BP912313
Clone id YMU001_000017_F03
Library
Length 284
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATAAGGCTGATTCATATGCACATAACAGCCCCAGCTCCTCCAAGCTATAAAGCACACAT
CCATGCAGCTTCTTAAGCTTCCTACAAAGCTTCTTGTTCAGCTCCTCTACATCCTTGAAA
CCATCACTGTTTACCACAGCAGATTCATACATGCCCTCATATTTACCCAGTAACGCATTC
CAGCTGTTGAAGCACACCGTGTAAACAGTGTGGGGGTGGTGAAAACCATCGAATATTTTG
ATTGGGTGTGGGCACATAATTCTTAACCTCCTGATCATCCTCCA
■■Homology search results ■■ -
sp_hit_id A5EMM2
Definition sp|A5EMM2|GCSP_BRASB Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Align length 35
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912313|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_F03.
(284 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5EMM2|GCSP_BRASB Glycine dehydrogenase [decarboxylating] OS=... 29 6.3

>sp|A5EMM2|GCSP_BRASB Glycine dehydrogenase [decarboxylating]
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=gcvP PE=3 SV=1
Length = 957

Score = 29.3 bits (64), Expect = 6.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -1

Query: 221 HHPHTVYTVCFNSWNALLGKYEGMYESAVVNSDGF 117
H PHTV+ + + WN + + EG + +D +
Sbjct: 892 HAPHTVHDIADDDWNRVYRRSEGCFPEGTSRTDKY 926


tr_hit_id A7P4V9
Definition tr|A7P4V9|A7P4V9_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 52
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912313|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_F03.
(284 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P4V9|A7P4V9_VITVI Chromosome chr4 scaffold_6, whole genome ... 34 4.2
tr|A5C7D6|A5C7D6_VITVI Putative uncharacterized protein OS=Vitis... 34 4.2
tr|B6HFP5|B6HFP5_PENCH Pc20g03140 protein (Fragment) OS=Penicill... 33 7.2

>tr|A7P4V9|A7P4V9_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032302001
PE=4 SV=1
Length = 1593

Score = 33.9 bits (76), Expect = 4.2
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1

Query: 149 YESAVVNSDG-----FKDVEEXXXXXXXXXXXLHGCVLYSLEELGLLCAYES 9
+++ ++N G +KD+++ H +LY L++LGL+CAYE+
Sbjct: 216 FDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEA 267


>tr|A5C7D6|A5C7D6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035236 PE=4 SV=1
Length = 2076

Score = 33.9 bits (76), Expect = 4.2
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1

Query: 149 YESAVVNSDG-----FKDVEEXXXXXXXXXXXLHGCVLYSLEELGLLCAYES 9
+++ ++N G +KD+++ H +LY L++LGL+CAYE+
Sbjct: 1264 FDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEA 1315


>tr|B6HFP5|B6HFP5_PENCH Pc20g03140 protein (Fragment) OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc20g03140 PE=4 SV=1
Length = 269

Score = 33.1 bits (74), Expect = 7.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1

Query: 230 DGFHHPHTVYTVCFNSWNALLGKYEGMYESAVVNS 126
+GF HP + VC++ + A +Y G YE + +
Sbjct: 149 EGFQHPQLKFAVCYSGFRAPGARYRGFYEEPAIQT 183