BP912318 |
Clone id |
YMU001_000017_F09 |
Library |
YMU01 |
Length |
522 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000017_F09. |
Accession |
BP912318 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL803Contig1 |
Sequence |
CTGGAAGAATTCGCTAGTGGTTTCATCTGCCGATGTTTCCAGATTCATTTGCTTCTGCTT GCCAATCCTCATGTCGTAGTAGATTGTCTCCCCTTTCTTACCGGTCATGCGTAGAAGGCC AGTACCCCAGTCCTGTTTTGCCTTCATGGCCATCAACCATGGCCTTCCCAAAATTAGTGG ATAGCTCTCCCCCTTAGTAGGCATCACAAAAACATCTACCTCTACCTCAATGTTGAAAGC TTTGATTTTCACGGAACTTACCACACCCACACACTTAACTTTTGCGTTGTTTGCCATCTT TGCCTTGCATGGAGAAGGTCTGTCAACCTCGAGCCCTAATCGAAGCATCATAGCTCCGCT CATTACACAGATTTGTGCACCTCCATCAATGTAGGTGTTTCCAACCCTCTTTCCTTTTAT GTTTACGTCGACAATTGGAAAGATGTCATCCATGTTGCATCCCAAAATTGCTCCGGCTAC CTTTGTTTTGGAGCGTCTTGTACTTACCATTCTAGACCATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P74591 |
Definition |
sp|P74591|AROE_SYNY3 Shikimate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) |
Align length |
36 |
Score (bit) |
32.0 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5C307 |
Definition |
tr|A5C307|A5C307_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
145 |
Score (bit) |
51.6 |
E-value |
2.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912318|Adiantum capillus-veneris mRNA, clone: YMU001_000017_F09. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5C307|A5C307_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5AWS0|A5AWS0_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|Q2R8K8|Q2R8K8_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04 tr|A5C960|A5C960_VITVI Putative uncharacterized protein OS=Vitis... 47 7e-04 tr|A7PBW0|A7PBW0_VITVI Chromosome chr2 scaffold_11, whole genome... 45 0.002 tr|A5B1Y9|A5B1Y9_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|Q7XRT2|Q7XRT2_ORYSJ OSJNBa0042F21.11 protein OS=Oryza sativa ... 45 0.002 tr|A5BYG3|A5BYG3_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5BXX1|A5BXX1_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5B1N0|A5B1N0_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5AV42|A5AV42_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A7R2I7|A7R2I7_VITVI Chromosome undetermined scaffold_430, who... 45 0.003 tr|A5C3F3|A5C3F3_VITVI Putative uncharacterized protein OS=Vitis... 45 0.003 tr|A5C892|A5C892_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|A5BKJ5|A5BKJ5_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|A5BCK1|A5BCK1_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|A5B1Q2|A5B1Q2_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|A5AUV9|A5AUV9_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|Q6UUE9|Q6UUE9_ORYSJ Putative uncharacterized protein (Putativ... 44 0.005 tr|A5C596|A5C596_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005 tr|A5BFC1|A5BFC1_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005 tr|A5AGJ4|A5AGJ4_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005 tr|A5C652|A5C652_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|A5C3J0|A5C3J0_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|A5BYC4|A5BYC4_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|A5BXB8|A5BXB8_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|A5BWJ0|A5BWJ0_VITVI Putative uncharacterized protein (Fragmen... 44 0.006 tr|A5BVD4|A5BVD4_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|A5BIH2|A5BIH2_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006
>tr|A5C307|A5C307_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031539 PE=4 SV=1 Length = 614
