BP912328 |
Clone id |
YMU001_000017_G12 |
Library |
YMU01 |
Length |
442 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000017_G12. |
Accession |
BP912328 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAAAAAAAGTGAGCTATTAGAAAAAGACAACGCAGGCAGTGATATAATGCGAGGGTTGCA TGTTGATGGTGCACATGAGGCTCGCAATTGCTGTTGACGCCAATGCGCGAGTGTAGGGCC CACCAAAATTGGTGTGGATGATGTTATATGTGACGTATTGCATGCAACCCTCTTAGTGTG AGGGTGTTTTACAAAAGGATAAGGCAGGGTGATGACACAACACTGCAACTCGGGTGCCGA TGAGCATCATAGATAACACTGGCCGTTCTGGTGGGCAAGACGGCTAGCAGGGCTGTTGTG GATAGTAGGCTCCTTATGATGTTGCCGATGGAGCCTTGGCGAGAATGGGAGGTAGGCTAA CTGGTGGGTAGATGAGGTAGGCTAACTTGGCGAGAATGGGAGGTAGGCTAACTGGTGGGT AGATGGGAGGTAGGCTAATTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O88563 |
Definition |
sp|O88563|MRP3_RAT Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus |
Align length |
34 |
Score (bit) |
31.2 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4I184 |
Definition |
tr|B4I184|B4I184_DROSE GM18501 OS=Drosophila sechellia |
Align length |
66 |
Score (bit) |
33.9 |
E-value |
4.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912328|Adiantum capillus-veneris mRNA, clone: YMU001_000017_G12. (442 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4I184|B4I184_DROSE GM18501 OS=Drosophila sechellia GN=GM1850... 34 4.1 tr|Q63N68|Q63N68_BURPS Putative O-acetyl transferase (O-antigen-... 33 5.4 tr|Q3JH33|Q3JH33_BURP1 Putative O-acetyl transferase (O-antigen-... 33 5.4 tr|A3P2Q4|A3P2Q4_BURP0 Putative lipopolysaccharide biosynthesis ... 33 5.4 tr|A3NH49|A3NH49_BURP6 Galactoside O-acetyltransferase OS=Burkho... 33 5.4 tr|B7CX35|B7CX35_BURPS Putative lipopolysaccharide biosynthesis ... 33 5.4 tr|B2KJA5|B2KJA5_BURPS Putative lipopolysaccharide biosynthesis ... 33 5.4 tr|B1N1L5|B1N1L5_BURPS Putative acetyltransferase OS=Burkholderi... 33 5.4 tr|A8KHI6|A8KHI6_BURPS Putative acetyltransferase OS=Burkholderi... 33 5.4 tr|A8EB87|A8EB87_BURPS Putative acetyltransferase OS=Burkholderi... 33 5.4 tr|A4LS99|A4LS99_BURPS Putative acetyltransferase OS=Burkholderi... 33 5.4 tr|B0WB34|B0WB34_CULQU Latent nuclear antigen OS=Culex quinquefa... 33 7.0 tr|Q6NU06|Q6NU06_XENLA MGC81364 protein OS=Xenopus laevis GN=nlk... 33 9.2 tr|B0JZD9|B0JZD9_XENTR Nlk protein OS=Xenopus tropicalis GN=nlk ... 33 9.2
>tr|B4I184|B4I184_DROSE GM18501 OS=Drosophila sechellia GN=GM18501 PE=4 SV=1 Length = 492
Score = 33.9 bits (76), Expect = 4.1 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -2
Query: 246 CSSAPELQCCVITLPYPFVKHPHTKRVACNTSHITSSTPILVGPTLAHWRQQQLRASCAP 67 C+ + E + + P P + T+ C+T T +TP PT + ++CAP Sbjct: 140 CTCSEEPSTAIPSSPCPCTEETTTQTPTCSTQG-TPTTPCTCAPTTTTTKCTTTTSTCAP 198
Query: 66 STCNPR 49 +T PR Sbjct: 199 TTTTPR 204
>tr|Q63N68|Q63N68_BURPS Putative O-acetyl transferase (O-antigen-related) OS=Burkholderia pseudomallei GN=BPSS0427 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|Q3JH33|Q3JH33_BURP1 Putative O-acetyl transferase (O-antigen-related) OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_A1969 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|A3P2Q4|A3P2Q4_BURP0 Putative lipopolysaccharide biosynthesis O-acetyl transferase OS=Burkholderia pseudomallei (strain 1106a) GN=BURPS1106A_A0578 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|A3NH49|A3NH49_BURP6 Galactoside O-acetyltransferase OS=Burkholderia pseudomallei (strain 668) GN=BURPS668_A0671 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|B7CX35|B7CX35_BURPS Putative lipopolysaccharide biosynthesis O-acetyl transferase OS=Burkholderia pseudomallei 576 GN=BUC_4753 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|B2KJA5|B2KJA5_BURPS Putative lipopolysaccharide biosynthesis O-acetyl transferase OS=Burkholderia pseudomallei 1655 GN=BURPS1655_0437 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|B1N1L5|B1N1L5_BURPS Putative acetyltransferase OS=Burkholderia pseudomallei S13 GN=BURPSS13_L0071 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|A8KHI6|A8KHI6_BURPS Putative acetyltransferase OS=Burkholderia pseudomallei Pasteur 52237 GN=BURPSPAST_D0383 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
>tr|A8EB87|A8EB87_BURPS Putative acetyltransferase OS=Burkholderia pseudomallei 406e GN=BURPS406E_O0137 PE=4 SV=1 Length = 189
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2
Query: 41 DIMRGLHVDGAHEARNCC*RQCASVGPTKIGVDDVICD---VLHATLLV*GC 187 D G DGAH A + R A V P +IG D ICD +L T L GC Sbjct: 109 DHAHGDSADGAHRAMSPARRPLARVEPIRIGDDCWICDGAVILAGTRLAPGC 160
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