BP912326
Clone id YMU001_000017_G09
Library
Length 333
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTCTCTTCTTGAGCAACATGGCTGTACACTGACAACAGCTGCTCTAAGCAACTGGTACTG
CGGGCCTGCAAGAGTATGTGAACTGCAACCTCATGTAGCTGAGGAGTCTCTGCACCATAG
TCCTCCCAGCATAGTGCAGACCCTACCTCGAAAGCGGTCCAGCCAATCAAGCCAGTGCTC
CCCCTCTTCTCTCTGTAGATCTATAACTGGTTTGTGATTGTGCATGCACCTTAGGTCCTC
ATCCTTTGGGTAGAGTTTCTCCCGGAAGCCTTCCATGACTTCATCATCCTGTGTTTTCCT
CTACCTTGAAACTATGGATCTACCATAAAGGAA
■■Homology search results ■■ -
sp_hit_id P37317
Definition sp|P37317|VINT_BPSFV Integrase OS=Enterobacteria phage Sf6
Align length 26
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912326|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_G09.
(333 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P37317|VINT_BPSFV Integrase OS=Enterobacteria phage Sf6 GN=in... 30 3.8
sp|P37326|INTS_ECOLI Putative prophage CPS-53 integrase OS=Esche... 30 3.8
sp|Q9DBC0|SELO_MOUSE Selenoprotein O OS=Mus musculus GN=Selo PE=... 29 8.4

>sp|P37317|VINT_BPSFV Integrase OS=Enterobacteria phage Sf6 GN=int
PE=3 SV=1
Length = 385

Score = 30.0 bits (66), Expect = 3.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1

Query: 234 LRCMHNHKPVIDLQREEGEHWLDWLD 157
+R ++NH +D +RE + W DWLD
Sbjct: 356 VRGIYNHAQYLDKRREMMQWWADWLD 381


>sp|P37326|INTS_ECOLI Putative prophage CPS-53 integrase
OS=Escherichia coli (strain K12) GN=intS PE=3 SV=1
Length = 385

Score = 30.0 bits (66), Expect = 3.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1

Query: 234 LRCMHNHKPVIDLQREEGEHWLDWLD 157
+R ++NH +D +RE + W DWLD
Sbjct: 356 VRGIYNHAQYLDKRREMMQWWADWLD 381


>sp|Q9DBC0|SELO_MOUSE Selenoprotein O OS=Mus musculus GN=Selo PE=1
SV=3
Length = 667

Score = 28.9 bits (63), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1

Query: 201 DLQREEGEHWLDWLDRFRGRV 139
DLQR+ +HW WL +R R+
Sbjct: 547 DLQRKNRDHWEAWLQEYRDRL 567


tr_hit_id A7QTU3
Definition tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, whole genome shotgun sequence OS=Vitis vinifera
Align length 74
Score (bit) 38.1
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912326|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_G09.
(333 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, who... 38 0.22
tr|Q1ICQ1|Q1ICQ1_PSEE4 Aminopeptidase N OS=Pseudomonas entomophi... 36 0.85
tr|A3BRP1|A3BRP1_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.1
tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis... 35 1.9
tr|Q4ZVT4|Q4ZVT4_PSEU2 Peptidase M1, membrane alanine aminopepti... 33 9.4

>tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00006487001 PE=4 SV=1
Length = 633

Score = 38.1 bits (87), Expect = 0.22
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2

Query: 218 ITNQL*IYREKRGSTG--LIGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCL 45
ITNQ+ ++ G G L V L WE +G P L VA+ IL Q STS
Sbjct: 470 ITNQILLFTRATGMFGCNLAREARDTVPPGLWWEQFGDSAPVLQRVAIRILSQVCSTSTF 529

Query: 44 EQLLSVYSHVAQEE 3
E+ + + + E+
Sbjct: 530 ERHWNTFQQIHSEK 543


>tr|Q1ICQ1|Q1ICQ1_PSEE4 Aminopeptidase N OS=Pseudomonas entomophila
(strain L48) GN=pepN PE=4 SV=1
Length = 885

Score = 36.2 bits (82), Expect = 0.85
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1

Query: 225 MHNHKPVIDLQREEGEHWLDWLDRFRGRV---CTMLGGLWCRDSSAT 94
+ N PV D E+G HW W D F+ + G LWC +SS T
Sbjct: 162 LSNGNPVGDGPAEDGRHWATWEDPFKKPAYLFALVAGDLWCVESSFT 208


>tr|A3BRP1|A3BRP1_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_025713 PE=4 SV=1
Length = 361

Score = 35.8 bits (81), Expect = 1.1
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2

Query: 128 WEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHV 15
W YG+ETP+L EVA +L Q S+S E++ Y +
Sbjct: 274 WCSYGSETPELAEVAKRVLSQPISSSSAERIWGTYQFI 311


>tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003006 PE=4 SV=1
Length = 635

Score = 35.0 bits (79), Expect = 1.9
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Frame = -2

Query: 329 FMVDP*FQGRGKHR---MMKSWKAS-----GRNSTQRMRT*GACTITNQL*IYREKRGST 174
++++P + G+G+ + +M+ WKA+ ++T+R+ + QL Y GS
Sbjct: 457 YILNPKYFGKGQSKDKTIMRGWKATLDRYESDSATRRV-------LREQLSSYWRLEGSF 509

Query: 173 GLIGWTAF--EVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQ 39
G ++ WE++G ETP L +A+ IL Q S S ++
Sbjct: 510 GEEDAVDCRDKMDPVAWWENFGFETPHLQTLAIKILSQVSSVSMYQE 556


>tr|Q4ZVT4|Q4ZVT4_PSEU2 Peptidase M1, membrane alanine
aminopeptidase OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=Psyr_1690 PE=4 SV=1
Length = 888

Score = 32.7 bits (73), Expect = 9.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -1

Query: 225 MHNHKPVIDLQREEGEHWLDWLDRFRGRV---CTMLGGLWCRDSSAT 94
+ N PV + E+G HW W D F + G LWC + + T
Sbjct: 162 LSNGNPVASGEEEDGRHWATWEDPFMKPAYLFALVAGDLWCIEDTFT 208