sp|Q8Q0F9|Y177_METMA UPF0189 protein MM_0177 OS=Methanosarcina m... 40 0.004
sp|Q2EMV9|PAR14_MOUSE Poly [ADP-ribose] polymerase 14 OS=Mus mus... 40 0.005
sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sa... 39 0.008
sp|Q292F9|GDAP2_DROPS Protein GDAP2 homolog OS=Drosophila pseudo... 39 0.008
sp|Q8RHQ2|Y1951_FUSNN UPF0189 protein FN1951 OS=Fusobacterium nu... 39 0.010
sp|P67341|YMDB_SALTY UPF0189 protein ymdB OS=Salmonella typhimur... 38 0.014
sp|P67342|YMDB_SALTI UPF0189 protein ymdB OS=Salmonella typhi GN... 38 0.014
sp|P0A8D6|YMDB_ECOLI UPF0189 protein ymdB OS=Escherichia coli (s... 37 0.030
sp|P0A8D7|YMDB_ECOL6 UPF0189 protein ymdB OS=Escherichia coli O6... 37 0.030
sp|P0A8D8|YMDB_ECO57 UPF0189 protein ymdB OS=Escherichia coli O1... 37 0.030
sp|Q44020|YGB2_RALEU UPF0189 protein in gbd 3'region OS=Ralstoni... 37 0.030

>sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog OS=Nematostella
vectensis GN=gdap2 PE=3 SV=1
Length = 502

Score = 47.4 bits (111), Expect = 2e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2

Query: 119 SVSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRS 286
++S +H AAGPEL +Q+C Q R G+A I+ G+ LPA ++ H + P+Y +
Sbjct: 81 ALSERVHRAAGPEL---MQECRQQLLGCRTGEAKISEGYNLPARYVIHTVGPRYNT 133


>sp|Q8Y3S3|Y2759_LISMO UPF0189 protein lmo2759 OS=Listeria
monocytogenes GN=lmo2759 PE=3 SV=1
Length = 176

Score = 46.2 bits (108), Expect = 5e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H AAGP+L K Q+ + S G+AVITS L A++I HA+ P ++ E
Sbjct: 32 VDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGE 88


>sp|Q71W03|Y2748_LISMF UPF0189 protein LMOf2365_2748 OS=Listeria
monocytogenes serotype 4b (strain F2365)
GN=LMOf2365_2748 PE=3 SV=1
Length = 176

Score = 46.2 bits (108), Expect = 5e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H AAGP+L K Q+ + + G+AVITS L AS+I HA+ P ++ E
Sbjct: 32 VDGAIHQAAGPDLLKECQEVINRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGE 88


>sp|Q66H63|GDAP2_RAT Ganglioside-induced
differentiation-associated-protein 2 OS=Rattus
norvegicus GN=Gdap2 PE=2 SV=1
Length = 497

Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2

Query: 113 KRSVSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRS 286
K VS + AGP+LK+ LQK R G+A +T GF L A I H + PKY+S
Sbjct: 82 KNPVSESIFMLAGPDLKEDLQKL----KGCRTGEAKLTKGFNLAARFIIHTVGPKYKS 135


>sp|Q9DBL2|GDAP2_MOUSE Ganglioside-induced
differentiation-associated protein 2 OS=Mus musculus
GN=Gdap2 PE=2 SV=1
Length = 498

Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2

Query: 113 KRSVSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRS 286
K VS + AGP+LK+ LQK R G+A +T GF L A I H + PKY+S
Sbjct: 82 KNPVSESIFMLAGPDLKEDLQKL----KGCRTGEAKLTKGFNLAARFIIHTVGPKYKS 135


>sp|Q4R678|GDAP2_MACFA Ganglioside-induced
differentiation-associated protein 2 OS=Macaca
fascicularis GN=GDAP2 PE=2 SV=1
Length = 461

Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2

Query: 113 KRSVSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRS 286
K VS + AGP+LK+ LQK R G+A +T GF L A I H + PKY+S
Sbjct: 46 KNPVSESIFMLAGPDLKEDLQKL----KGCRTGEAKLTKGFNLAARFIIHTVGPKYKS 99


>sp|Q9NXN4|GDAP2_HUMAN Ganglioside-induced
differentiation-associated protein 2 OS=Homo sapiens
GN=GDAP2 PE=2 SV=1
Length = 497

Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2

Query: 113 KRSVSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRS 286
K VS + AGP+LK+ LQK R G+A +T GF L A I H + PKY+S
Sbjct: 82 KNPVSESIFMLAGPDLKEDLQKL----KGCRTGEAKLTKGFNLAARFIIHTVGPKYKS 135


>sp|Q2KIX2|GDAP2_BOVIN Ganglioside-induced
differentiation-associated protein 2 OS=Bos taurus
GN=GDAP2 PE=2 SV=1
Length = 497

Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2

Query: 113 KRSVSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRS 286
K VS + AGP+LK+ LQK R G+A +T GF L A I H + PKY+S
Sbjct: 82 KNPVSESIFMLAGPDLKEDLQKL----RGCRTGEAKLTKGFNLAARFIIHTVGPKYKS 135


>sp|Q9HJ67|Y1105_THEAC UPF0189 protein Ta1105 OS=Thermoplasma
acidophilum GN=Ta1105 PE=3 SV=2
Length = 196

Score = 44.7 bits (104), Expect = 1e-04
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKC--VQFATSSRCGDAVITSGFKLPASHITHAIVP 274
V +HSAAGPEL L K ++ G+AVIT G++L ASHI H + P
Sbjct: 40 VDGAIHSAAGPELNGELVKIRRERYPNGLPPGEAVITRGYRLKASHIIHTVGP 92


>sp|Q926Y8|Y2902_LISIN UPF0189 protein lin2902 OS=Listeria innocua
GN=lin2902 PE=3 SV=1
Length = 176

Score = 44.3 bits (103), Expect = 2e-04
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H AAGP+L K Q+ + S G+AVITS L A I HA+ P ++ E
Sbjct: 32 VDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKAHFIIHAVGPIWKDGE 88


tr_hit_id A7Q3W6
Definition tr|A7Q3W6|A7Q3W6_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera
Align length 51
Score (bit) 48.9
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912306|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_E05.
(294 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7Q3W6|A7Q3W6_VITVI Chromosome chr13 scaffold_48, whole genom... 49 1e-04
tr|A5BMT8|A5BMT8_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04
tr|A8JDR4|A8JDR4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 47 6e-04
tr|A8NTS0|A8NTS0_COPC7 Putative uncharacterized protein OS=Copri... 47 6e-04
tr|Q4ETE4|Q4ETE4_LISMO Appr-1-p processing enzyme family OS=List... 46 8e-04
tr|Q4EIS5|Q4EIS5_LISMO Appr-1-p processing enzyme family OS=List... 46 8e-04
tr|B8DD54|B8DD54_LISMO Putative uncharacterized protein OS=Liste... 46 8e-04
tr|A4BUI3|A4BUI3_9GAMM Predicted phosphatase OS=Nitrococcus mobi... 46 0.001
tr|B6SKT6|B6SKT6_MAIZE Protein LRP16 OS=Zea mays PE=2 SV=1 46 0.001
tr|B4FEI6|B4FEI6_MAIZE Putative uncharacterized protein OS=Zea m... 46 0.001
tr|A9SAI9|A9SAI9_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001
tr|B8DKL2|B8DKL2_DESVM Appr-1-p processing domain protein OS=Des... 45 0.001
tr|B5WP68|B5WP68_9BURK Appr-1-p processing domain protein OS=Bur... 45 0.001
tr|Q8H114|Q8H114_ARATH Putative uncharacterized protein At2g4060... 45 0.001
tr|O22875|O22875_ARATH Expressed protein OS=Arabidopsis thaliana... 45 0.001
tr|B8LP86|B8LP86_PICSI Putative uncharacterized protein OS=Picea... 45 0.001
tr|Q949P6|Q949P6_ARATH Putative uncharacterized protein At2g4060... 45 0.002
tr|Q5R014|Q5R014_IDILO Predicted phosphatase OS=Idiomarina loihi... 45 0.002
tr|Q10LS7|Q10LS7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 45 0.002
tr|Q0DS32|Q0DS32_ORYSJ Os03g0336500 protein (Fragment) OS=Oryza ... 45 0.002
tr|B8AP03|B8AP03_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002
tr|B6T7H7|B6T7H7_MAIZE Protein LRP16 OS=Zea mays PE=2 SV=1 45 0.002
tr|A3AHQ1|A3AHQ1_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002
tr|Q2IP54|Q2IP54_ANADE Appr-1-p processing OS=Anaeromyxobacter d... 44 0.003
tr|Q218M4|Q218M4_RHOPB Appr-1-p processing OS=Rhodopseudomonas p... 44 0.003
tr|B8JDX0|B8JDX0_9DELT Appr-1-p processing domain protein OS=Ana... 44 0.003
tr|Q59Z15|Q59Z15_CANAL Putative uncharacterized protein OS=Candi... 44 0.003
tr|Q6N9E2|Q6N9E2_RHOPA Appr-1''-p processing enzyme family prote... 44 0.004
tr|B4UEE8|B4UEE8_ANASK Appr-1-p processing domain protein OS=Ana... 44 0.004
tr|B2SX20|B2SX20_BURPP Appr-1-p processing domain protein OS=Bur... 44 0.004

>tr|A7Q3W6|A7Q3W6_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029446001
PE=4 SV=1
Length = 190