Score = 51.6 bits (122), Expect = 2e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 10/145 (6%) Frame = -1
Query: 493 VSTRRSKTKVAGAILGCNM-----DDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMML 329 V+ + T+ AI+ C D +PI+ V I+GK V ++ GA + ++S ++ Sbjct: 327 VNKKAFLTEQVSAIIQCKSPVKYKDSGYPIISVMIRGKLVKKALLNLGASVNLLSYSVYK 386
Query: 328 RLGLEVDRPSPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT----KGESY-P 164 +LGL +P+ + + + + N VD V+ T KG +Y P Sbjct: 387 KLGLGELKPTSITLSLVDRSVKIPRGMIEDVLVQVDNFYYLVDFVVLDTNPIVKGTNYVP 446
Query: 163 LILGRPWLMAMKAKQDWGTGLLRMT 89 +ILGRP+L A D GL+++T Sbjct: 447 IILGRPFLATSNAIIDCRNGLMQLT 471
>tr|A5AWS0|A5AWS0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037987 PE=4 SV=1 Length = 1633
Score = 48.9 bits (115), Expect = 1e-04 Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%) Frame = -1
Query: 493 VSTRRSKTKVAGAILGCNM-----DDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMML 329 V+ + TK AI+ C D P + VNI GK V +D GA + ++ ++ Sbjct: 423 VNKKAFLTKQVSAIIQCKSPLKYKDSGCPTISVNIGGKVVEKALLDLGASVNLIRYSIYK 482
Query: 328 RLGLEVDRPSPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT----KGESY-P 164 +LGL +P+ +A+ + + N VD V+ T K +Y P Sbjct: 483 QLGLGELKPTSITLSLADRSVKIPRGIIEDVLVQVDNFYYPVDFVVLDTDPLVKEANYVP 542
Query: 163 LILGRPWLMAMKAKQDWGTGLLRMT 89 +ILGRP+L KA + GL+++T Sbjct: 543 IILGRPFLATSKAIINCRNGLMQLT 567
>tr|Q2R8K8|Q2R8K8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g11840 PE=4 SV=1 Length = 491
Score = 48.5 bits (114), Expect = 2e-04 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Frame = -1
Query: 424 PIVDVNIKGKRVGNTYIDGGAQICVMSGAMMLRLGLEVDRPSPCKAKMANNAXXXXXXXX 245 P + +I+ ++ D GA + VM + +L V P+P + ++AN++ Sbjct: 280 PTITCSIEAQQFDQALCDLGASVSVMPKDVFDKLNFTVLTPTPMRLQLANSSVRYPAGIA 339
Query: 244 XXXXXKAFNIEVEVDVFVMPTK-GESYPLILGRPWLMAMKAKQDWGTGLLRM 92 K + + VD V+ G+ PLILGRP+L + A D GTG +R+ Sbjct: 340 EDVPVKIRDFFIPVDFVVLDMDTGKEKPLILGRPFLSTVGANIDVGTGSIRL 391
>tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018387 PE=4 SV=1 Length = 1554
Score = 47.0 bits (110), Expect = 5e-04 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 10/145 (6%) Frame = -1
Query: 493 VSTRRSKTKVAGAILGCNM-----DDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMML 329 V+ + T+ AIL C D PI+ V I GK V +D GA + ++S ++ Sbjct: 435 VNKKAFLTEQVSAILQCKSPLKYKDPGSPIISVMIGGKVVEKALLDLGASVNLLSYSIYK 494
Query: 328 RLGLEVDRPSPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT-----KGESYP 164 +LGL +P+ +A+ + + N VD V+ T + P Sbjct: 495 QLGLGELKPTTITLSLADRSVKIPRGVIEDVLVQVDNFYYPVDFIVLDTDPTVKEANLVP 554
Query: 163 LILGRPWLMAMKAKQDWGTGLLRMT 89 +ILGRP+L A + GL+++T Sbjct: 555 IILGRPFLATSNAIINCRNGLMQLT 579
>tr|A5C960|A5C960_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022527 PE=4 SV=1 Length = 2166
Score = 46.6 bits (109), Expect = 7e-04 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 10/145 (6%) Frame = -1
Query: 493 VSTRRSKTKVAGAILGCNM-----DDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMML 329 V+ + T+ AI+ C D P + V I GK V ++D GA + ++ ++ Sbjct: 518 VNKKTFLTEQVSAIIQCKSPLKYKDPGCPTISVMIGGKVVEKAFLDLGASVNLLPYSVYK 577
Query: 328 RLGLEVDRPSPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT-----KGESYP 164 +LGL +P+ +++ + + N VD FV+ T + S P Sbjct: 578 KLGLGELKPTSITLSLSDRSMKIPRGIIEDVLVQVDNFYYPVDFFVLDTDPTVKEANSVP 637
Query: 163 LILGRPWLMAMKAKQDWGTGLLRMT 89 +ILG+P+L A + GL+++T Sbjct: 638 IILGKPFLATSNAIINCRNGLMQLT 662
>tr|A7PBW0|A7PBW0_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015578001 PE=4 SV=1 Length = 485