Score = 48.9 bits (115), Expect = 1e-04
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +2

Query: 134 LHSAAGPELKKSLQKCVQFATSSRC--GDAVITSGFKLPASHITHAIVPKY 280
+H AAGPEL + K + RC G+A IT GFKLPA+H+ H + P Y
Sbjct: 53 IHRAAGPELVAACYKVPEVRPGIRCPTGEARITQGFKLPAAHVIHTVGPIY 103


>tr|A5BMT8|A5BMT8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_012577 PE=4 SV=1
Length = 231

Score = 48.9 bits (115), Expect = 1e-04
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +2

Query: 134 LHSAAGPELKKSLQKCVQFATSSRC--GDAVITSGFKLPASHITHAIVPKY 280
+H AAGPEL + K + RC G+A IT GFKLPA+H+ H + P Y
Sbjct: 94 IHRAAGPELVAACYKVPEVRPGIRCPTGEARITQGFKLPAAHVIHTVGPIY 144


>tr|A8JDR4|A8JDR4_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_107313 PE=4
SV=1
Length = 144

Score = 46.6 bits (109), Expect = 6e-04
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRC--GDAVITSGFKLPASHITHAIVPKYRS 286
V +H AGP+L ++ + + RC G+A IT GFKL A H+ H + P YRS
Sbjct: 39 VDGAIHKTAGPQLLEACRAVPEVEPDVRCPTGEARITPGFKLKARHVIHTVGPVYRS 95


>tr|A8NTS0|A8NTS0_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_06374 PE=4 SV=1
Length = 251

Score = 46.6 bits (109), Expect = 6e-04
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H+AAGP+L L +C Q +R G++ IT G+ LPA H+ H + P Y +S+
Sbjct: 107 VDGAIHAAAGPKL---LAECKQL-NGARTGESKITRGYDLPARHVIHTVGPVYNASQ 159


>tr|Q4ETE4|Q4ETE4_LISMO Appr-1-p processing enzyme family
OS=Listeria monocytogenes str. 1/2a F6854
GN=LMOf6854_2878 PE=4 SV=1
Length = 176

Score = 46.2 bits (108), Expect = 8e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H AAGP+L K Q+ + S G+AVITS L A++I HA+ P ++ E
Sbjct: 32 VDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGE 88


>tr|Q4EIS5|Q4EIS5_LISMO Appr-1-p processing enzyme family
OS=Listeria monocytogenes str. 4b H7858 GN=LMOh7858_3025
PE=4 SV=1
Length = 176

Score = 46.2 bits (108), Expect = 8e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H AAGP+L K Q+ + + G+AVITS L AS+I HA+ P ++ E
Sbjct: 32 VDGAIHQAAGPDLLKECQEVINRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGE 88


>tr|B8DD54|B8DD54_LISMO Putative uncharacterized protein OS=Listeria
monocytogenes HCC23 GN=LMHCC_2765 PE=4 SV=1
Length = 176

Score = 46.2 bits (108), Expect = 8e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V +H AAGP+L K Q+ + + G+AVITS L AS+I HA+ P ++ E
Sbjct: 32 VDGAIHQAAGPDLLKECQEVINRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGE 88


>tr|A4BUI3|A4BUI3_9GAMM Predicted phosphatase OS=Nitrococcus mobilis
Nb-231 GN=NB231_02233 PE=4 SV=1
Length = 179

Score = 45.8 bits (107), Expect = 0.001
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRCGDAVITSGFKLPASHITHAIVPKYRSSE 292
V+ +H+AAGPEL + R GDAVITSG +LP +HI H + P Y E
Sbjct: 40 VAGAIHAAAGPELAAECRPLAPI----RPGDAVITSGQRLPNTHIIHCLGPVYGRDE 92


>tr|B6SKT6|B6SKT6_MAIZE Protein LRP16 OS=Zea mays PE=2 SV=1
Length = 239

Score = 45.8 bits (107), Expect = 0.001
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRC--GDAVITSGFKLPASHITHAIVPKY 280
V +H AAGPEL ++ +K + RC G+A IT F+LPAS + H + P Y
Sbjct: 95 VDGAIHQAAGPELVQACRKVPEVKPGVRCPTGEARITPAFELPASRVIHTVGPIY 149


>tr|B4FEI6|B4FEI6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 200

Score = 45.8 bits (107), Expect = 0.001
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2

Query: 122 VSALLHSAAGPELKKSLQKCVQFATSSRC--GDAVITSGFKLPASHITHAIVPKY 280
V +H AAGPEL ++ +K + RC G+A IT F+LPAS + H + P Y
Sbjct: 56 VDGAIHQAAGPELVQACRKVPEVKPGVRCPTGEARITPAFELPASRVIHTVGPIY 110