Score = 45.4 bits (106), Expect = 0.002 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 5/136 (3%) Frame = -1
Query: 481 RSKTKVAGAILGCNMDDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMMLRLGLEVDRP 302 +SK+ V LGC P + VNI G V +D GA + ++ ++ +LGL +P Sbjct: 229 QSKSPVKYKDLGC------PTISVNIGGTHVEKALLDLGASVNLLPYSIYKQLGLRGLKP 282
Query: 301 SPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT----KGESY-PLILGRPWLM 137 + +A+ + + VD V+ T K E+Y P+ILGRP+L Sbjct: 283 TTMTLSLADRSVKIPRGVIEDVLVQVDKFYYLVDFVVLDTDSTIKEENYVPIILGRPFLA 342
Query: 136 AMKAKQDWGTGLLRMT 89 A ++ G++++T Sbjct: 343 TSNAIINFRNGVMQLT 358
>tr|A5B1Y9|A5B1Y9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030024 PE=4 SV=1 Length = 1095
Score = 45.4 bits (106), Expect = 0.002 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Frame = -1
Query: 451 LGCNMDDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMMLRLGLEVDRPSPCKAKMANN 272 LGC P + V I GK V T +D GA + ++ ++ +LGL +P+ +A+ Sbjct: 49 LGC------PTISVMIGGKVVEKTLLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADR 102
Query: 271 AXXXXXXXXXXXXXKAFNIEVEVDVFVMPT----KGESY-PLILGRPWLMAMKAKQDWGT 107 + + N VD V+ T K +Y P+ILGRP+L KA + Sbjct: 103 SVKIPRGIIEDVLVQVDNFYYPVDFVVLDTDPLVKEANYVPIILGRPFLATSKAIINCRN 162
Query: 106 GLLRMT 89 GL+++T Sbjct: 163 GLMQLT 168
>tr|Q7XRT2|Q7XRT2_ORYSJ OSJNBa0042F21.11 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0042F21.11 PE=4 SV=2 Length = 920
Score = 45.1 bits (105), Expect = 0.002 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Frame = -1
Query: 424 PIVDVNIKGKRVGNTYIDGGAQICVMSGAMMLRLGLEVDRPSPCKAKMANNAXXXXXXXX 245 P + +I ++ D GA + VM + +L V P+P + ++A+++ Sbjct: 760 PTITCSIGAQQFDQALCDLGASVSVMPKDVFDKLNFTVLAPTPMRLQLADSSVHYPVGIA 819
Query: 244 XXXXXKAFNIEVEVDVFVMPTK-GESYPLILGRPWLMAMKAKQDWGTGLLRM-TGKKGET 71 K + + VD V+ G+ PLILGRP+L A D GTG +R T K E Sbjct: 820 EDVPAKIRDFFIPVDFVVLDMDTGKETPLILGRPFLSTAGANIDVGTGSIRFHTNGKEEK 879
Query: 70 IYYDMRI 50 + R+ Sbjct: 880 FEFQPRM 886
>tr|A5BYG3|A5BYG3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025288 PE=4 SV=1 Length = 860
Score = 45.1 bits (105), Expect = 0.002 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 10/145 (6%) Frame = -1
Query: 493 VSTRRSKTKVAGAILGCNM-----DDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMML 329 V+ + T+ AIL C D P + V I GK V +D GA + ++ ++ Sbjct: 450 VNKKAFLTEQVSAILQCKSPLKYKDPRSPTISVMIGGKVVEKALLDLGASVNLLPYSVYK 509
Query: 328 RLGLEVDRPSPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT-----KGESYP 164 +LGL +P+ +A+ + + N VD V+ T + P Sbjct: 510 QLGLGELKPTTITLSLADRSVKIPRGVIEDVLVQVDNFYYPVDFIVLDTDPTVKEANLVP 569
Query: 163 LILGRPWLMAMKAKQDWGTGLLRMT 89 +ILGRP+L A ++ GL+++T Sbjct: 570 IILGRPFLATSNAIINYRNGLMQLT 594
>tr|A5BXX1|A5BXX1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010027 PE=4 SV=1 Length = 1254
Score = 45.1 bits (105), Expect = 0.002 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Frame = -1
Query: 493 VSTRRSKTKVAGAILGCNM-----DDIFPIVDVNIKGKRVGNTYIDGGAQICVMSGAMML 329 V+ + T+ AIL C D P + V I GK V +D GA + ++ ++ Sbjct: 496 VNKKAFLTEQVSAILQCKSPLKYKDPGSPTISVMIGGKVVEKALLDLGASVNLLPYSVYK 555
Query: 328 RLGLEVDRPSPCKAKMANNAXXXXXXXXXXXXXKAFNIEVEVDVFVMPT-----KGESYP 164 +LGL +P+ +AN + + N VD V+ T + P Sbjct: 556 QLGLGELKPTTITLSLANRSVKIPRGVIEDVLVQVDNFYYPVDFIVLDTDPTVKEANLVP 615
Query: 163 LILGRPWLMAMKAKQDWGTGLLRMT 89 +ILGRP+L A + GL+++T Sbjct: 616 IILGRPFLATSNAIINCRNGLMQLT 640
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